RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 IFNA7P01567 189 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 M6PRP20645 277 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 BMI1P35226 326 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 CDC34P49427 236 aaPredicted RBP6.38□□□□□ -1.39
CNN3-205ENST00000474409 PLP1P60201 277 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 RHOBP62745 196 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 GCSAMLQ5JQS6 135 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 FAM74A1Q5RGS3 127 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 FAM122CQ6P4D5 195 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 LINC00305Q7Z4B0 112 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 OR10G4Q8NGN3 311 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 OR10G9Q8NGN4 311 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 OR10G7Q8NGN6 311 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 OR9G4Q8NGQ1 327 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 GATAD1Q8WUU5 269 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 GRAMD2BQ96HH9 432 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 UHRF2Q96PU4 802 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 RNF2Q99496 336 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 MRPL32Q9BYC8 188 aaKnown RBP6.38□□□□□ -1.39
CNN3-205ENST00000474409 VSIRQ9H7M9 311 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 SLC25A22Q9H936 323 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 PFDN2Q9UHV9 154 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 SORL1Q92673 2214 aa6.38□□□□□ -1.39
CNN3-205ENST00000474409 IGHV3-49A0A0A0MS15 119 aa6.37□□□□□ -1.39
CNN3-205ENST00000474409 A0A1W2PPV4 95 aa6.37□□□□□ -1.39
CNN3-205ENST00000474409 LGALS9O00182 355 aa6.37□□□□□ -1.39
CNN3-205ENST00000474409 OVOL1O14753 267 aa6.37□□□□□ -1.39
CNN3-205ENST00000474409 NPPCP23582 126 aa6.37□□□□□ -1.39
CNN3-205ENST00000474409 FAM78BQ5VT40 261 aa6.37□□□□□ -1.39
CNN3-205ENST00000474409 FAM213BQ8TBF2 198 aa6.37□□□□□ -1.39
CNN3-205ENST00000474409 DYNLRB2Q8TF09 96 aa6.37□□□□□ -1.39
CNN3-205ENST00000474409 TMEM37Q8WXS4 190 aa6.37□□□□□ -1.39
CNN3-205ENST00000474409 DLX4Q92988 240 aaPredicted RBP6.37□□□□□ -1.39
CNN3-205ENST00000474409 ZNF414Q96IQ9 312 aa6.37□□□□□ -1.39
CNN3-205ENST00000474409 SCRT1Q9BWW7 348 aa6.37□□□□□ -1.39
CNN3-205ENST00000474409 TMEM231Q9H6L2 316 aa6.37□□□□□ -1.39
CNN3-205ENST00000474409 DNAJC4Q9NNZ3 241 aa6.37□□□□□ -1.39
CNN3-205ENST00000474409 UBQLN2Q9UHD9 624 aa6.37□□□□□ -1.39
CNN3-205ENST00000474409 RNF24Q9Y225 148 aa6.37□□□□□ -1.39
CNN3-205ENST00000474409 IGHV3OR16-13A0A075B7E8 117 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 IGHV3-74A0A0B4J1X5 117 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 IGHV3-66A0A0C4DH42 116 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 IGHV7-4-1A0A0J9YVY3 117 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 A0A1W2PS18 150 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 TMEM213A2RRL7 107 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 C2orf70A6NJV1 201 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 H3BRN7 92 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 K7EMT4 169 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 SULT1A2P50226 295 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 RAB5CP51148 216 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 TAS2R45P59539 299 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 KLF5Q13887 457 aaPredicted RBP6.36□□□□□ -1.39
CNN3-205ENST00000474409 TM4SF20Q53R12 229 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 KHDC3LQ587J8 217 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 SPATA31B1PQ5VZV4 182 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 TEX261Q6UWH6 196 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 PATE2Q6UY27 113 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 DPPA3Q6W0C5 159 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 RNF141Q8WVD5 230 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 MDFIQ99750 246 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 SHANK2-AS3Q9BTD1 123 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 ELOVL1Q9BW60 279 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 SLC25A39Q9BZJ4 359 aaPredicted RBP6.36□□□□□ -1.39
CNN3-205ENST00000474409 ACTR3CQ9C0K3 210 aaPredicted RBP6.36□□□□□ -1.39
CNN3-205ENST00000474409 RPRMQ9NS64 109 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 MRPL27Q9P0M9 148 aaKnown RBP6.36□□□□□ -1.39
CNN3-205ENST00000474409 FUT9Q9Y231 359 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 STAB1Q9NY15 2570 aa6.36□□□□□ -1.39
CNN3-205ENST00000474409 TENM1Q9UKZ4 2725 aa6.35□□□□□ -1.39
CNN3-205ENST00000474409 CTXND1A0A1B0GTU2 59 aa6.35□□□□□ -1.39
CNN3-205ENST00000474409 MAP1LC3B2A6NCE7 125 aa6.35□□□□□ -1.39
CNN3-205ENST00000474409 ZNF98A6NK75 572 aa6.35□□□□□ -1.39
CNN3-205ENST00000474409 ZNF705EA8MWA4 302 aaPredicted RBP6.35□□□□□ -1.39
CNN3-205ENST00000474409 OR7C2O60412 319 aa6.35□□□□□ -1.39
CNN3-205ENST00000474409 CD33P20138 364 aa6.35□□□□□ -1.39
CNN3-205ENST00000474409 EDN2P20800 178 aa6.35□□□□□ -1.39
CNN3-205ENST00000474409 CRYBB3P26998 211 aa6.35□□□□□ -1.39
CNN3-205ENST00000474409 LEMD1Q68G75 181 aa6.35□□□□□ -1.39
CNN3-205ENST00000474409 MIR17HGQ75NE6 70 aa6.35□□□□□ -1.39
CNN3-205ENST00000474409 IQCF2Q8IXL9 164 aa6.35□□□□□ -1.39
CNN3-205ENST00000474409 OR8I2Q8N0Y5 310 aa6.35□□□□□ -1.39
CNN3-205ENST00000474409 LINC00482Q8N8I6 264 aa6.35□□□□□ -1.39
CNN3-205ENST00000474409 ZNF680Q8NEM1 530 aa6.35□□□□□ -1.39
CNN3-205ENST00000474409 MARC2Q969Z3 335 aa6.35□□□□□ -1.39
CNN3-205ENST00000474409 MAP1LC3BQ9GZQ8 125 aa6.35□□□□□ -1.39
CNN3-205ENST00000474409 SEPSECSQ9HD40 501 aaKnown RBP6.35□□□□□ -1.39
CNN3-205ENST00000474409 COL6A5A8TX70 2615 aa6.34□□□□□ -1.39
CNN3-205ENST00000474409 AGRNO00468 2067 aa6.34□□□□□ -1.39
CNN3-205ENST00000474409 A0A1B0GV50 99 aa6.34□□□□□ -1.39
CNN3-205ENST00000474409 SEC14L6B5MCN3 397 aa6.34□□□□□ -1.39
CNN3-205ENST00000474409 TEX46H3BTG2 121 aa6.34□□□□□ -1.39
CNN3-205ENST00000474409 HMGB3O15347 200 aaKnown RBP6.34□□□□□ -1.39
CNN3-205ENST00000474409 SAP30O75446 220 aa6.34□□□□□ -1.39
CNN3-205ENST00000474409 EIF3GO75821 320 aaKnown RBP eCLIP6.34□□□□□ -1.39
CNN3-205ENST00000474409 APOHP02749 345 aaPredicted RBP6.34□□□□□ -1.39
CNN3-205ENST00000474409 C8orf88P0DMB2 117 aa6.34□□□□□ -1.39
CNN3-205ENST00000474409 FOLR2P14207 255 aa6.34□□□□□ -1.39
CNN3-205ENST00000474409 RPL7P18124 248 aaKnown RBP6.34□□□□□ -1.39
CNN3-205ENST00000474409 ATF4P18848 351 aaPredicted RBP6.34□□□□□ -1.39
CNN3-205ENST00000474409 CBLN1P23435 193 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms