RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 HNRNPCP07910 306 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMARCD3-210ENST00000477169 CD7P09564 240 aa12.88□□□□□ -0.35
SMARCD3-210ENST00000477169 LYZP61626 148 aa12.88□□□□□ -0.35
SMARCD3-210ENST00000477169 SELENOTP62341 195 aa12.88□□□□□ -0.35
SMARCD3-210ENST00000477169 CLINT1Q14677 625 aa12.88□□□□□ -0.35
SMARCD3-210ENST00000477169 GUCA2BQ16661 112 aa12.88□□□□□ -0.35
SMARCD3-210ENST00000477169 TMEM61Q8N0U2 210 aa12.88□□□□□ -0.35
SMARCD3-210ENST00000477169 RNF2Q99496 336 aa12.88□□□□□ -0.35
SMARCD3-210ENST00000477169 PBDC1Q9BVG4 233 aa12.88□□□□□ -0.35
SMARCD3-210ENST00000477169 RABAC1Q9UI14 185 aa12.88□□□□□ -0.35
SMARCD3-210ENST00000477169 SLC45A2Q9UMX9 530 aa12.88□□□□□ -0.35
SMARCD3-210ENST00000477169 BMI1P35226 326 aa12.87□□□□□ -0.35
SMARCD3-210ENST00000477169 DEFB125Q8N687 156 aa12.87□□□□□ -0.35
SMARCD3-210ENST00000477169 FXYD6-FXYD2A0A087WZ82 144 aa12.86□□□□□ -0.35
SMARCD3-210ENST00000477169 TRAV25A0A0B4J276 109 aa12.86□□□□□ -0.35
SMARCD3-210ENST00000477169 A0A1W2PS18 150 aa12.86□□□□□ -0.35
SMARCD3-210ENST00000477169 OR11H12B2RN74 326 aa12.86□□□□□ -0.35
SMARCD3-210ENST00000477169 SMLR1H3BR10 107 aa12.86□□□□□ -0.35
SMARCD3-210ENST00000477169 EIF2B2P49770 351 aaKnown RBP12.86□□□□□ -0.35
SMARCD3-210ENST00000477169 FAM90A2PQ658T7 463 aa12.86□□□□□ -0.35
SMARCD3-210ENST00000477169 ZNF546Q86UE3 836 aa12.86□□□□□ -0.35
SMARCD3-210ENST00000477169 STPG3Q8N7X2 389 aa12.86□□□□□ -0.35
SMARCD3-210ENST00000477169 NARS2Q96I59 477 aaKnown RBP12.86□□□□□ -0.35
SMARCD3-210ENST00000477169 AQP10Q96PS8 301 aa12.86□□□□□ -0.35
SMARCD3-210ENST00000477169 TMEM231Q9H6L2 316 aa12.86□□□□□ -0.35
SMARCD3-210ENST00000477169 RYR2Q92736 4967 aa12.86□□□□□ -0.35
SMARCD3-210ENST00000477169 STARD9Q9P2P6 4700 aa12.86□□□□□ -0.35
SMARCD3-210ENST00000477169 LINC00869P0C866 280 aa12.85□□□□□ -0.35
SMARCD3-210ENST00000477169 FGF7P21781 194 aa12.85□□□□□ -0.35
SMARCD3-210ENST00000477169 CAMLGP49069 296 aa12.85□□□□□ -0.35
SMARCD3-210ENST00000477169 PLP1P60201 277 aa12.85□□□□□ -0.35
SMARCD3-210ENST00000477169 RAB31Q13636 194 aa12.85□□□□□ -0.35
SMARCD3-210ENST00000477169 LAMTOR1Q6IAA8 161 aa12.85□□□□□ -0.35
SMARCD3-210ENST00000477169 RBPMS2Q6ZRY4 209 aaKnown RBP12.85□□□□□ -0.35
SMARCD3-210ENST00000477169 ATP5SQ99766 215 aa12.85□□□□□ -0.35
SMARCD3-210ENST00000477169 GGTLC1Q9BX51 225 aa12.85□□□□□ -0.35
SMARCD3-210ENST00000477169 SMIM3Q9BZL3 60 aa12.85□□□□□ -0.35
SMARCD3-210ENST00000477169 SRD5A3Q9H8P0 318 aa12.85□□□□□ -0.35
SMARCD3-210ENST00000477169 WFDC1Q9HC57 220 aa12.85□□□□□ -0.35
SMARCD3-210ENST00000477169 CSMD3Q7Z407 3707 aa12.85□□□□□ -0.35
SMARCD3-210ENST00000477169 DYNC2H1Q8NCM8 4307 aaKnown RBP12.85□□□□□ -0.35
SMARCD3-210ENST00000477169 hCG_2014768A0A024R1R8 64 aa12.84□□□□□ -0.35
SMARCD3-210ENST00000477169 RBMY1BA6NDE4 496 aaKnown RBP12.84□□□□□ -0.35
SMARCD3-210ENST00000477169 RBMY1EA6NEQ0 496 aaKnown RBP12.84□□□□□ -0.35
SMARCD3-210ENST00000477169 TSPAN4O14817 238 aa12.84□□□□□ -0.35
SMARCD3-210ENST00000477169 DFFBO76075 338 aa12.84□□□□□ -0.35
SMARCD3-210ENST00000477169 RBMY1DP0C7P1 496 aaKnown RBP12.84□□□□□ -0.35
SMARCD3-210ENST00000477169 ORM2P19652 201 aa12.84□□□□□ -0.35
SMARCD3-210ENST00000477169 NUP62P37198 522 aaPredicted RBP12.84□□□□□ -0.35
SMARCD3-210ENST00000477169 C16orf54Q6UWD8 224 aa12.84□□□□□ -0.35
SMARCD3-210ENST00000477169 TCF24Q7RTU0 167 aa12.84□□□□□ -0.35
SMARCD3-210ENST00000477169 OR1B1Q8NGR6 318 aa12.84□□□□□ -0.35
SMARCD3-210ENST00000477169 GLMPQ8WWB7 406 aa12.84□□□□□ -0.35
SMARCD3-210ENST00000477169 TNFSF18Q9UNG2 199 aa12.84□□□□□ -0.35
SMARCD3-210ENST00000477169 BUB3O43684 328 aa12.83□□□□□ -0.36
SMARCD3-210ENST00000477169 MPDU1O75352 247 aa12.83□□□□□ -0.36
SMARCD3-210ENST00000477169 PRR20EP86478 221 aa12.83□□□□□ -0.36
SMARCD3-210ENST00000477169 PRR20CP86479 221 aa12.83□□□□□ -0.36
SMARCD3-210ENST00000477169 PRR20DP86480 221 aa12.83□□□□□ -0.36
SMARCD3-210ENST00000477169 PRR20BP86481 221 aa12.83□□□□□ -0.36
SMARCD3-210ENST00000477169 PRR20AP86496 221 aa12.83□□□□□ -0.36
SMARCD3-210ENST00000477169 OPCMLQ14982 345 aa12.83□□□□□ -0.36
SMARCD3-210ENST00000477169 MIC13Q5XKP0 118 aa12.83□□□□□ -0.36
SMARCD3-210ENST00000477169 ZFAND6Q6FIF0 208 aa12.83□□□□□ -0.36
SMARCD3-210ENST00000477169 GRAMD2BQ96HH9 432 aa12.83□□□□□ -0.36
SMARCD3-210ENST00000477169 ST6GAL2Q96JF0 529 aa12.83□□□□□ -0.36
SMARCD3-210ENST00000477169 WDR61Q9GZS3 305 aaKnown RBP12.83□□□□□ -0.36
SMARCD3-210ENST00000477169 WFDC10AQ9H1F0 79 aa12.83□□□□□ -0.36
SMARCD3-210ENST00000477169 DOK5Q9P104 306 aa12.83□□□□□ -0.36
SMARCD3-210ENST00000477169 A0A1B0GVG6 124 aa12.82□□□□□ -0.36
SMARCD3-210ENST00000477169 RNF222A6NCQ9 220 aa12.82□□□□□ -0.36
SMARCD3-210ENST00000477169 HYPMO75409 117 aa12.82□□□□□ -0.36
SMARCD3-210ENST00000477169 CD5P06127 495 aa12.82□□□□□ -0.36
SMARCD3-210ENST00000477169 RPL29P47914 159 aaKnown RBP12.82□□□□□ -0.36
SMARCD3-210ENST00000477169 PATE2Q6UY27 113 aa12.82□□□□□ -0.36
SMARCD3-210ENST00000477169 INO80EQ8NBZ0 244 aaPredicted RBP12.82□□□□□ -0.36
SMARCD3-210ENST00000477169 SPAG8Q99932 426 aaPredicted RBP12.82□□□□□ -0.36
SMARCD3-210ENST00000477169 NPCDR1Q9BY65 106 aa12.82□□□□□ -0.36
SMARCD3-210ENST00000477169 ARL6Q9H0F7 186 aa12.82□□□□□ -0.36
SMARCD3-210ENST00000477169 FBXL17Q9UF56 701 aa12.82□□□□□ -0.36
SMARCD3-210ENST00000477169 PFDN2Q9UHV9 154 aa12.82□□□□□ -0.36
SMARCD3-210ENST00000477169 SACSQ9NZJ4 4579 aa12.82□□□□□ -0.36
SMARCD3-210ENST00000477169 IGKV3-7A0A075B6H7 116 aa12.81□□□□□ -0.36
SMARCD3-210ENST00000477169 PXDC1Q5TGL8 231 aa12.81□□□□□ -0.36
SMARCD3-210ENST00000477169 PPP1R14BQ96C90 147 aa12.81□□□□□ -0.36
SMARCD3-210ENST00000477169 LYSTQ99698 3801 aa12.81□□□□□ -0.36
SMARCD3-210ENST00000477169 RETNQ9HD89 108 aa12.81□□□□□ -0.36
SMARCD3-210ENST00000477169 SLC39A9Q9NUM3 307 aa12.81□□□□□ -0.36
SMARCD3-210ENST00000477169 HIGD1AQ9Y241 93 aa12.81□□□□□ -0.36
SMARCD3-210ENST00000477169 IFNA5P01569 189 aa12.8□□□□□ -0.36
SMARCD3-210ENST00000477169 OR5G3P0C626 314 aa12.8□□□□□ -0.36
SMARCD3-210ENST00000477169 C1orf194Q5T5A4 169 aa12.8□□□□□ -0.36
SMARCD3-210ENST00000477169 GBGT1Q8N5D6 347 aa12.8□□□□□ -0.36
SMARCD3-210ENST00000477169 OR11H4Q8NGC9 324 aa12.8□□□□□ -0.36
SMARCD3-210ENST00000477169 PARD6GQ9BYG4 376 aaPredicted RBP12.8□□□□□ -0.36
SMARCD3-210ENST00000477169 SLC25A39Q9BZJ4 359 aaPredicted RBP12.8□□□□□ -0.36
SMARCD3-210ENST00000477169 PXMP4Q9Y6I8 212 aa12.8□□□□□ -0.36
SMARCD3-210ENST00000477169 TENM2Q9NT68 2774 aa12.8□□□□□ -0.36
SMARCD3-210ENST00000477169 ZNF98A6NK75 572 aa12.79□□□□□ -0.36
SMARCD3-210ENST00000477169 H3BRN7 92 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms