RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 VAMP3Q15836 100 aa12.77□□□□□ -0.36
VARS2-207ENST00000476162 TIMD4Q96H15 378 aa12.77□□□□□ -0.36
VARS2-207ENST00000476162 MRPL18Q9H0U6 180 aaKnown RBP12.77□□□□□ -0.36
VARS2-207ENST00000476162 FBXL15Q9H469 300 aa12.77□□□□□ -0.36
VARS2-207ENST00000476162 HRNRQ86YZ3 2850 aaPredicted RBP12.77□□□□□ -0.37
VARS2-207ENST00000476162 NCOR2Q9Y618 2525 aa12.77□□□□□ -0.37
VARS2-207ENST00000476162 HELTA6NFD8 242 aa12.77□□□□□ -0.37
VARS2-207ENST00000476162 NBEAP1P0C6P0 100 aa12.77□□□□□ -0.37
VARS2-207ENST00000476162 CBLN1P23435 193 aa12.77□□□□□ -0.37
VARS2-207ENST00000476162 LGALS4P56470 323 aa12.77□□□□□ -0.37
VARS2-207ENST00000476162 ARF6P62330 175 aa12.77□□□□□ -0.37
VARS2-207ENST00000476162 C10orf113Q5VZT2 155 aa12.77□□□□□ -0.37
VARS2-207ENST00000476162 PVRIGQ6DKI7 326 aa12.77□□□□□ -0.37
VARS2-207ENST00000476162 LHFPL4Q7Z7J7 247 aa12.77□□□□□ -0.37
VARS2-207ENST00000476162 FAM103A1Q9BTL3 118 aaKnown RBP12.77□□□□□ -0.37
VARS2-207ENST00000476162 ZNF355PQ9NSJ1 428 aa12.77□□□□□ -0.37
VARS2-207ENST00000476162 ARHGAP32A7KAX9 2087 aa12.76□□□□□ -0.37
VARS2-207ENST00000476162 A0A1W2PRE2 83 aa12.76□□□□□ -0.37
VARS2-207ENST00000476162 ZNF253O75346 499 aa12.76□□□□□ -0.37
VARS2-207ENST00000476162 CRYGCP07315 174 aa12.76□□□□□ -0.37
VARS2-207ENST00000476162 UBE2L3P68036 154 aaKnown RBP12.76□□□□□ -0.37
VARS2-207ENST00000476162 OR1L4Q8NGR5 311 aa12.76□□□□□ -0.37
VARS2-207ENST00000476162 CHODLQ9H9P2 273 aa12.76□□□□□ -0.37
VARS2-207ENST00000476162 NRN1Q9NPD7 142 aa12.76□□□□□ -0.37
VARS2-207ENST00000476162 TBL2Q9Y4P3 447 aaKnown RBP12.76□□□□□ -0.37
VARS2-207ENST00000476162 IGHV3-21A0A0B4J1V1 117 aa12.76□□□□□ -0.37
VARS2-207ENST00000476162 FCN1O00602 326 aa12.76□□□□□ -0.37
VARS2-207ENST00000476162 MOSP00540 346 aa12.76□□□□□ -0.37
VARS2-207ENST00000476162 PYYP10082 97 aa12.76□□□□□ -0.37
VARS2-207ENST00000476162 GNG4P50150 75 aa12.76□□□□□ -0.37
VARS2-207ENST00000476162 CENPWQ5EE01 88 aa12.76□□□□□ -0.37
VARS2-207ENST00000476162 SMIM12Q96EX1 92 aa12.76□□□□□ -0.37
VARS2-207ENST00000476162 TNFRSF19Q9NS68 423 aa12.76□□□□□ -0.37
VARS2-207ENST00000476162 LY96Q9Y6Y9 160 aa12.76□□□□□ -0.37
VARS2-207ENST00000476162 TEX22C9J3V5 150 aa12.75□□□□□ -0.37
VARS2-207ENST00000476162 SLC17A3O00476 420 aa12.75□□□□□ -0.37
VARS2-207ENST00000476162 SPTBN1Q01082 2364 aaKnown RBP12.75□□□□□ -0.37
VARS2-207ENST00000476162 TIMM23O14925 209 aa12.74□□□□□ -0.37
VARS2-207ENST00000476162 PSG1P11464 419 aa12.74□□□□□ -0.37
VARS2-207ENST00000476162 NEU4Q8WWR8 484 aaPredicted RBP12.74□□□□□ -0.37
VARS2-207ENST00000476162 HTR1DP28221 377 aa12.74□□□□□ -0.37
VARS2-207ENST00000476162 OR4F17Q8NGA8 305 aa12.74□□□□□ -0.37
VARS2-207ENST00000476162 PAXXQ9BUH6 204 aa12.74□□□□□ -0.37
VARS2-207ENST00000476162 NDUFS8O00217 210 aa12.73□□□□□ -0.37
VARS2-207ENST00000476162 ORM2P19652 201 aa12.73□□□□□ -0.37
VARS2-207ENST00000476162 PLGLAQ15195 96 aa12.73□□□□□ -0.37
VARS2-207ENST00000476162 LINC00305Q7Z4B0 112 aa12.73□□□□□ -0.37
VARS2-207ENST00000476162 TMEM116Q8NCL8 245 aa12.73□□□□□ -0.37
VARS2-207ENST00000476162 IGFBPL1Q8WX77 278 aa12.73□□□□□ -0.37
VARS2-207ENST00000476162 SRSF12Q8WXF0 261 aaKnown RBP12.73□□□□□ -0.37
VARS2-207ENST00000476162 SSBP3Q9BWW4 388 aaPredicted RBP12.73□□□□□ -0.37
VARS2-207ENST00000476162 HILPDAQ9Y5L2 63 aa12.73□□□□□ -0.37
VARS2-207ENST00000476162 F11RQ9Y624 299 aaKnown RBP12.73□□□□□ -0.37
VARS2-207ENST00000476162 A0A1W2PPR1 153 aa12.73□□□□□ -0.37
VARS2-207ENST00000476162 K7ERU9 68 aa12.73□□□□□ -0.37
VARS2-207ENST00000476162 KLRD1Q13241 179 aa12.73□□□□□ -0.37
VARS2-207ENST00000476162 OR11H6Q8NGC7 330 aa12.73□□□□□ -0.37
VARS2-207ENST00000476162 RNF5Q99942 180 aa12.73□□□□□ -0.37
VARS2-207ENST00000476162 WNT10AQ9GZT5 417 aa12.73□□□□□ -0.37
VARS2-207ENST00000476162 IL36BQ9NZH7 164 aa12.73□□□□□ -0.37
VARS2-207ENST00000476162 DPM3Q9P2X0 92 aa12.73□□□□□ -0.37
VARS2-207ENST00000476162 TRAV9-1A0A075B6T8 112 aa12.72□□□□□ -0.37
VARS2-207ENST00000476162 C3orf79P0CE67 100 aa12.72□□□□□ -0.37
VARS2-207ENST00000476162 OR1B1Q8NGR6 318 aa12.72□□□□□ -0.37
VARS2-207ENST00000476162 TRGV9Q99603 122 aa12.72□□□□□ -0.37
VARS2-207ENST00000476162 GNB4Q9HAV0 340 aa12.72□□□□□ -0.37
VARS2-207ENST00000476162 ABCA1O95477 2261 aa12.72□□□□□ -0.37
VARS2-207ENST00000476162 HIVEP3Q5T1R4 2406 aa12.72□□□□□ -0.37
VARS2-207ENST00000476162 CORTO00230 105 aa12.72□□□□□ -0.37
VARS2-207ENST00000476162 AMTP48728 403 aa12.72□□□□□ -0.37
VARS2-207ENST00000476162 PRR27Q6MZM9 219 aa12.72□□□□□ -0.37
VARS2-207ENST00000476162 TIGITQ495A1 244 aa12.71□□□□□ -0.37
VARS2-207ENST00000476162 DTX2Q86UW9 622 aa12.71□□□□□ -0.37
VARS2-207ENST00000476162 FXYD5Q96DB9 178 aa12.71□□□□□ -0.37
VARS2-207ENST00000476162 LINC00479Q96M42 142 aa12.71□□□□□ -0.37
VARS2-207ENST00000476162 V9GYV3 84 aa12.71□□□□□ -0.37
VARS2-207ENST00000476162 A0A1W2PRD5 423 aa12.7□□□□□ -0.38
VARS2-207ENST00000476162 A0A1W2PRF3 423 aa12.7□□□□□ -0.38
VARS2-207ENST00000476162 A0A1W2PRM7 423 aa12.7□□□□□ -0.38
VARS2-207ENST00000476162 A0A1W2PS18 150 aa12.7□□□□□ -0.38
VARS2-207ENST00000476162 CD24P25063 80 aa12.7□□□□□ -0.38
VARS2-207ENST00000476162 ERASQ7Z444 233 aa12.7□□□□□ -0.38
VARS2-207ENST00000476162 NIT1Q86X76 327 aa12.7□□□□□ -0.38
VARS2-207ENST00000476162 RNASE7Q9H1E1 156 aaKnown RBP12.7□□□□□ -0.38
VARS2-207ENST00000476162 M0R1W7 72 aa12.7□□□□□ -0.38
VARS2-207ENST00000476162 TAX1BP3O14907 124 aa12.7□□□□□ -0.38
VARS2-207ENST00000476162 CNIH1O95406 144 aa12.7□□□□□ -0.38
VARS2-207ENST00000476162 IGLV2-8P01709 118 aa12.7□□□□□ -0.38
VARS2-207ENST00000476162 PRTN3P24158 256 aa12.7□□□□□ -0.38
VARS2-207ENST00000476162 CFHR4Q92496 578 aa12.7□□□□□ -0.38
VARS2-207ENST00000476162 PERPQ96FX8 193 aa12.7□□□□□ -0.38
VARS2-207ENST00000476162 IGF2BP2-AS1Q96M15 143 aa12.7□□□□□ -0.38
VARS2-207ENST00000476162 NDUFS7O75251 213 aa12.69□□□□□ -0.38
VARS2-207ENST00000476162 KCNS1Q96KK3 526 aa12.69□□□□□ -0.38
VARS2-207ENST00000476162 BMI1P35226 326 aa12.69□□□□□ -0.38
VARS2-207ENST00000476162 CEACAM3P40198 252 aa12.69□□□□□ -0.38
VARS2-207ENST00000476162 PAX2Q02962 417 aa12.69□□□□□ -0.38
VARS2-207ENST00000476162 ZNF329Q86UD4 541 aa12.69□□□□□ -0.38
VARS2-207ENST00000476162 PRORYQ9H606 182 aa12.69□□□□□ -0.38
VARS2-207ENST00000476162 ODF3BA8MYP8 253 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms