RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 DOK5Q9P104 306 aa6.82□□□□□ -1.32
VCP-206ENST00000480327 SMPXQ9UHP9 88 aa6.82□□□□□ -1.32
VCP-206ENST00000480327 LCE6AA0A183 80 aa6.81□□□□□ -1.32
VCP-206ENST00000480327 G3V3Q6 166 aa6.81□□□□□ -1.32
VCP-206ENST00000480327 AGPAT2O15120 278 aa6.81□□□□□ -1.32
VCP-206ENST00000480327 HNRNPCP07910 306 aaKnown RBP eCLIP6.81□□□□□ -1.32
VCP-206ENST00000480327 FRMD6-AS1P0C7T7 363 aa6.81□□□□□ -1.32
VCP-206ENST00000480327 LINC00869P0C866 280 aa6.81□□□□□ -1.32
VCP-206ENST00000480327 CAMLGP49069 296 aa6.81□□□□□ -1.32
VCP-206ENST00000480327 GUCA2BQ16661 112 aa6.81□□□□□ -1.32
VCP-206ENST00000480327 VWC2Q2TAL6 325 aa6.81□□□□□ -1.32
VCP-206ENST00000480327 MIC13Q5XKP0 118 aa6.81□□□□□ -1.32
VCP-206ENST00000480327 TMEM61Q8N0U2 210 aa6.81□□□□□ -1.32
VCP-206ENST00000480327 INO80EQ8NBZ0 244 aaPredicted RBP6.81□□□□□ -1.32
VCP-206ENST00000480327 RNF2Q99496 336 aa6.81□□□□□ -1.32
VCP-206ENST00000480327 ATP5SQ99766 215 aa6.81□□□□□ -1.32
VCP-206ENST00000480327 WFDC1Q9HC57 220 aa6.81□□□□□ -1.32
VCP-206ENST00000480327 SIGLEC8Q9NYZ4 499 aa6.81□□□□□ -1.32
VCP-206ENST00000480327 TECRQ9NZ01 308 aaKnown RBP6.81□□□□□ -1.32
VCP-206ENST00000480327 RABAC1Q9UI14 185 aa6.81□□□□□ -1.32
VCP-206ENST00000480327 WDR83OSQ9Y284 106 aa6.81□□□□□ -1.32
VCP-206ENST00000480327 SMAD5-AS1Q9Y6J3 95 aa6.81□□□□□ -1.32
VCP-206ENST00000480327 ARPC5O15511 151 aa6.8□□□□□ -1.32
VCP-206ENST00000480327 DFFBO76075 338 aa6.8□□□□□ -1.32
VCP-206ENST00000480327 OR5G3P0C626 314 aa6.8□□□□□ -1.32
VCP-206ENST00000480327 GP9P14770 177 aa6.8□□□□□ -1.32
VCP-206ENST00000480327 CRYBB3P26998 211 aa6.8□□□□□ -1.32
VCP-206ENST00000480327 TFPI2P48307 235 aa6.8□□□□□ -1.32
VCP-206ENST00000480327 EIF2B2P49770 351 aaKnown RBP6.8□□□□□ -1.32
VCP-206ENST00000480327 SELENOTP62341 195 aa6.8□□□□□ -1.32
VCP-206ENST00000480327 RPL11P62913 178 aaKnown RBP6.8□□□□□ -1.32
VCP-206ENST00000480327 RAB31Q13636 194 aa6.8□□□□□ -1.32
VCP-206ENST00000480327 LCN12Q6JVE5 192 aa6.8□□□□□ -1.32
VCP-206ENST00000480327 RBPMS2Q6ZRY4 209 aaKnown RBP6.8□□□□□ -1.32
VCP-206ENST00000480327 TCF24Q7RTU0 167 aa6.8□□□□□ -1.32
VCP-206ENST00000480327 GBGT1Q8N5D6 347 aa6.8□□□□□ -1.32
VCP-206ENST00000480327 NARS2Q96I59 477 aaKnown RBP6.8□□□□□ -1.32
VCP-206ENST00000480327 ST6GAL2Q96JF0 529 aa6.8□□□□□ -1.32
VCP-206ENST00000480327 AQP10Q96PS8 301 aa6.8□□□□□ -1.32
VCP-206ENST00000480327 ARL6Q9H0F7 186 aa6.8□□□□□ -1.32
VCP-206ENST00000480327 FBXL17Q9UF56 701 aa6.8□□□□□ -1.32
VCP-206ENST00000480327 SLC45A2Q9UMX9 530 aa6.8□□□□□ -1.32
VCP-206ENST00000480327 TNFSF18Q9UNG2 199 aa6.8□□□□□ -1.32
VCP-206ENST00000480327 FRAS1Q86XX4 4008 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 A0A1W2PS18 150 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 RNF222A6NCQ9 220 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 ZNF785A8K8V0 405 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 IFNA5P01569 189 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 BMI1P35226 326 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 LEMD1Q68G75 181 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 AKAP14Q86UN6 197 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 WFDC3Q8IUB2 231 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 STPG3Q8N7X2 389 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 OR11H4Q8NGC9 324 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 OR2K2Q8NGT1 345 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 SCGB1C1Q8TD33 95 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 UHRF2Q96PU4 802 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 RSG1Q9BU20 258 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 GGTLC1Q9BX51 225 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 WDR61Q9GZS3 305 aaKnown RBP6.79□□□□□ -1.32
VCP-206ENST00000480327 TMEM231Q9H6L2 316 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 VSIRQ9H7M9 311 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 SLC25A22Q9H936 323 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 EDA2RQ9HAV5 297 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 RFNGQ9Y644 331 aa6.79□□□□□ -1.32
VCP-206ENST00000480327 HYPMO75409 117 aa6.78□□□□□ -1.32
VCP-206ENST00000480327 CFDP00746 253 aaPredicted RBP6.78□□□□□ -1.32
VCP-206ENST00000480327 CD300CQ08708 224 aa6.78□□□□□ -1.32
VCP-206ENST00000480327 OPCMLQ14982 345 aa6.78□□□□□ -1.32
VCP-206ENST00000480327 ZFAND6Q6FIF0 208 aa6.78□□□□□ -1.32
VCP-206ENST00000480327 LAMTOR1Q6IAA8 161 aa6.78□□□□□ -1.32
VCP-206ENST00000480327 C16orf54Q6UWD8 224 aa6.78□□□□□ -1.32
VCP-206ENST00000480327 PATE2Q6UY27 113 aa6.78□□□□□ -1.32
VCP-206ENST00000480327 Q8N1Y9 231 aa6.78□□□□□ -1.32
VCP-206ENST00000480327 ZNF709Q8N972 641 aa6.78□□□□□ -1.32
VCP-206ENST00000480327 GRAMD2BQ96HH9 432 aa6.78□□□□□ -1.32
VCP-206ENST00000480327 CITED4Q96RK1 184 aa6.78□□□□□ -1.32
VCP-206ENST00000480327 TM2D3Q9BRN9 247 aa6.78□□□□□ -1.32
VCP-206ENST00000480327 NPCDR1Q9BY65 106 aa6.78□□□□□ -1.32
VCP-206ENST00000480327 MFFQ9GZY8 342 aa6.78□□□□□ -1.32
VCP-206ENST00000480327 HIGD1AQ9Y241 93 aa6.78□□□□□ -1.32
VCP-206ENST00000480327 PXMP4Q9Y6I8 212 aa6.78□□□□□ -1.32
VCP-206ENST00000480327 U3KQE9 123 aa6.78□□□□□ -1.32
VCP-206ENST00000480327 BUB3O43684 328 aa6.77□□□□□ -1.33
VCP-206ENST00000480327 COX7A2P2O60397 106 aa6.77□□□□□ -1.33
VCP-206ENST00000480327 MPDU1O75352 247 aa6.77□□□□□ -1.33
VCP-206ENST00000480327 CD7P09564 240 aa6.77□□□□□ -1.33
VCP-206ENST00000480327 RPL29P47914 159 aaKnown RBP6.77□□□□□ -1.33
VCP-206ENST00000480327 B2MP61769 119 aa6.77□□□□□ -1.33
VCP-206ENST00000480327 PRR20EP86478 221 aa6.77□□□□□ -1.33
VCP-206ENST00000480327 PRR20CP86479 221 aa6.77□□□□□ -1.33
VCP-206ENST00000480327 PRR20DP86480 221 aa6.77□□□□□ -1.33
VCP-206ENST00000480327 PRR20BP86481 221 aa6.77□□□□□ -1.33
VCP-206ENST00000480327 PRR20AP86496 221 aa6.77□□□□□ -1.33
VCP-206ENST00000480327 GCSAMLQ5JQS6 135 aa6.77□□□□□ -1.33
VCP-206ENST00000480327 C10orf113Q5VZT2 155 aa6.77□□□□□ -1.33
VCP-206ENST00000480327 FAM90A2PQ658T7 463 aa6.77□□□□□ -1.33
VCP-206ENST00000480327 Q6ZRG5 221 aa6.77□□□□□ -1.33
VCP-206ENST00000480327 HSD17B11Q8NBQ5 300 aa6.77□□□□□ -1.33
VCP-206ENST00000480327 STXBP6Q8NFX7 210 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms