RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 PNRC1Q12796 327 aaPredicted RBP10.19□□□□□ -0.78
HMGN1-211ENST00000471260 HAGHQ16775 308 aa10.19□□□□□ -0.78
HMGN1-211ENST00000471260 ZNF585BQ52M93 769 aa10.19□□□□□ -0.78
HMGN1-211ENST00000471260 SPSB3Q6PJ21 355 aa10.19□□□□□ -0.78
HMGN1-211ENST00000471260 OR1L6Q8NGR2 347 aa10.19□□□□□ -0.78
HMGN1-211ENST00000471260 OR5B3Q8NH48 314 aa10.19□□□□□ -0.78
HMGN1-211ENST00000471260 GPR146Q96CH1 333 aa10.19□□□□□ -0.78
HMGN1-211ENST00000471260 NDUFA4L2Q9NRX3 87 aa10.19□□□□□ -0.78
HMGN1-211ENST00000471260 PRNDQ9UKY0 176 aa10.19□□□□□ -0.78
HMGN1-211ENST00000471260 M0R036 132 aa10.18□□□□□ -0.78
HMGN1-211ENST00000471260 TGOLN2O43493 480 aa10.18□□□□□ -0.78
HMGN1-211ENST00000471260 KRASP01116 189 aa10.18□□□□□ -0.78
HMGN1-211ENST00000471260 IFNA1P01562 189 aa10.18□□□□□ -0.78
HMGN1-211ENST00000471260 OR13C7P0DN81 318 aa10.18□□□□□ -0.78
HMGN1-211ENST00000471260 ELLP55199 621 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-211ENST00000471260 PAX9P55771 341 aa10.18□□□□□ -0.78
HMGN1-211ENST00000471260 CD81P60033 236 aa10.18□□□□□ -0.78
HMGN1-211ENST00000471260 CASC10Q5T4H9 136 aa10.18□□□□□ -0.78
HMGN1-211ENST00000471260 ZNF502Q8TBZ5 544 aa10.18□□□□□ -0.78
HMGN1-211ENST00000471260 SFT2D1Q8WV19 159 aa10.18□□□□□ -0.78
HMGN1-211ENST00000471260 DNAH7Q8WXX0 4024 aa10.18□□□□□ -0.78
HMGN1-211ENST00000471260 ZNF320A2RRD8 509 aa10.17□□□□□ -0.78
HMGN1-211ENST00000471260 TMEM213A2RRL7 107 aa10.17□□□□□ -0.78
HMGN1-211ENST00000471260 UBE2CO00762 179 aa10.17□□□□□ -0.78
HMGN1-211ENST00000471260 TMEM50AO95807 157 aa10.17□□□□□ -0.78
HMGN1-211ENST00000471260 WT1-ASQ06250 92 aa10.17□□□□□ -0.78
HMGN1-211ENST00000471260 ATP6V1FQ16864 119 aa10.17□□□□□ -0.78
HMGN1-211ENST00000471260 SLC25A24Q6NUK1 477 aa10.17□□□□□ -0.78
HMGN1-211ENST00000471260 LINC00322Q6ZN03 302 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-211ENST00000471260 OR10W1Q8NGF6 305 aa10.17□□□□□ -0.78
HMGN1-211ENST00000471260 SCGB1C1Q8TD33 95 aa10.17□□□□□ -0.78
HMGN1-211ENST00000471260 MBD3L1Q8WWY6 194 aa10.17□□□□□ -0.78
HMGN1-211ENST00000471260 CIB3Q96Q77 187 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-211ENST00000471260 MAGT1Q9H0U3 335 aa10.17□□□□□ -0.78
HMGN1-211ENST00000471260 MRPL27Q9P0M9 148 aaKnown RBP10.17□□□□□ -0.78
HMGN1-211ENST00000471260 CACNG5Q9UF02 275 aa10.17□□□□□ -0.78
HMGN1-211ENST00000471260 OR51B2Q9Y5P1 312 aa10.17□□□□□ -0.78
HMGN1-211ENST00000471260 F11RQ9Y624 299 aaKnown RBP10.17□□□□□ -0.78
HMGN1-211ENST00000471260 S4R3C0 116 aa10.17□□□□□ -0.78
HMGN1-211ENST00000471260 TRAV25A0A0B4J276 109 aa10.16□□□□□ -0.78
HMGN1-211ENST00000471260 LOC102723971A0A1B0GUV8 181 aa10.16□□□□□ -0.78
HMGN1-211ENST00000471260 ZNF98A6NK75 572 aa10.16□□□□□ -0.78
HMGN1-211ENST00000471260 S100A6P06703 90 aa10.16□□□□□ -0.78
HMGN1-211ENST00000471260 SRP19P09132 144 aaKnown RBP10.16□□□□□ -0.78
HMGN1-211ENST00000471260 C8orf88P0DMB2 117 aa10.16□□□□□ -0.78
HMGN1-211ENST00000471260 RAB5AP20339 215 aa10.16□□□□□ -0.78
HMGN1-211ENST00000471260 GPR183P32249 361 aa10.16□□□□□ -0.78
HMGN1-211ENST00000471260 G6PCP35575 357 aa10.16□□□□□ -0.78
HMGN1-211ENST00000471260 FHITP49789 147 aa10.16□□□□□ -0.78
HMGN1-211ENST00000471260 SLC16A13Q7RTY0 426 aa10.16□□□□□ -0.78
HMGN1-211ENST00000471260 NIPSNAP3BQ9BS92 247 aa10.16□□□□□ -0.78
HMGN1-211ENST00000471260 EDA2RQ9HAV5 297 aa10.16□□□□□ -0.78
HMGN1-211ENST00000471260 TMEM14BQ9NUH8 114 aa10.16□□□□□ -0.78
HMGN1-211ENST00000471260 UFC1Q9Y3C8 167 aa10.16□□□□□ -0.78
HMGN1-211ENST00000471260 A0A0G2JRQ6 117 aa10.15□□□□□ -0.78
HMGN1-211ENST00000471260 C15orf61A6NNL5 157 aa10.15□□□□□ -0.78
HMGN1-211ENST00000471260 OR11H12B2RN74 326 aa10.15□□□□□ -0.78
HMGN1-211ENST00000471260 CST7O76096 145 aa10.15□□□□□ -0.78
HMGN1-211ENST00000471260 IFNA17P01571 189 aa10.15□□□□□ -0.78
HMGN1-211ENST00000471260 IGKV1-39P01597 117 aa10.15□□□□□ -0.78
HMGN1-211ENST00000471260 IGKV1-5P01602 117 aa10.15□□□□□ -0.78
HMGN1-211ENST00000471260 IGKV1D-39P04432 117 aa10.15□□□□□ -0.78
HMGN1-211ENST00000471260 CD7P09564 240 aa10.15□□□□□ -0.78
HMGN1-211ENST00000471260 P0C879 139 aa10.15□□□□□ -0.78
HMGN1-211ENST00000471260 ICAM4Q14773 271 aa10.15□□□□□ -0.78
HMGN1-211ENST00000471260 TMEM14EPQ6UXP3 125 aa10.15□□□□□ -0.78
HMGN1-211ENST00000471260 YPEL4Q96NS1 127 aa10.15□□□□□ -0.78
HMGN1-211ENST00000471260 HINT2Q9BX68 163 aa10.15□□□□□ -0.78
HMGN1-211ENST00000471260 PLEKHA3Q9HB20 300 aa10.15□□□□□ -0.78
HMGN1-211ENST00000471260 GAR1Q9NY12 217 aaKnown RBP10.15□□□□□ -0.78
HMGN1-211ENST00000471260 PSENENQ9NZ42 101 aa10.15□□□□□ -0.78
HMGN1-211ENST00000471260 HSPB7Q9UBY9 170 aa10.15□□□□□ -0.78
HMGN1-211ENST00000471260 NBEAL2Q6ZNJ1 2754 aa10.14□□□□□ -0.79
HMGN1-211ENST00000471260 C5orf52A6NGY3 159 aa10.14□□□□□ -0.79
HMGN1-211ENST00000471260 MBP02144 154 aa10.14□□□□□ -0.79
HMGN1-211ENST00000471260 BCL2P10415 239 aa10.14□□□□□ -0.79
HMGN1-211ENST00000471260 EDN2P20800 178 aa10.14□□□□□ -0.79
HMGN1-211ENST00000471260 MEOX2P50222 304 aa10.14□□□□□ -0.79
HMGN1-211ENST00000471260 TMEM41BQ5BJD5 291 aa10.14□□□□□ -0.79
HMGN1-211ENST00000471260 UNQ9165/PRO28630Q6UXU0 137 aa10.14□□□□□ -0.79
HMGN1-211ENST00000471260 H2BFWTQ7Z2G1 175 aa10.14□□□□□ -0.79
HMGN1-211ENST00000471260 TMEM61Q8N0U2 210 aa10.14□□□□□ -0.79
HMGN1-211ENST00000471260 LILRB2Q8N423 598 aa10.14□□□□□ -0.79
HMGN1-211ENST00000471260 OR1P1Q8NH06 330 aa10.14□□□□□ -0.79
HMGN1-211ENST00000471260 CACNG8Q8WXS5 425 aa10.14□□□□□ -0.79
HMGN1-211ENST00000471260 TVP23CQ96ET8 276 aa10.14□□□□□ -0.79
HMGN1-211ENST00000471260 TMEM242Q9NWH2 141 aa10.14□□□□□ -0.79
HMGN1-211ENST00000471260 C21orf62Q9NYP8 219 aa10.14□□□□□ -0.79
HMGN1-211ENST00000471260 NDUFA4O00483 81 aa10.13□□□□□ -0.79
HMGN1-211ENST00000471260 AKR1D1P51857 326 aa10.13□□□□□ -0.79
HMGN1-211ENST00000471260 TNFRSF9Q07011 255 aa10.13□□□□□ -0.79
HMGN1-211ENST00000471260 TM4SF20Q53R12 229 aa10.13□□□□□ -0.79
HMGN1-211ENST00000471260 RBPMS2Q6ZRY4 209 aaKnown RBP10.13□□□□□ -0.79
HMGN1-211ENST00000471260 DEFB125Q8N687 156 aa10.13□□□□□ -0.79
HMGN1-211ENST00000471260 TMEM217Q8N7C4 229 aa10.13□□□□□ -0.79
HMGN1-211ENST00000471260 OR4A16Q8NH70 328 aa10.13□□□□□ -0.79
HMGN1-211ENST00000471260 TMEM190Q8WZ59 177 aa10.13□□□□□ -0.79
HMGN1-211ENST00000471260 TMEM147Q9BVK8 224 aa10.13□□□□□ -0.79
HMGN1-211ENST00000471260 WDR61Q9GZS3 305 aaKnown RBP10.13□□□□□ -0.79
HMGN1-211ENST00000471260 SRD5A3Q9H8P0 318 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms