RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 ZNF705GA8MUZ8 300 aaPredicted RBP7.89□□□□□ -1.15
TTC28-206ENST00000480563 SOCS3O14543 225 aa7.89□□□□□ -1.15
TTC28-206ENST00000480563 NXPH3O95157 252 aa7.89□□□□□ -1.15
TTC28-206ENST00000480563 PRM2P04554 102 aa7.89□□□□□ -1.15
TTC28-206ENST00000480563 AKAIN1P0CW23 69 aa7.89□□□□□ -1.15
TTC28-206ENST00000480563 NUP62P37198 522 aaPredicted RBP7.89□□□□□ -1.15
TTC28-206ENST00000480563 PAX9P55771 341 aa7.89□□□□□ -1.15
TTC28-206ENST00000480563 PIGPP57054 158 aa7.89□□□□□ -1.15
TTC28-206ENST00000480563 CLINT1Q14677 625 aa7.89□□□□□ -1.15
TTC28-206ENST00000480563 SP6Q3SY56 376 aa7.89□□□□□ -1.15
TTC28-206ENST00000480563 ETFRF1Q6IPR1 90 aa7.89□□□□□ -1.15
TTC28-206ENST00000480563 STEAP1BQ6NZ63 245 aa7.89□□□□□ -1.15
TTC28-206ENST00000480563 SSX7Q7RTT5 188 aa7.89□□□□□ -1.15
TTC28-206ENST00000480563 RNASE11Q8TAA1 199 aaKnown RBP7.89□□□□□ -1.15
TTC28-206ENST00000480563 ZNF486Q96H40 463 aaPredicted RBP7.89□□□□□ -1.15
TTC28-206ENST00000480563 ACY3Q96HD9 319 aa7.89□□□□□ -1.15
TTC28-206ENST00000480563 IGF2BP2-AS1Q96M15 143 aa7.89□□□□□ -1.15
TTC28-206ENST00000480563 PBDC1Q9BVG4 233 aa7.89□□□□□ -1.15
TTC28-206ENST00000480563 Q9H8V8 135 aa7.89□□□□□ -1.15
TTC28-206ENST00000480563 PFDN2Q9UHV9 154 aa7.89□□□□□ -1.15
TTC28-206ENST00000480563 CD3DP04234 171 aa7.88□□□□□ -1.15
TTC28-206ENST00000480563 BTF3P20290 206 aaKnown RBP7.88□□□□□ -1.15
TTC28-206ENST00000480563 FCN2Q15485 313 aa7.88□□□□□ -1.15
TTC28-206ENST00000480563 SCGB2B2Q4G0G5 96 aa7.88□□□□□ -1.15
TTC28-206ENST00000480563 TRIQKQ629K1 86 aa7.88□□□□□ -1.15
TTC28-206ENST00000480563 CCDC71LQ8N9Z2 235 aa7.88□□□□□ -1.15
TTC28-206ENST00000480563 SLC24A4Q8NFF2 622 aa7.88□□□□□ -1.15
TTC28-206ENST00000480563 OR52E5Q8NH55 327 aa7.88□□□□□ -1.15
TTC28-206ENST00000480563 RNF141Q8WVD5 230 aa7.88□□□□□ -1.15
TTC28-206ENST00000480563 GPR146Q96CH1 333 aa7.88□□□□□ -1.15
TTC28-206ENST00000480563 RNF125Q96EQ8 232 aa7.88□□□□□ -1.15
TTC28-206ENST00000480563 PRRT1Q99946 306 aa7.88□□□□□ -1.15
TTC28-206ENST00000480563 KRTAP1-5Q9BYS1 174 aa7.88□□□□□ -1.15
TTC28-206ENST00000480563 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.88□□□□□ -1.15
TTC28-206ENST00000480563 CBY3A6NI87 242 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 ISLRO14498 428 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 ATP5G1P05496 136 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 ATP5G3P48201 142 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 DLK1P80370 383 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 AARDQ4LEZ3 155 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 TTC32Q5I0X7 151 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 OR8G2PQ6IF36 304 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 CCDC190Q86UF4 302 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 TOMM5Q8N4H5 51 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 ZFAND1Q8TCF1 268 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 TMEM170AQ8WVE7 144 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 DEDD2Q8WXF8 326 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 RPRMQ9NS64 109 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 MCUBQ9NWR8 336 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 DOK5Q9P104 306 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 SCP2D1Q9UJQ7 156 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 C14orf166Q9Y224 244 aaKnown RBP7.87□□□□□ -1.15
TTC28-206ENST00000480563 V9GYH0 126 aa7.87□□□□□ -1.15
TTC28-206ENST00000480563 SRRM2Q9UQ35 2752 aaKnown RBP7.87□□□□□ -1.15
TTC28-206ENST00000480563 ANKRD20A5PA0PJZ0 165 aa7.86□□□□□ -1.15
TTC28-206ENST00000480563 CEBPZOSA8MTT3 80 aa7.86□□□□□ -1.15
TTC28-206ENST00000480563 AZU1P20160 251 aa7.86□□□□□ -1.15
TTC28-206ENST00000480563 UCP1P25874 307 aa7.86□□□□□ -1.15
TTC28-206ENST00000480563 C1orf194Q5T5A4 169 aa7.86□□□□□ -1.15
TTC28-206ENST00000480563 AMTNQ6UX39 209 aa7.86□□□□□ -1.15
TTC28-206ENST00000480563 FAM219AQ8IW50 185 aa7.86□□□□□ -1.15
TTC28-206ENST00000480563 LYPD1Q8N2G4 141 aa7.86□□□□□ -1.15
TTC28-206ENST00000480563 OR4C16Q8NGL9 310 aa7.86□□□□□ -1.15
TTC28-206ENST00000480563 C20orf173Q96LM9 149 aa7.86□□□□□ -1.15
TTC28-206ENST00000480563 SCGB3A2Q96PL1 93 aa7.86□□□□□ -1.15
TTC28-206ENST00000480563 COPZ2Q9P299 210 aa7.86□□□□□ -1.15
TTC28-206ENST00000480563 A8MTW9 85 aa7.85□□□□□ -1.15
TTC28-206ENST00000480563 INSP01308 110 aa7.85□□□□□ -1.15
TTC28-206ENST00000480563 TSPOP30536 169 aa7.85□□□□□ -1.15
TTC28-206ENST00000480563 XGP55808 180 aa7.85□□□□□ -1.15
TTC28-206ENST00000480563 SUPT4H1P63272 117 aaKnown RBP7.85□□□□□ -1.15
TTC28-206ENST00000480563 KLF9Q13886 244 aaPredicted RBP7.85□□□□□ -1.15
TTC28-206ENST00000480563 SURF2Q15527 256 aaPredicted RBP7.85□□□□□ -1.15
TTC28-206ENST00000480563 NOXA1Q86UR1 476 aa7.85□□□□□ -1.15
TTC28-206ENST00000480563 LHFPL1Q86WI0 220 aa7.85□□□□□ -1.15
TTC28-206ENST00000480563 OR8I2Q8N0Y5 310 aa7.85□□□□□ -1.15
TTC28-206ENST00000480563 TERB2Q8NHR7 220 aa7.85□□□□□ -1.15
TTC28-206ENST00000480563 C16orf92Q96LL3 132 aa7.85□□□□□ -1.15
TTC28-206ENST00000480563 UHRF2Q96PU4 802 aa7.85□□□□□ -1.15
TTC28-206ENST00000480563 SOSTQ9BQB4 213 aa7.85□□□□□ -1.15
TTC28-206ENST00000480563 Q9H3A6 140 aa7.85□□□□□ -1.15
TTC28-206ENST00000480563 PTTG2Q9NZH5 202 aa7.85□□□□□ -1.15
TTC28-206ENST00000480563 CACNG5Q9UF02 275 aa7.85□□□□□ -1.15
TTC28-206ENST00000480563 PLAC8L1A1L4L8 177 aa7.84□□□□□ -1.15
TTC28-206ENST00000480563 A6NHS1 94 aa7.84□□□□□ -1.15
TTC28-206ENST00000480563 ZFP92A6NM28 416 aa7.84□□□□□ -1.15
TTC28-206ENST00000480563 CENPXA8MT69 81 aa7.84□□□□□ -1.15
TTC28-206ENST00000480563 M0R2Z0 102 aa7.84□□□□□ -1.15
TTC28-206ENST00000480563 CRXO43186 299 aaPredicted RBP7.84□□□□□ -1.15
TTC28-206ENST00000480563 B3GALNT1O75752 331 aa7.84□□□□□ -1.15
TTC28-206ENST00000480563 CDS2O95674 445 aa7.84□□□□□ -1.15
TTC28-206ENST00000480563 B2MP61769 119 aa7.84□□□□□ -1.15
TTC28-206ENST00000480563 ZNF90Q03938 601 aa7.84□□□□□ -1.15
TTC28-206ENST00000480563 SPINK13Q1W4C9 94 aa7.84□□□□□ -1.15
TTC28-206ENST00000480563 CNPY1Q3B7I2 92 aa7.84□□□□□ -1.15
TTC28-206ENST00000480563 Q5VSD8 79 aa7.84□□□□□ -1.15
TTC28-206ENST00000480563 SAMD13Q5VXD3 122 aa7.84□□□□□ -1.15
TTC28-206ENST00000480563 LINC00299Q6ZSB3 139 aa7.84□□□□□ -1.15
TTC28-206ENST00000480563 OR4D10Q8NGI6 311 aa7.84□□□□□ -1.15
TTC28-206ENST00000480563 S100ZQ8WXG8 99 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms