RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 PPP1R14BQ96C90 147 aa12.54□□□□□ -0.4
COL7A1-208ENST00000470076 H3BMQ9 156 aa12.53□□□□□ -0.4
COL7A1-208ENST00000470076 ISLRO14498 428 aa12.53□□□□□ -0.4
COL7A1-208ENST00000470076 MED6O75586 246 aa12.53□□□□□ -0.4
COL7A1-208ENST00000470076 CFDP00746 253 aaPredicted RBP12.53□□□□□ -0.4
COL7A1-208ENST00000470076 IAPPP10997 89 aa12.53□□□□□ -0.4
COL7A1-208ENST00000470076 DEFB1P60022 68 aa12.53□□□□□ -0.4
COL7A1-208ENST00000470076 OR2F1Q13607 317 aa12.53□□□□□ -0.4
COL7A1-208ENST00000470076 LINC00336Q6ZUF6 198 aa12.53□□□□□ -0.4
COL7A1-208ENST00000470076 OR8I2Q8N0Y5 310 aa12.53□□□□□ -0.4
COL7A1-208ENST00000470076 THAP8Q8NA92 274 aa12.53□□□□□ -0.4
COL7A1-208ENST00000470076 RFNGQ9Y644 331 aa12.53□□□□□ -0.4
COL7A1-208ENST00000470076 IGKV1OR2-108A0A075B7D4 117 aa12.52□□□□□ -0.41
COL7A1-208ENST00000470076 TEX48A0A1B0GUV7 120 aa12.52□□□□□ -0.41
COL7A1-208ENST00000470076 VAMP1P23763 118 aa12.52□□□□□ -0.41
COL7A1-208ENST00000470076 MEOX2P50222 304 aa12.52□□□□□ -0.41
COL7A1-208ENST00000470076 PAX9P55771 341 aa12.52□□□□□ -0.41
COL7A1-208ENST00000470076 FXYD7P58549 80 aa12.52□□□□□ -0.41
COL7A1-208ENST00000470076 RPP30P78346 268 aaKnown RBP12.52□□□□□ -0.41
COL7A1-208ENST00000470076 ZNF79Q15937 498 aa12.52□□□□□ -0.41
COL7A1-208ENST00000470076 GGNBP1Q5YKI7 109 aa12.52□□□□□ -0.41
COL7A1-208ENST00000470076 EBLN2Q6P2I7 272 aa12.52□□□□□ -0.41
COL7A1-208ENST00000470076 TOMM5Q8N4H5 51 aa12.52□□□□□ -0.41
COL7A1-208ENST00000470076 POM121L12Q8N7R1 296 aa12.52□□□□□ -0.41
COL7A1-208ENST00000470076 ZNF709Q8N972 641 aa12.52□□□□□ -0.41
COL7A1-208ENST00000470076 OR4B1Q8NGF8 309 aa12.52□□□□□ -0.41
COL7A1-208ENST00000470076 TRIM63Q969Q1 353 aa12.52□□□□□ -0.41
COL7A1-208ENST00000470076 CIB3Q96Q77 187 aaPredicted RBP12.52□□□□□ -0.41
COL7A1-208ENST00000470076 SLC25A21Q9BQT8 299 aaPredicted RBP12.52□□□□□ -0.41
COL7A1-208ENST00000470076 PAIP2BQ9ULR5 123 aaKnown RBP12.52□□□□□ -0.41
COL7A1-208ENST00000470076 TMED3Q9Y3Q3 217 aa12.52□□□□□ -0.41
COL7A1-208ENST00000470076 IGHV3OR16-12A0A075B7B8 117 aa12.51□□□□□ -0.41
COL7A1-208ENST00000470076 EMP1P54849 157 aa12.51□□□□□ -0.41
COL7A1-208ENST00000470076 DEDD2Q8WXF8 326 aa12.51□□□□□ -0.41
COL7A1-208ENST00000470076 SCRT1Q9BWW7 348 aa12.51□□□□□ -0.41
COL7A1-208ENST00000470076 SLC45A2Q9UMX9 530 aa12.51□□□□□ -0.41
COL7A1-208ENST00000470076 GALR1P47211 349 aa12.5□□□□□ -0.41
COL7A1-208ENST00000470076 PSG9Q00887 426 aa12.5□□□□□ -0.41
COL7A1-208ENST00000470076 PYDC2Q56P42 97 aa12.5□□□□□ -0.41
COL7A1-208ENST00000470076 FAM210BQ96KR6 192 aa12.5□□□□□ -0.41
COL7A1-208ENST00000470076 KRTAP17-1Q9BYP8 105 aa12.5□□□□□ -0.41
COL7A1-208ENST00000470076 SLC35B3Q9H1N7 401 aa12.5□□□□□ -0.41
COL7A1-208ENST00000470076 RPRMQ9NS64 109 aa12.5□□□□□ -0.41
COL7A1-208ENST00000470076 GOLT1BQ9Y3E0 138 aa12.5□□□□□ -0.41
COL7A1-208ENST00000470076 A0A0J9YX75 114 aa12.49□□□□□ -0.41
COL7A1-208ENST00000470076 SYNGR2O43760 224 aa12.49□□□□□ -0.41
COL7A1-208ENST00000470076 FAM78BQ5VT40 261 aa12.49□□□□□ -0.41
COL7A1-208ENST00000470076 C16orf92Q96LL3 132 aa12.49□□□□□ -0.41
COL7A1-208ENST00000470076 DKK2Q9UBU2 259 aa12.49□□□□□ -0.41
COL7A1-208ENST00000470076 DNAH17Q9UFH2 4485 aa12.48□□□□□ -0.41
COL7A1-208ENST00000470076 DNAH2Q9P225 4427 aa12.48□□□□□ -0.41
COL7A1-208ENST00000470076 FAT2Q9NYQ8 4349 aa12.48□□□□□ -0.41
COL7A1-208ENST00000470076 PRSS46E5RG02 174 aa12.48□□□□□ -0.41
COL7A1-208ENST00000470076 F6UB75 175 aa12.48□□□□□ -0.41
COL7A1-208ENST00000470076 WRBO00258 174 aa12.48□□□□□ -0.41
COL7A1-208ENST00000470076 SFT2D2O95562 160 aa12.48□□□□□ -0.41
COL7A1-208ENST00000470076 HBE1P02100 147 aa12.48□□□□□ -0.41
COL7A1-208ENST00000470076 S100A7P31151 101 aa12.48□□□□□ -0.41
COL7A1-208ENST00000470076 PPP1R1AQ13522 171 aa12.48□□□□□ -0.41
COL7A1-208ENST00000470076 BPIFCQ8NFQ6 507 aa12.48□□□□□ -0.41
COL7A1-208ENST00000470076 OR4D5Q8NGN0 318 aa12.48□□□□□ -0.41
COL7A1-208ENST00000470076 NIPSNAP3BQ9BS92 247 aa12.48□□□□□ -0.41
COL7A1-208ENST00000470076 MAGT1Q9H0U3 335 aa12.48□□□□□ -0.41
COL7A1-208ENST00000470076 SLC25A32Q9H2D1 315 aa12.48□□□□□ -0.41
COL7A1-208ENST00000470076 V9GYH0 126 aa12.48□□□□□ -0.41
COL7A1-208ENST00000470076 ZNF98A6NK75 572 aa12.47□□□□□ -0.41
COL7A1-208ENST00000470076 OXA1LQ15070 435 aa12.47□□□□□ -0.41
COL7A1-208ENST00000470076 FAM222AQ5U5X8 452 aa12.47□□□□□ -0.41
COL7A1-208ENST00000470076 C1orf158Q8N1D5 194 aa12.47□□□□□ -0.41
COL7A1-208ENST00000470076 GPR82Q96P67 336 aa12.47□□□□□ -0.41
COL7A1-208ENST00000470076 C7orf50Q9BRJ6 194 aaKnown RBP12.47□□□□□ -0.41
COL7A1-208ENST00000470076 RSG1Q9BU20 258 aa12.47□□□□□ -0.41
COL7A1-208ENST00000470076 SLC25A22Q9H936 323 aa12.47□□□□□ -0.41
COL7A1-208ENST00000470076 DOK5Q9P104 306 aa12.47□□□□□ -0.41
COL7A1-208ENST00000470076 KIAA1109Q2LD37 5005 aa12.47□□□□□ -0.41
COL7A1-208ENST00000470076 A8MTW9 85 aa12.46□□□□□ -0.41
COL7A1-208ENST00000470076 HOXB5P09067 269 aa12.46□□□□□ -0.41
COL7A1-208ENST00000470076 S100A5P33763 92 aa12.46□□□□□ -0.41
COL7A1-208ENST00000470076 SPANXN5Q5MJ07 72 aa12.46□□□□□ -0.41
COL7A1-208ENST00000470076 GSG1LQ6UXU4 331 aa12.46□□□□□ -0.41
COL7A1-208ENST00000470076 OR1B1Q8NGR6 318 aa12.46□□□□□ -0.41
COL7A1-208ENST00000470076 C20orf173Q96LM9 149 aa12.46□□□□□ -0.41
COL7A1-208ENST00000470076 TMEM147Q9BVK8 224 aa12.46□□□□□ -0.41
COL7A1-208ENST00000470076 LOC102723971A0A1B0GUV8 181 aa12.45□□□□□ -0.42
COL7A1-208ENST00000470076 IFNA21P01568 189 aa12.45□□□□□ -0.42
COL7A1-208ENST00000470076 ORM2P19652 201 aa12.45□□□□□ -0.42
COL7A1-208ENST00000470076 UBE2MP61081 183 aaKnown RBP12.45□□□□□ -0.42
COL7A1-208ENST00000470076 AKR1C1Q04828 323 aa12.45□□□□□ -0.42
COL7A1-208ENST00000470076 RRN3P1Q2M238 152 aa12.45□□□□□ -0.42
COL7A1-208ENST00000470076 IGF2BP2-AS1Q96M15 143 aa12.45□□□□□ -0.42
COL7A1-208ENST00000470076 C17orf77Q96MU5 243 aa12.45□□□□□ -0.42
COL7A1-208ENST00000470076 STRAPQ9Y3F4 350 aaKnown RBP12.45□□□□□ -0.42
COL7A1-208ENST00000470076 YTHDF2Q9Y5A9 579 aaKnown RBP12.45□□□□□ -0.42
COL7A1-208ENST00000470076 PKHD1P08F94 4074 aa12.45□□□□□ -0.42
COL7A1-208ENST00000470076 GATA2P23769 480 aaPredicted RBP12.44□□□□□ -0.42
COL7A1-208ENST00000470076 LGALS9BQ3B8N2 356 aa12.44□□□□□ -0.42
COL7A1-208ENST00000470076 AMTNQ6UX39 209 aa12.44□□□□□ -0.42
COL7A1-208ENST00000470076 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.44□□□□□ -0.42
COL7A1-208ENST00000470076 ACOT7LQ6ZUV0 252 aa12.44□□□□□ -0.42
COL7A1-208ENST00000470076 UBE2DNLQ8IWF7 75 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms