RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 FBXL17Q9UF56 701 aa13.62□□□□□ -0.23
SMIM4-204ENST00000482728 KIR2DL5BA0A0G2JN68 375 aa13.61□□□□□ -0.23
SMIM4-204ENST00000482728 KIR2DL5BA0A0G2JPC4 375 aa13.61□□□□□ -0.23
SMIM4-204ENST00000482728 FAM24AA6NFZ4 105 aa13.61□□□□□ -0.23
SMIM4-204ENST00000482728 UBE2CO00762 179 aa13.61□□□□□ -0.23
SMIM4-204ENST00000482728 CST7O76096 145 aa13.61□□□□□ -0.23
SMIM4-204ENST00000482728 ARL16Q0P5N6 197 aa13.61□□□□□ -0.23
SMIM4-204ENST00000482728 ZNF124Q15973 351 aa13.61□□□□□ -0.23
SMIM4-204ENST00000482728 OR8I2Q8N0Y5 310 aa13.61□□□□□ -0.23
SMIM4-204ENST00000482728 KIR2DL5AQ8N109 375 aa13.61□□□□□ -0.23
SMIM4-204ENST00000482728 FAM24BQ8N5W8 94 aa13.61□□□□□ -0.23
SMIM4-204ENST00000482728 OR1B1Q8NGR6 318 aa13.61□□□□□ -0.23
SMIM4-204ENST00000482728 KIR2DL5BQ8NHK3 375 aa13.61□□□□□ -0.23
SMIM4-204ENST00000482728 DCANP1Q8TF63 244 aa13.61□□□□□ -0.23
SMIM4-204ENST00000482728 TMEM147Q9BVK8 224 aa13.61□□□□□ -0.23
SMIM4-204ENST00000482728 NRN1Q9NPD7 142 aa13.61□□□□□ -0.23
SMIM4-204ENST00000482728 ZNF688P0C7X2 276 aa13.6□□□□□ -0.23
SMIM4-204ENST00000482728 SLC38A11Q08AI6 406 aa13.6□□□□□ -0.23
SMIM4-204ENST00000482728 LEMD1Q68G75 181 aa13.6□□□□□ -0.23
SMIM4-204ENST00000482728 TMEM182Q6ZP80 229 aaPredicted RBP13.6□□□□□ -0.23
SMIM4-204ENST00000482728 STX12Q86Y82 276 aa13.6□□□□□ -0.23
SMIM4-204ENST00000482728 TMEM217Q8N7C4 229 aa13.6□□□□□ -0.23
SMIM4-204ENST00000482728 NMES1Q9C002 83 aa13.6□□□□□ -0.23
SMIM4-204ENST00000482728 C11orf1Q9H5F2 150 aa13.6□□□□□ -0.23
SMIM4-204ENST00000482728 SLC45A2Q9UMX9 530 aa13.6□□□□□ -0.23
SMIM4-204ENST00000482728 SNRPD3P62318 126 aaKnown RBP13.59□□□□□ -0.23
SMIM4-204ENST00000482728 LYRM2Q9NU23 88 aaPredicted RBP13.59□□□□□ -0.23
SMIM4-204ENST00000482728 HYPMO75409 117 aa13.58□□□□□ -0.24
SMIM4-204ENST00000482728 PTTG1O95997 202 aa13.58□□□□□ -0.24
SMIM4-204ENST00000482728 LINC00869P0C866 280 aa13.58□□□□□ -0.24
SMIM4-204ENST00000482728 S100A11P31949 105 aa13.58□□□□□ -0.24
SMIM4-204ENST00000482728 SULT1A1P50225 295 aa13.58□□□□□ -0.24
SMIM4-204ENST00000482728 RAP2BP61225 183 aa13.58□□□□□ -0.24
SMIM4-204ENST00000482728 HBG1P69891 147 aa13.58□□□□□ -0.24
SMIM4-204ENST00000482728 HBG2P69892 147 aa13.58□□□□□ -0.24
SMIM4-204ENST00000482728 RAB31Q13636 194 aa13.58□□□□□ -0.24
SMIM4-204ENST00000482728 Q6ZWC4 215 aa13.58□□□□□ -0.24
SMIM4-204ENST00000482728 S100A7AQ86SG5 101 aa13.58□□□□□ -0.24
SMIM4-204ENST00000482728 TMEM252Q8N6L7 170 aa13.58□□□□□ -0.24
SMIM4-204ENST00000482728 CSTL1Q9H114 145 aa13.58□□□□□ -0.24
SMIM4-204ENST00000482728 SLC25A22Q9H936 323 aa13.58□□□□□ -0.24
SMIM4-204ENST00000482728 DOK5Q9P104 306 aa13.58□□□□□ -0.24
SMIM4-204ENST00000482728 HUWE1Q7Z6Z7 4374 aaKnown RBP13.57□□□□□ -0.24
SMIM4-204ENST00000482728 ZNF98A6NK75 572 aa13.57□□□□□ -0.24
SMIM4-204ENST00000482728 OR5G3P0C626 314 aa13.57□□□□□ -0.24
SMIM4-204ENST00000482728 ID1P41134 155 aa13.57□□□□□ -0.24
SMIM4-204ENST00000482728 GALR1P47211 349 aa13.57□□□□□ -0.24
SMIM4-204ENST00000482728 LRRC37A5PQ49AS3 106 aa13.57□□□□□ -0.24
SMIM4-204ENST00000482728 PSMG4Q5JS54 123 aa13.57□□□□□ -0.24
SMIM4-204ENST00000482728 STHQ8IWL8 128 aa13.57□□□□□ -0.24
SMIM4-204ENST00000482728 SEPSECSQ9HD40 501 aaKnown RBP13.57□□□□□ -0.24
SMIM4-204ENST00000482728 UQCC1Q9NVA1 299 aa13.57□□□□□ -0.24
SMIM4-204ENST00000482728 HIGD1AQ9Y241 93 aa13.57□□□□□ -0.24
SMIM4-204ENST00000482728 IGSF23A1L1A6 192 aa13.56□□□□□ -0.24
SMIM4-204ENST00000482728 E5RGE8 158 aa13.56□□□□□ -0.24
SMIM4-204ENST00000482728 AGPAT2O15120 278 aa13.56□□□□□ -0.24
SMIM4-204ENST00000482728 SPRY2O43597 315 aa13.56□□□□□ -0.24
SMIM4-204ENST00000482728 ZNF546Q86UE3 836 aa13.56□□□□□ -0.24
SMIM4-204ENST00000482728 OVOL2Q9BRP0 275 aa13.56□□□□□ -0.24
SMIM4-204ENST00000482728 SLC25A31Q9H0C2 315 aa13.56□□□□□ -0.24
SMIM4-204ENST00000482728 ARL6Q9H0F7 186 aa13.56□□□□□ -0.24
SMIM4-204ENST00000482728 H2BFSP57053 126 aa13.55□□□□□ -0.24
SMIM4-204ENST00000482728 PLP1P60201 277 aa13.55□□□□□ -0.24
SMIM4-204ENST00000482728 ATP6V1FQ16864 119 aa13.55□□□□□ -0.24
SMIM4-204ENST00000482728 DEFB135Q30KP9 77 aa13.55□□□□□ -0.24
SMIM4-204ENST00000482728 PXDC1Q5TGL8 231 aa13.55□□□□□ -0.24
SMIM4-204ENST00000482728 GPR82Q96P67 336 aa13.55□□□□□ -0.24
SMIM4-204ENST00000482728 RSG1Q9BU20 258 aa13.55□□□□□ -0.24
SMIM4-204ENST00000482728 TP53TG1Q9Y2A0 90 aa13.55□□□□□ -0.24
SMIM4-204ENST00000482728 AGRNO00468 2067 aa13.55□□□□□ -0.24
SMIM4-204ENST00000482728 KNCNA6PVL3 124 aa13.54□□□□□ -0.24
SMIM4-204ENST00000482728 CAMLGP49069 296 aa13.54□□□□□ -0.24
SMIM4-204ENST00000482728 ACTL10Q5JWF8 245 aa13.54□□□□□ -0.24
SMIM4-204ENST00000482728 SAMD13Q5VXD3 122 aa13.54□□□□□ -0.24
SMIM4-204ENST00000482728 MUC7Q8TAX7 377 aa13.54□□□□□ -0.24
SMIM4-204ENST00000482728 PPP1R1CQ8WVI7 109 aa13.54□□□□□ -0.24
SMIM4-204ENST00000482728 LINC00052Q96N35 136 aa13.54□□□□□ -0.24
SMIM4-204ENST00000482728 SHANK2-AS3Q9BTD1 123 aa13.54□□□□□ -0.24
SMIM4-204ENST00000482728 SLC25A39Q9BZJ4 359 aaPredicted RBP13.54□□□□□ -0.24
SMIM4-204ENST00000482728 EDA2RQ9HAV5 297 aa13.54□□□□□ -0.24
SMIM4-204ENST00000482728 RNF24Q9Y225 148 aa13.54□□□□□ -0.24
SMIM4-204ENST00000482728 ALG5Q9Y673 324 aa13.54□□□□□ -0.24
SMIM4-204ENST00000482728 C3orf84H3BNL1 204 aa13.53□□□□□ -0.24
SMIM4-204ENST00000482728 MEOX2P50222 304 aa13.53□□□□□ -0.24
SMIM4-204ENST00000482728 RNF183Q96D59 192 aa13.53□□□□□ -0.24
SMIM4-204ENST00000482728 MGST2Q99735 147 aa13.53□□□□□ -0.24
SMIM4-204ENST00000482728 SCRT1Q9BWW7 348 aa13.53□□□□□ -0.24
SMIM4-204ENST00000482728 SLC25A32Q9H2D1 315 aa13.53□□□□□ -0.24
SMIM4-204ENST00000482728 OR5AC2Q9NZP5 309 aa13.53□□□□□ -0.24
SMIM4-204ENST00000482728 PET100P0DJ07 73 aa13.52□□□□□ -0.25
SMIM4-204ENST00000482728 NHLH2Q02577 135 aa13.52□□□□□ -0.25
SMIM4-204ENST00000482728 BAXQ07812 192 aa13.52□□□□□ -0.25
SMIM4-204ENST00000482728 Q6ZRG5 221 aa13.52□□□□□ -0.25
SMIM4-204ENST00000482728 WDR83OSQ9Y284 106 aa13.52□□□□□ -0.25
SMIM4-204ENST00000482728 UBE2L5PA0A1B0GUS4 154 aa13.51□□□□□ -0.25
SMIM4-204ENST00000482728 H0YIZ8 118 aa13.51□□□□□ -0.25
SMIM4-204ENST00000482728 H3BRN7 92 aa13.51□□□□□ -0.25
SMIM4-204ENST00000482728 ISLRO14498 428 aa13.51□□□□□ -0.25
SMIM4-204ENST00000482728 COX7A2P2O60397 106 aa13.51□□□□□ -0.25
SMIM4-204ENST00000482728 CA1P00915 261 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms