RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 SCRT1Q9BWW7 348 aa6.48□□□□□ -1.37
HLA-B-253ENST00000481849 RBKSQ9H477 322 aa6.48□□□□□ -1.37
HLA-B-253ENST00000481849 NRN1Q9NPD7 142 aa6.48□□□□□ -1.37
HLA-B-253ENST00000481849 MCUBQ9NWR8 336 aa6.48□□□□□ -1.37
HLA-B-253ENST00000481849 TMEM56-RWDD3S4R434 201 aa6.48□□□□□ -1.37
HLA-B-253ENST00000481849 DYNC1H1Q14204 4646 aaKnown RBP6.47□□□□□ -1.37
HLA-B-253ENST00000481849 IGHV3OR16-12A0A075B7B8 117 aa6.47□□□□□ -1.37
HLA-B-253ENST00000481849 DEFB131BA0A096LNP1 70 aa6.47□□□□□ -1.37
HLA-B-253ENST00000481849 BUB3O43684 328 aa6.47□□□□□ -1.37
HLA-B-253ENST00000481849 C12orf74Q32Q52 190 aa6.47□□□□□ -1.37
HLA-B-253ENST00000481849 NMSQ5H8A3 153 aa6.47□□□□□ -1.37
HLA-B-253ENST00000481849 LYZL2Q7Z4W2 148 aa6.47□□□□□ -1.37
HLA-B-253ENST00000481849 LGI3Q8N145 548 aa6.47□□□□□ -1.37
HLA-B-253ENST00000481849 DTD1Q8TEA8 209 aa6.47□□□□□ -1.37
HLA-B-253ENST00000481849 RNF125Q96EQ8 232 aa6.47□□□□□ -1.37
HLA-B-253ENST00000481849 PAIP2BQ9ULR5 123 aaKnown RBP6.47□□□□□ -1.37
HLA-B-253ENST00000481849 KCNIP3Q9Y2W7 256 aa6.47□□□□□ -1.37
HLA-B-253ENST00000481849 VPS13DQ5THJ4 4388 aa6.47□□□□□ -1.37
HLA-B-253ENST00000481849 HMCN2Q8NDA2 5059 aa6.47□□□□□ -1.37
HLA-B-253ENST00000481849 ZFP92A6NM28 416 aa6.46□□□□□ -1.38
HLA-B-253ENST00000481849 H3BMM0 161 aa6.46□□□□□ -1.38
HLA-B-253ENST00000481849 GSTZ1O43708 216 aaPredicted RBP6.46□□□□□ -1.38
HLA-B-253ENST00000481849 NUTF2P61970 127 aaKnown RBP6.46□□□□□ -1.38
HLA-B-253ENST00000481849 ZNF90Q03938 601 aa6.46□□□□□ -1.38
HLA-B-253ENST00000481849 OR2F1Q13607 317 aa6.46□□□□□ -1.38
HLA-B-253ENST00000481849 KLF9Q13886 244 aaPredicted RBP6.46□□□□□ -1.38
HLA-B-253ENST00000481849 SMCO1Q147U7 214 aa6.46□□□□□ -1.38
HLA-B-253ENST00000481849 GDF5OSQ5U4N7 250 aa6.46□□□□□ -1.38
HLA-B-253ENST00000481849 NOXA1Q86UR1 476 aa6.46□□□□□ -1.38
HLA-B-253ENST00000481849 OR1S1Q8NH92 325 aa6.46□□□□□ -1.38
HLA-B-253ENST00000481849 ZNF503Q96F45 646 aa6.46□□□□□ -1.38
HLA-B-253ENST00000481849 C1QTNF4Q9BXJ3 329 aa6.46□□□□□ -1.38
HLA-B-253ENST00000481849 MRPS26Q9BYN8 205 aaKnown RBP6.46□□□□□ -1.38
HLA-B-253ENST00000481849 ANKRD20A5PA0PJZ0 165 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 M0R2N4 97 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 CTDSPLO15194 276 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 IAPPP10997 89 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 HLA-DRB4P13762 266 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 ALDH3B2P48448 385 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 CCR6P51684 374 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 LYZP61626 148 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 GAMTQ14353 236 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 TMED4Q7Z7H5 227 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 OR4B1Q8NGF8 309 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 COQ8AQ8NI60 647 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 IL22RA2Q969J5 263 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 PPP1R14BQ96C90 147 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 SLC35E1Q96K37 410 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 RNF126Q9BV68 326 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 WDR12Q9GZL7 423 aaKnown RBP6.45□□□□□ -1.38
HLA-B-253ENST00000481849 HSPB7Q9UBY9 170 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 SCP2D1Q9UJQ7 156 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 U3KQ87 197 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 HLA-DRB4X5D2U9 266 aa6.45□□□□□ -1.38
HLA-B-253ENST00000481849 IGKV1D-37A0A075B6S9 117 aa6.44□□□□□ -1.38
HLA-B-253ENST00000481849 A0A0B4J2A0 478 aa6.44□□□□□ -1.38
HLA-B-253ENST00000481849 F6UB75 175 aa6.44□□□□□ -1.38
HLA-B-253ENST00000481849 HTN3P15516 51 aa6.44□□□□□ -1.38
HLA-B-253ENST00000481849 SUPT4H1P63272 117 aaKnown RBP6.44□□□□□ -1.38
HLA-B-253ENST00000481849 RNF151Q2KHN1 245 aa6.44□□□□□ -1.38
HLA-B-253ENST00000481849 DYNC2LI1Q8TCX1 351 aa6.44□□□□□ -1.38
HLA-B-253ENST00000481849 SCGB3A2Q96PL1 93 aa6.44□□□□□ -1.38
HLA-B-253ENST00000481849 NDUFAF3Q9BU61 184 aa6.44□□□□□ -1.38
HLA-B-253ENST00000481849 CCDC59Q9P031 241 aaKnown RBP6.44□□□□□ -1.38
HLA-B-253ENST00000481849 C11orf21Q9P2W6 132 aa6.44□□□□□ -1.38
HLA-B-253ENST00000481849 CACFD1Q9UGQ2 172 aa6.44□□□□□ -1.38
HLA-B-253ENST00000481849 RSL24D1Q9UHA3 163 aaKnown RBP6.44□□□□□ -1.38
HLA-B-253ENST00000481849 SHPKQ9UHJ6 478 aa6.44□□□□□ -1.38
HLA-B-253ENST00000481849 DNAH6Q9C0G6 4158 aa6.43□□□□□ -1.38
HLA-B-253ENST00000481849 FABP12A6NFH5 140 aa6.43□□□□□ -1.38
HLA-B-253ENST00000481849 SNRPGP15A8MWD9 76 aa6.43□□□□□ -1.38
HLA-B-253ENST00000481849 AMBPP02760 352 aa6.43□□□□□ -1.38
HLA-B-253ENST00000481849 SPART-AS1P0CW21 52 aa6.43□□□□□ -1.38
HLA-B-253ENST00000481849 ANXA3P12429 323 aa6.43□□□□□ -1.38
HLA-B-253ENST00000481849 TNFSF8P32971 234 aa6.43□□□□□ -1.38
HLA-B-253ENST00000481849 NUP62P37198 522 aaPredicted RBP6.43□□□□□ -1.38
HLA-B-253ENST00000481849 ID1P41134 155 aa6.43□□□□□ -1.38
HLA-B-253ENST00000481849 NKX2-1P43699 371 aaPredicted RBP6.43□□□□□ -1.38
HLA-B-253ENST00000481849 OR8G2PQ6IF36 304 aa6.43□□□□□ -1.38
HLA-B-253ENST00000481849 ZNF705AQ6ZN79 300 aaPredicted RBP6.43□□□□□ -1.38
HLA-B-253ENST00000481849 FOXI2Q6ZQN5 318 aa6.43□□□□□ -1.38
HLA-B-253ENST00000481849 POM121L12Q8N7R1 296 aa6.43□□□□□ -1.38
HLA-B-253ENST00000481849 MAGT1Q9H0U3 335 aa6.43□□□□□ -1.38
HLA-B-253ENST00000481849 SLC35B3Q9H1N7 401 aa6.43□□□□□ -1.38
HLA-B-253ENST00000481849 SAV1Q9H4B6 383 aaPredicted RBP6.43□□□□□ -1.38
HLA-B-253ENST00000481849 SEPSECSQ9HD40 501 aaKnown RBP6.43□□□□□ -1.38
HLA-B-253ENST00000481849 PFDN2Q9UHV9 154 aa6.43□□□□□ -1.38
HLA-B-253ENST00000481849 IGLV2-18A0A075B6J9 118 aa6.42□□□□□ -1.38
HLA-B-253ENST00000481849 NOL3O60936 208 aaKnown RBP6.42□□□□□ -1.38
HLA-B-253ENST00000481849 FABP1P07148 127 aa6.42□□□□□ -1.38
HLA-B-253ENST00000481849 P0DMU3 169 aa6.42□□□□□ -1.38
HLA-B-253ENST00000481849 FAM231AP0DMU4 169 aa6.42□□□□□ -1.38
HLA-B-253ENST00000481849 FAM231CP0DMU5 169 aa6.42□□□□□ -1.38
HLA-B-253ENST00000481849 GPX4P36969 197 aaPredicted RBP6.42□□□□□ -1.38
HLA-B-253ENST00000481849 PSMB3P49720 205 aa6.42□□□□□ -1.38
HLA-B-253ENST00000481849 SRPXP78539 464 aa6.42□□□□□ -1.38
HLA-B-253ENST00000481849 PYDC2Q56P42 97 aa6.42□□□□□ -1.38
HLA-B-253ENST00000481849 FAM222AQ5U5X8 452 aa6.42□□□□□ -1.38
HLA-B-253ENST00000481849 FAM78BQ5VT40 261 aa6.42□□□□□ -1.38
HLA-B-253ENST00000481849 EBLN2Q6P2I7 272 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms