RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 C1orf194Q5T5A4 169 aa10.26□□□□□ -0.77
USF1-205ENST00000473969 SIGLEC15Q6ZMC9 328 aa10.26□□□□□ -0.77
USF1-205ENST00000473969 ZNF546Q86UE3 836 aa10.26□□□□□ -0.77
USF1-205ENST00000473969 OR8I2Q8N0Y5 310 aa10.26□□□□□ -0.77
USF1-205ENST00000473969 PPP1R1CQ8WVI7 109 aa10.26□□□□□ -0.77
USF1-205ENST00000473969 GLMPQ8WWB7 406 aa10.26□□□□□ -0.77
USF1-205ENST00000473969 C11orf1Q9H5F2 150 aa10.26□□□□□ -0.77
USF1-205ENST00000473969 SLC45A2Q9UMX9 530 aa10.26□□□□□ -0.77
USF1-205ENST00000473969 IGSF23A1L1A6 192 aa10.25□□□□□ -0.77
USF1-205ENST00000473969 HYPMO75409 117 aa10.25□□□□□ -0.77
USF1-205ENST00000473969 LINC00869P0C866 280 aa10.25□□□□□ -0.77
USF1-205ENST00000473969 HAGHQ16775 308 aa10.25□□□□□ -0.77
USF1-205ENST00000473969 GGTLC1Q9BX51 225 aa10.25□□□□□ -0.77
USF1-205ENST00000473969 RNF24Q9Y225 148 aa10.25□□□□□ -0.77
USF1-205ENST00000473969 U3KQK5 164 aa10.25□□□□□ -0.77
USF1-205ENST00000473969 PRKDCP78527 4128 aaKnown RBP10.24□□□□□ -0.77
USF1-205ENST00000473969 AGPAT2O15120 278 aa10.24□□□□□ -0.77
USF1-205ENST00000473969 MPC2O95563 127 aa10.24□□□□□ -0.77
USF1-205ENST00000473969 OR5G3P0C626 314 aa10.24□□□□□ -0.77
USF1-205ENST00000473969 CAMLGP49069 296 aa10.24□□□□□ -0.77
USF1-205ENST00000473969 SNRPD3P62318 126 aaKnown RBP10.24□□□□□ -0.77
USF1-205ENST00000473969 BAXQ07812 192 aa10.24□□□□□ -0.77
USF1-205ENST00000473969 ODF3L2Q3SX64 289 aa10.24□□□□□ -0.77
USF1-205ENST00000473969 PXDC1Q5TGL8 231 aa10.24□□□□□ -0.77
USF1-205ENST00000473969 SPATA25Q9BR10 227 aa10.24□□□□□ -0.77
USF1-205ENST00000473969 SLC25A22Q9H936 323 aa10.24□□□□□ -0.77
USF1-205ENST00000473969 MAP6D1Q9H9H5 199 aa10.24□□□□□ -0.77
USF1-205ENST00000473969 NRN1Q9NPD7 142 aa10.24□□□□□ -0.77
USF1-205ENST00000473969 OR5AC2Q9NZP5 309 aa10.24□□□□□ -0.77
USF1-205ENST00000473969 DOK5Q9P104 306 aa10.24□□□□□ -0.77
USF1-205ENST00000473969 HIGD1AQ9Y241 93 aa10.24□□□□□ -0.77
USF1-205ENST00000473969 UBE2L5PA0A1B0GUS4 154 aa10.23□□□□□ -0.77
USF1-205ENST00000473969 RBMY1BA6NDE4 496 aaKnown RBP10.23□□□□□ -0.77
USF1-205ENST00000473969 RBMY1EA6NEQ0 496 aaKnown RBP10.23□□□□□ -0.77
USF1-205ENST00000473969 ZNF98A6NK75 572 aa10.23□□□□□ -0.77
USF1-205ENST00000473969 K7EQG2 157 aa10.23□□□□□ -0.77
USF1-205ENST00000473969 RBMY1DP0C7P1 496 aaKnown RBP10.23□□□□□ -0.77
USF1-205ENST00000473969 GALR1P47211 349 aa10.23□□□□□ -0.77
USF1-205ENST00000473969 APOC4P55056 127 aa10.23□□□□□ -0.77
USF1-205ENST00000473969 DEFB131AP59861 70 aa10.23□□□□□ -0.77
USF1-205ENST00000473969 EWSR1Q01844 656 aaKnown RBP eCLIP10.23□□□□□ -0.77
USF1-205ENST00000473969 TMEM182Q6ZP80 229 aaPredicted RBP10.23□□□□□ -0.77
USF1-205ENST00000473969 Q6ZRG5 221 aa10.23□□□□□ -0.77
USF1-205ENST00000473969 APRG1Q8IVJ8 170 aa10.23□□□□□ -0.77
USF1-205ENST00000473969 STPG3Q8N7X2 389 aa10.23□□□□□ -0.77
USF1-205ENST00000473969 THAP6Q8TBB0 222 aa10.23□□□□□ -0.77
USF1-205ENST00000473969 GPR82Q96P67 336 aa10.23□□□□□ -0.77
USF1-205ENST00000473969 ARL6Q9H0F7 186 aa10.23□□□□□ -0.77
USF1-205ENST00000473969 H0YIZ8 118 aa10.22□□□□□ -0.77
USF1-205ENST00000473969 ZNF688P0C7X2 276 aa10.22□□□□□ -0.77
USF1-205ENST00000473969 ID1P41134 155 aa10.22□□□□□ -0.77
USF1-205ENST00000473969 PLP1P60201 277 aa10.22□□□□□ -0.77
USF1-205ENST00000473969 NHLH2Q02577 135 aa10.22□□□□□ -0.77
USF1-205ENST00000473969 FGL1Q08830 312 aa10.22□□□□□ -0.77
USF1-205ENST00000473969 FCN2Q15485 313 aa10.22□□□□□ -0.77
USF1-205ENST00000473969 SAMD13Q5VXD3 122 aa10.22□□□□□ -0.77
USF1-205ENST00000473969 LINC00322Q6ZN03 302 aaPredicted RBP10.22□□□□□ -0.77
USF1-205ENST00000473969 OR5C1Q8NGR4 320 aa10.22□□□□□ -0.77
USF1-205ENST00000473969 ELOA3CA0A087WX78 387 aaPredicted RBP10.21□□□□□ -0.77
USF1-205ENST00000473969 COX7A2P2O60397 106 aa10.21□□□□□ -0.77
USF1-205ENST00000473969 MPDU1O75352 247 aa10.21□□□□□ -0.77
USF1-205ENST00000473969 RPL35AP18077 110 aaKnown RBP10.21□□□□□ -0.77
USF1-205ENST00000473969 CXCL3P19876 107 aa10.21□□□□□ -0.77
USF1-205ENST00000473969 FGF7P21781 194 aa10.21□□□□□ -0.77
USF1-205ENST00000473969 OXA1LQ15070 435 aa10.21□□□□□ -0.77
USF1-205ENST00000473969 VWC2Q2TAL6 325 aa10.21□□□□□ -0.77
USF1-205ENST00000473969 STHQ8IWL8 128 aa10.21□□□□□ -0.77
USF1-205ENST00000473969 DCANP1Q8TF63 244 aa10.21□□□□□ -0.77
USF1-205ENST00000473969 ASB13Q8WXK3 278 aa10.21□□□□□ -0.77
USF1-205ENST00000473969 RCHY1Q96PM5 261 aa10.21□□□□□ -0.77
USF1-205ENST00000473969 CITED4Q96RK1 184 aa10.21□□□□□ -0.77
USF1-205ENST00000473969 MGST2Q99735 147 aa10.21□□□□□ -0.77
USF1-205ENST00000473969 TM2D3Q9BRN9 247 aa10.21□□□□□ -0.77
USF1-205ENST00000473969 RNF126Q9BV68 326 aa10.21□□□□□ -0.77
USF1-205ENST00000473969 SLC25A39Q9BZJ4 359 aaPredicted RBP10.21□□□□□ -0.77
USF1-205ENST00000473969 ARV1Q9H2C2 271 aa10.21□□□□□ -0.77
USF1-205ENST00000473969 SEPSECSQ9HD40 501 aaKnown RBP10.21□□□□□ -0.77
USF1-205ENST00000473969 WDR83OSQ9Y284 106 aa10.21□□□□□ -0.77
USF1-205ENST00000473969 UBE2CO00762 179 aa10.2□□□□□ -0.78
USF1-205ENST00000473969 RPL7P18124 248 aaKnown RBP10.2□□□□□ -0.78
USF1-205ENST00000473969 ATF4P18848 351 aaPredicted RBP10.2□□□□□ -0.78
USF1-205ENST00000473969 RPL12P30050 165 aaKnown RBP10.2□□□□□ -0.78
USF1-205ENST00000473969 MEOX2P50222 304 aa10.2□□□□□ -0.78
USF1-205ENST00000473969 CLINT1Q14677 625 aa10.2□□□□□ -0.78
USF1-205ENST00000473969 PSMG4Q5JS54 123 aa10.2□□□□□ -0.78
USF1-205ENST00000473969 LEMD1Q68G75 181 aa10.2□□□□□ -0.78
USF1-205ENST00000473969 FAM24BQ8N5W8 94 aa10.2□□□□□ -0.78
USF1-205ENST00000473969 ZNF709Q8N972 641 aa10.2□□□□□ -0.78
USF1-205ENST00000473969 OR1L4Q8NGR5 311 aa10.2□□□□□ -0.78
USF1-205ENST00000473969 SHANK2-AS3Q9BTD1 123 aa10.2□□□□□ -0.78
USF1-205ENST00000473969 MBD2Q9UBB5 411 aa10.2□□□□□ -0.78
USF1-205ENST00000473969 KIR2DL5BA0A0G2JN68 375 aa10.19□□□□□ -0.78
USF1-205ENST00000473969 KIR2DL5BA0A0G2JPC4 375 aa10.19□□□□□ -0.78
USF1-205ENST00000473969 H3BRN7 92 aa10.19□□□□□ -0.78
USF1-205ENST00000473969 IFNA5P01569 189 aa10.19□□□□□ -0.78
USF1-205ENST00000473969 RPL29P47914 159 aaKnown RBP10.19□□□□□ -0.78
USF1-205ENST00000473969 C10orf113Q5VZT2 155 aa10.19□□□□□ -0.78
USF1-205ENST00000473969 MIC13Q5XKP0 118 aa10.19□□□□□ -0.78
USF1-205ENST00000473969 KIR2DL5AQ8N109 375 aa10.19□□□□□ -0.78
USF1-205ENST00000473969 OR11H7Q8NGC8 314 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms