RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 GATA2P23769 480 aaPredicted RBP12.63□□□□□ -0.39
SCAF11-206ENST00000474828 CD81P60033 236 aa12.63□□□□□ -0.39
SCAF11-206ENST00000474828 PRR20EP86478 221 aa12.63□□□□□ -0.39
SCAF11-206ENST00000474828 PRR20CP86479 221 aa12.63□□□□□ -0.39
SCAF11-206ENST00000474828 PRR20DP86480 221 aa12.63□□□□□ -0.39
SCAF11-206ENST00000474828 PRR20BP86481 221 aa12.63□□□□□ -0.39
SCAF11-206ENST00000474828 PRR20AP86496 221 aa12.63□□□□□ -0.39
SCAF11-206ENST00000474828 OR2F1Q13607 317 aa12.63□□□□□ -0.39
SCAF11-206ENST00000474828 ZNF546Q86UE3 836 aa12.63□□□□□ -0.39
SCAF11-206ENST00000474828 PFDN2Q9UHV9 154 aa12.63□□□□□ -0.39
SCAF11-206ENST00000474828 SELENOKQ9Y6D0 94 aa12.63□□□□□ -0.39
SCAF11-206ENST00000474828 IGHV3-66A0A0C4DH42 116 aa12.62□□□□□ -0.39
SCAF11-206ENST00000474828 HELTA6NFD8 242 aa12.62□□□□□ -0.39
SCAF11-206ENST00000474828 G3V3Q6 166 aa12.62□□□□□ -0.39
SCAF11-206ENST00000474828 MPDU1O75352 247 aa12.62□□□□□ -0.39
SCAF11-206ENST00000474828 AP2S1P53680 142 aaPredicted RBP12.62□□□□□ -0.39
SCAF11-206ENST00000474828 ODF3L2Q3SX64 289 aa12.62□□□□□ -0.39
SCAF11-206ENST00000474828 OR5C1Q8NGR4 320 aa12.62□□□□□ -0.39
SCAF11-206ENST00000474828 DCANP1Q8TF63 244 aa12.62□□□□□ -0.39
SCAF11-206ENST00000474828 MS4A6AQ9H2W1 248 aa12.62□□□□□ -0.39
SCAF11-206ENST00000474828 SEPSECSQ9HD40 501 aaKnown RBP12.62□□□□□ -0.39
SCAF11-206ENST00000474828 RPL12P30050 165 aaKnown RBP12.61□□□□□ -0.39
SCAF11-206ENST00000474828 RPL29P47914 159 aaKnown RBP12.61□□□□□ -0.39
SCAF11-206ENST00000474828 LYZP61626 148 aa12.61□□□□□ -0.39
SCAF11-206ENST00000474828 FGL1Q08830 312 aa12.61□□□□□ -0.39
SCAF11-206ENST00000474828 OPCMLQ14982 345 aa12.61□□□□□ -0.39
SCAF11-206ENST00000474828 Q5BKY6 102 aa12.61□□□□□ -0.39
SCAF11-206ENST00000474828 DEFB121Q5J5C9 76 aa12.61□□□□□ -0.39
SCAF11-206ENST00000474828 PATE2Q6UY27 113 aa12.61□□□□□ -0.39
SCAF11-206ENST00000474828 GGTLC1Q9BX51 225 aa12.61□□□□□ -0.39
SCAF11-206ENST00000474828 HSPB11Q9Y547 144 aa12.61□□□□□ -0.39
SCAF11-206ENST00000474828 OR11H12B2RN74 326 aa12.6□□□□□ -0.39
SCAF11-206ENST00000474828 K7EQG2 157 aa12.6□□□□□ -0.39
SCAF11-206ENST00000474828 FRMD6-AS1P0C7T7 363 aa12.6□□□□□ -0.39
SCAF11-206ENST00000474828 CAMLGP49069 296 aa12.6□□□□□ -0.39
SCAF11-206ENST00000474828 CMC4P56277 68 aaPredicted RBP12.6□□□□□ -0.39
SCAF11-206ENST00000474828 PAFAH1B2P68402 229 aa12.6□□□□□ -0.39
SCAF11-206ENST00000474828 THAP6Q8TBB0 222 aa12.6□□□□□ -0.39
SCAF11-206ENST00000474828 AQP10Q96PS8 301 aa12.6□□□□□ -0.39
SCAF11-206ENST00000474828 PBDC1Q9BVG4 233 aa12.6□□□□□ -0.39
SCAF11-206ENST00000474828 FBXL17Q9UF56 701 aa12.6□□□□□ -0.39
SCAF11-206ENST00000474828 ZNF98A6NK75 572 aa12.59□□□□□ -0.39
SCAF11-206ENST00000474828 H3BRN7 92 aa12.59□□□□□ -0.39
SCAF11-206ENST00000474828 HYPMO75409 117 aa12.59□□□□□ -0.39
SCAF11-206ENST00000474828 S100A7P31151 101 aa12.59□□□□□ -0.39
SCAF11-206ENST00000474828 RAB31Q13636 194 aa12.59□□□□□ -0.39
SCAF11-206ENST00000474828 C17orf77Q96MU5 243 aa12.59□□□□□ -0.39
SCAF11-206ENST00000474828 SHANK2-AS3Q9BTD1 123 aa12.59□□□□□ -0.39
SCAF11-206ENST00000474828 PARD6GQ9BYG4 376 aaPredicted RBP12.59□□□□□ -0.39
SCAF11-206ENST00000474828 ORM2P19652 201 aa12.58□□□□□ -0.4
SCAF11-206ENST00000474828 SIGLEC15Q6ZMC9 328 aa12.58□□□□□ -0.4
SCAF11-206ENST00000474828 Q6ZNX1 250 aa12.58□□□□□ -0.4
SCAF11-206ENST00000474828 DEFB125Q8N687 156 aa12.58□□□□□ -0.4
SCAF11-206ENST00000474828 TMEM37Q8WXS4 190 aa12.58□□□□□ -0.4
SCAF11-206ENST00000474828 GPR82Q96P67 336 aa12.58□□□□□ -0.4
SCAF11-206ENST00000474828 CITED4Q96RK1 184 aa12.58□□□□□ -0.4
SCAF11-206ENST00000474828 SLC25A39Q9BZJ4 359 aaPredicted RBP12.58□□□□□ -0.4
SCAF11-206ENST00000474828 WDR61Q9GZS3 305 aaKnown RBP12.58□□□□□ -0.4
SCAF11-206ENST00000474828 NRN1Q9NPD7 142 aa12.58□□□□□ -0.4
SCAF11-206ENST00000474828 HUWE1Q7Z6Z7 4374 aaKnown RBP12.58□□□□□ -0.4
SCAF11-206ENST00000474828 ELOA3CA0A087WX78 387 aaPredicted RBP12.57□□□□□ -0.4
SCAF11-206ENST00000474828 UBE2L5PA0A1B0GUS4 154 aa12.57□□□□□ -0.4
SCAF11-206ENST00000474828 NHLRC4P0CG21 123 aaPredicted RBP12.57□□□□□ -0.4
SCAF11-206ENST00000474828 ATP5SQ99766 215 aa12.57□□□□□ -0.4
SCAF11-206ENST00000474828 NPCDR1Q9BY65 106 aa12.57□□□□□ -0.4
SCAF11-206ENST00000474828 WFDC10AQ9H1F0 79 aa12.57□□□□□ -0.4
SCAF11-206ENST00000474828 MAP6D1Q9H9H5 199 aa12.57□□□□□ -0.4
SCAF11-206ENST00000474828 HIGD1AQ9Y241 93 aa12.57□□□□□ -0.4
SCAF11-206ENST00000474828 RBMY1BA6NDE4 496 aaKnown RBP12.56□□□□□ -0.4
SCAF11-206ENST00000474828 RBMY1EA6NEQ0 496 aaKnown RBP12.56□□□□□ -0.4
SCAF11-206ENST00000474828 SOCS3O14543 225 aa12.56□□□□□ -0.4
SCAF11-206ENST00000474828 RBMY1DP0C7P1 496 aaKnown RBP12.56□□□□□ -0.4
SCAF11-206ENST00000474828 S100A7AQ86SG5 101 aa12.56□□□□□ -0.4
SCAF11-206ENST00000474828 FAM24BQ8N5W8 94 aa12.56□□□□□ -0.4
SCAF11-206ENST00000474828 OR1B1Q8NGR6 318 aa12.56□□□□□ -0.4
SCAF11-206ENST00000474828 OR2T35Q8NGX2 323 aa12.56□□□□□ -0.4
SCAF11-206ENST00000474828 ARL6Q9H0F7 186 aa12.56□□□□□ -0.4
SCAF11-206ENST00000474828 ARV1Q9H2C2 271 aa12.56□□□□□ -0.4
SCAF11-206ENST00000474828 RNF24Q9Y225 148 aa12.56□□□□□ -0.4
SCAF11-206ENST00000474828 MRPS12O15235 138 aaKnown RBP12.55□□□□□ -0.4
SCAF11-206ENST00000474828 FGF7P21781 194 aa12.55□□□□□ -0.4
SCAF11-206ENST00000474828 CLINT1Q14677 625 aa12.55□□□□□ -0.4
SCAF11-206ENST00000474828 MIC13Q5XKP0 118 aa12.55□□□□□ -0.4
SCAF11-206ENST00000474828 SBSPONQ8IVN8 264 aa12.55□□□□□ -0.4
SCAF11-206ENST00000474828 GBGT1Q8N5D6 347 aa12.55□□□□□ -0.4
SCAF11-206ENST00000474828 TM2D3Q9BRN9 247 aa12.55□□□□□ -0.4
SCAF11-206ENST00000474828 SCRT1Q9BWW7 348 aa12.55□□□□□ -0.4
SCAF11-206ENST00000474828 SLC25A32Q9H2D1 315 aa12.55□□□□□ -0.4
SCAF11-206ENST00000474828 WFDC1Q9HC57 220 aa12.55□□□□□ -0.4
SCAF11-206ENST00000474828 DNAJC4Q9NNZ3 241 aa12.55□□□□□ -0.4
SCAF11-206ENST00000474828 SLC39A9Q9NUM3 307 aa12.55□□□□□ -0.4
SCAF11-206ENST00000474828 TNFSF18Q9UNG2 199 aa12.55□□□□□ -0.4
SCAF11-206ENST00000474828 RNF222A6NCQ9 220 aa12.54□□□□□ -0.4
SCAF11-206ENST00000474828 DNASE2O00115 360 aaPredicted RBP12.54□□□□□ -0.4
SCAF11-206ENST00000474828 SAMD13Q5VXD3 122 aa12.54□□□□□ -0.4
SCAF11-206ENST00000474828 Q6ZRG5 221 aa12.54□□□□□ -0.4
SCAF11-206ENST00000474828 OR8I2Q8N0Y5 310 aa12.54□□□□□ -0.4
SCAF11-206ENST00000474828 STXBP6Q8NFX7 210 aa12.54□□□□□ -0.4
SCAF11-206ENST00000474828 SRD5A3Q9H8P0 318 aa12.54□□□□□ -0.4
SCAF11-206ENST00000474828 PXMP4Q9Y6I8 212 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms