RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 TFPI2P48307 235 aa13.27□□□□□ -0.29
SMIM4-202ENST00000476842 PLP1P60201 277 aa13.27□□□□□ -0.29
SMIM4-202ENST00000476842 EWSR1Q01844 656 aaKnown RBP eCLIP13.27□□□□□ -0.29
SMIM4-202ENST00000476842 C1orf194Q5T5A4 169 aa13.27□□□□□ -0.29
SMIM4-202ENST00000476842 TMEM147Q9BVK8 224 aa13.27□□□□□ -0.29
SMIM4-202ENST00000476842 WDR83OSQ9Y284 106 aa13.27□□□□□ -0.29
SMIM4-202ENST00000476842 LYL1P12980 280 aa13.26□□□□□ -0.29
SMIM4-202ENST00000476842 BAXQ07812 192 aa13.26□□□□□ -0.29
SMIM4-202ENST00000476842 RAB31Q13636 194 aa13.26□□□□□ -0.29
SMIM4-202ENST00000476842 ODF3L2Q3SX64 289 aa13.26□□□□□ -0.29
SMIM4-202ENST00000476842 LINC00322Q6ZN03 302 aaPredicted RBP13.26□□□□□ -0.29
SMIM4-202ENST00000476842 WFDC3Q8IUB2 231 aa13.26□□□□□ -0.29
SMIM4-202ENST00000476842 ASB13Q8WXK3 278 aa13.26□□□□□ -0.29
SMIM4-202ENST00000476842 MGST2Q99735 147 aa13.26□□□□□ -0.29
SMIM4-202ENST00000476842 WFDC10AQ9H1F0 79 aa13.26□□□□□ -0.29
SMIM4-202ENST00000476842 LINC00869P0C866 280 aa13.25□□□□□ -0.29
SMIM4-202ENST00000476842 S100A7P31151 101 aa13.25□□□□□ -0.29
SMIM4-202ENST00000476842 SIGLEC15Q6ZMC9 328 aa13.25□□□□□ -0.29
SMIM4-202ENST00000476842 ZNF546Q86UE3 836 aa13.25□□□□□ -0.29
SMIM4-202ENST00000476842 SBSPONQ8IVN8 264 aa13.25□□□□□ -0.29
SMIM4-202ENST00000476842 OR5C1Q8NGR4 320 aa13.25□□□□□ -0.29
SMIM4-202ENST00000476842 OR1B1Q8NGR6 318 aa13.25□□□□□ -0.29
SMIM4-202ENST00000476842 PPP1R14BQ96C90 147 aa13.25□□□□□ -0.29
SMIM4-202ENST00000476842 ASCL2Q99929 193 aa13.25□□□□□ -0.29
SMIM4-202ENST00000476842 SRD5A3Q9H8P0 318 aa13.25□□□□□ -0.29
SMIM4-202ENST00000476842 FBXL17Q9UF56 701 aa13.25□□□□□ -0.29
SMIM4-202ENST00000476842 UBQLN2Q9UHD9 624 aa13.25□□□□□ -0.29
SMIM4-202ENST00000476842 K7EQG2 157 aa13.24□□□□□ -0.29
SMIM4-202ENST00000476842 HYPMO75409 117 aa13.24□□□□□ -0.29
SMIM4-202ENST00000476842 GIPP09681 153 aaPredicted RBP13.24□□□□□ -0.29
SMIM4-202ENST00000476842 RPL12P30050 165 aaKnown RBP13.24□□□□□ -0.29
SMIM4-202ENST00000476842 CAMLGP49069 296 aa13.24□□□□□ -0.29
SMIM4-202ENST00000476842 PXDC1Q5TGL8 231 aa13.24□□□□□ -0.29
SMIM4-202ENST00000476842 STXBP6Q8NFX7 210 aa13.24□□□□□ -0.29
SMIM4-202ENST00000476842 THAP6Q8TBB0 222 aa13.24□□□□□ -0.29
SMIM4-202ENST00000476842 DCANP1Q8TF63 244 aa13.24□□□□□ -0.29
SMIM4-202ENST00000476842 CHAC2Q8WUX2 184 aa13.24□□□□□ -0.29
SMIM4-202ENST00000476842 MBD2Q9UBB5 411 aa13.24□□□□□ -0.29
SMIM4-202ENST00000476842 TGP01266 2768 aa13.23□□□□□ -0.29
SMIM4-202ENST00000476842 RBMY1BA6NDE4 496 aaKnown RBP13.23□□□□□ -0.29
SMIM4-202ENST00000476842 RBMY1EA6NEQ0 496 aaKnown RBP13.23□□□□□ -0.29
SMIM4-202ENST00000476842 ZNF98A6NK75 572 aa13.23□□□□□ -0.29
SMIM4-202ENST00000476842 RBMY1DP0C7P1 496 aaKnown RBP13.23□□□□□ -0.29
SMIM4-202ENST00000476842 FGL1Q08830 312 aa13.23□□□□□ -0.29
SMIM4-202ENST00000476842 S100A7AQ86SG5 101 aa13.23□□□□□ -0.29
SMIM4-202ENST00000476842 CITED4Q96RK1 184 aa13.23□□□□□ -0.29
SMIM4-202ENST00000476842 ARL6Q9H0F7 186 aa13.23□□□□□ -0.29
SMIM4-202ENST00000476842 HIGD1AQ9Y241 93 aa13.23□□□□□ -0.29
SMIM4-202ENST00000476842 UBE2L5PA0A1B0GUS4 154 aa13.22□□□□□ -0.29
SMIM4-202ENST00000476842 MPDU1O75352 247 aa13.22□□□□□ -0.29
SMIM4-202ENST00000476842 RPL29P47914 159 aaKnown RBP13.22□□□□□ -0.29
SMIM4-202ENST00000476842 RAP2BP61225 183 aa13.22□□□□□ -0.29
SMIM4-202ENST00000476842 PATE2Q6UY27 113 aa13.22□□□□□ -0.29
SMIM4-202ENST00000476842 OR8I2Q8N0Y5 310 aa13.22□□□□□ -0.29
SMIM4-202ENST00000476842 GGTLC1Q9BX51 225 aa13.22□□□□□ -0.29
SMIM4-202ENST00000476842 SLC25A39Q9BZJ4 359 aaPredicted RBP13.22□□□□□ -0.29
SMIM4-202ENST00000476842 MAP6D1Q9H9H5 199 aa13.22□□□□□ -0.29
SMIM4-202ENST00000476842 NRN1Q9NPD7 142 aa13.22□□□□□ -0.29
SMIM4-202ENST00000476842 DOK5Q9P104 306 aa13.22□□□□□ -0.29
SMIM4-202ENST00000476842 HSPB11Q9Y547 144 aa13.22□□□□□ -0.29
SMIM4-202ENST00000476842 H3BRN7 92 aa13.21□□□□□ -0.29
SMIM4-202ENST00000476842 OR5G3P0C626 314 aa13.21□□□□□ -0.29
SMIM4-202ENST00000476842 FGF7P21781 194 aa13.21□□□□□ -0.29
SMIM4-202ENST00000476842 PRR20EP86478 221 aa13.21□□□□□ -0.29
SMIM4-202ENST00000476842 PRR20CP86479 221 aa13.21□□□□□ -0.29
SMIM4-202ENST00000476842 PRR20DP86480 221 aa13.21□□□□□ -0.29
SMIM4-202ENST00000476842 PRR20BP86481 221 aa13.21□□□□□ -0.29
SMIM4-202ENST00000476842 PRR20AP86496 221 aa13.21□□□□□ -0.29
SMIM4-202ENST00000476842 HAGHQ16775 308 aa13.21□□□□□ -0.29
SMIM4-202ENST00000476842 FAM24BQ8N5W8 94 aa13.21□□□□□ -0.29
SMIM4-202ENST00000476842 GPR82Q96P67 336 aa13.21□□□□□ -0.29
SMIM4-202ENST00000476842 SHANK2-AS3Q9BTD1 123 aa13.21□□□□□ -0.29
SMIM4-202ENST00000476842 SEPSECSQ9HD40 501 aaKnown RBP13.21□□□□□ -0.29
SMIM4-202ENST00000476842 ELOA3CA0A087WX78 387 aaPredicted RBP13.2□□□□□ -0.3
SMIM4-202ENST00000476842 CLINT1Q14677 625 aa13.2□□□□□ -0.3
SMIM4-202ENST00000476842 OPCMLQ14982 345 aa13.2□□□□□ -0.3
SMIM4-202ENST00000476842 Q6ZRG5 221 aa13.2□□□□□ -0.3
SMIM4-202ENST00000476842 APRG1Q8IVJ8 170 aa13.2□□□□□ -0.3
SMIM4-202ENST00000476842 ARV1Q9H2C2 271 aa13.2□□□□□ -0.3
SMIM4-202ENST00000476842 LOC102724200A0A096LPH7 203 aaPredicted RBP13.19□□□□□ -0.3
SMIM4-202ENST00000476842 GALR1P47211 349 aa13.19□□□□□ -0.3
SMIM4-202ENST00000476842 DEFB131AP59861 70 aa13.19□□□□□ -0.3
SMIM4-202ENST00000476842 Q5BKY6 102 aa13.19□□□□□ -0.3
SMIM4-202ENST00000476842 MIC13Q5XKP0 118 aa13.19□□□□□ -0.3
SMIM4-202ENST00000476842 ATP5SQ99766 215 aa13.19□□□□□ -0.3
SMIM4-202ENST00000476842 TM2D3Q9BRN9 247 aa13.19□□□□□ -0.3
SMIM4-202ENST00000476842 SCRT1Q9BWW7 348 aa13.19□□□□□ -0.3
SMIM4-202ENST00000476842 SLC25A32Q9H2D1 315 aa13.19□□□□□ -0.3
SMIM4-202ENST00000476842 SLC25A22Q9H936 323 aa13.19□□□□□ -0.3
SMIM4-202ENST00000476842 DNAJC4Q9NNZ3 241 aa13.19□□□□□ -0.3
SMIM4-202ENST00000476842 RNF24Q9Y225 148 aa13.19□□□□□ -0.3
SMIM4-202ENST00000476842 ZNF124Q15973 351 aa13.18□□□□□ -0.3
SMIM4-202ENST00000476842 LEMD1Q68G75 181 aa13.18□□□□□ -0.3
SMIM4-202ENST00000476842 TMEM37Q8WXS4 190 aa13.18□□□□□ -0.3
SMIM4-202ENST00000476842 UHRF2Q96PU4 802 aa13.18□□□□□ -0.3
SMIM4-202ENST00000476842 NPCDR1Q9BY65 106 aa13.18□□□□□ -0.3
SMIM4-202ENST00000476842 WDR61Q9GZS3 305 aaKnown RBP13.18□□□□□ -0.3
SMIM4-202ENST00000476842 SLC39A9Q9NUM3 307 aa13.18□□□□□ -0.3
SMIM4-202ENST00000476842 HUWE1Q7Z6Z7 4374 aaKnown RBP13.17□□□□□ -0.3
SMIM4-202ENST00000476842 COX7A2P2O60397 106 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms