RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 TMEM136Q6ZRR5 245 aa14.2□□□□□ -0.14
MCF2L-221ENST00000469415 OR4A5Q8NH83 315 aa14.2□□□□□ -0.14
MCF2L-221ENST00000469415 C19orf24Q9BVV8 132 aa14.2□□□□□ -0.14
MCF2L-221ENST00000469415 A8MWP6 167 aa14.2□□□□□ -0.14
MCF2L-221ENST00000469415 M0QZ24 198 aa14.2□□□□□ -0.14
MCF2L-221ENST00000469415 FOXA3P55318 350 aaPredicted RBP14.2□□□□□ -0.14
MCF2L-221ENST00000469415 SELENOTP62341 195 aa14.2□□□□□ -0.14
MCF2L-221ENST00000469415 TEX45Q8NA69 505 aa14.2□□□□□ -0.14
MCF2L-221ENST00000469415 TPPP3Q9BW30 176 aa14.2□□□□□ -0.14
MCF2L-221ENST00000469415 OSTCQ9NRP0 149 aa14.2□□□□□ -0.14
MCF2L-221ENST00000469415 CDC42EP3Q9UKI2 254 aa14.2□□□□□ -0.14
MCF2L-221ENST00000469415 EPDR1Q9UM22 224 aa14.2□□□□□ -0.14
MCF2L-221ENST00000469415 CSPG4Q6UVK1 2322 aa14.19□□□□□ -0.14
MCF2L-221ENST00000469415 HIGD1CA8MV81 97 aa14.19□□□□□ -0.14
MCF2L-221ENST00000469415 TPPP2P59282 170 aa14.19□□□□□ -0.14
MCF2L-221ENST00000469415 DMRTA1Q5VZB9 504 aa14.19□□□□□ -0.14
MCF2L-221ENST00000469415 RASL11BQ9BPW5 248 aa14.19□□□□□ -0.14
MCF2L-221ENST00000469415 TEX22C9J3V5 150 aa14.19□□□□□ -0.14
MCF2L-221ENST00000469415 PKD1L2Q7Z442 2459 aa14.19□□□□□ -0.14
MCF2L-221ENST00000469415 SIGLECL1Q8N7X8 197 aa14.19□□□□□ -0.14
MCF2L-221ENST00000469415 ITPR1Q14643 2758 aa14.18□□□□□ -0.14
MCF2L-221ENST00000469415 BMPR1BO00238 502 aa14.18□□□□□ -0.14
MCF2L-221ENST00000469415 HTR1DP28221 377 aa14.18□□□□□ -0.14
MCF2L-221ENST00000469415 ATP5IP56385 69 aaPredicted RBP14.18□□□□□ -0.14
MCF2L-221ENST00000469415 GOLT1AQ6ZVE7 132 aa14.18□□□□□ -0.14
MCF2L-221ENST00000469415 PRNTQ86SH4 94 aa14.18□□□□□ -0.14
MCF2L-221ENST00000469415 CIARTQ8N365 385 aaPredicted RBP14.18□□□□□ -0.14
MCF2L-221ENST00000469415 Q9H3A6 140 aa14.18□□□□□ -0.14
MCF2L-221ENST00000469415 ZFHX3Q15911 3703 aa14.18□□□□□ -0.14
MCF2L-221ENST00000469415 SH2D7A6NKC9 451 aaPredicted RBP14.18□□□□□ -0.14
MCF2L-221ENST00000469415 LIPFP07098 398 aa14.18□□□□□ -0.14
MCF2L-221ENST00000469415 NUP35Q8NFH5 326 aa14.18□□□□□ -0.14
MCF2L-221ENST00000469415 PGLYRP4Q96LB8 373 aa14.18□□□□□ -0.14
MCF2L-221ENST00000469415 SNHG12Q9BXW3 62 aa14.18□□□□□ -0.14
MCF2L-221ENST00000469415 TBL2Q9Y4P3 447 aaKnown RBP14.18□□□□□ -0.14
MCF2L-221ENST00000469415 F11RQ9Y624 299 aaKnown RBP14.18□□□□□ -0.14
MCF2L-221ENST00000469415 APCSP02743 223 aa14.17□□□□□ -0.14
MCF2L-221ENST00000469415 VPS13CQ709C8 3753 aa14.17□□□□□ -0.14
MCF2L-221ENST00000469415 FAM208BQ5VWN6 2430 aa14.17□□□□□ -0.14
MCF2L-221ENST00000469415 POLQO75417 2590 aa14.17□□□□□ -0.14
MCF2L-221ENST00000469415 FSTL3O95633 263 aa14.17□□□□□ -0.14
MCF2L-221ENST00000469415 GDF5OSQ5U4N7 250 aa14.17□□□□□ -0.14
MCF2L-221ENST00000469415 THAP8Q8NA92 274 aa14.17□□□□□ -0.14
MCF2L-221ENST00000469415 HIGD1AQ9Y241 93 aa14.17□□□□□ -0.14
MCF2L-221ENST00000469415 MYO18BQ8IUG5 2567 aa14.17□□□□□ -0.14
MCF2L-221ENST00000469415 ZNF596Q8TC21 504 aa14.17□□□□□ -0.14
MCF2L-221ENST00000469415 RAB1BQ9H0U4 201 aa14.17□□□□□ -0.14
MCF2L-221ENST00000469415 CRYBG3Q68DQ2 2970 aa14.17□□□□□ -0.14
MCF2L-221ENST00000469415 VWC2LB2RUY7 222 aa14.16□□□□□ -0.14
MCF2L-221ENST00000469415 PMCHL1Q16048 86 aa14.16□□□□□ -0.14
MCF2L-221ENST00000469415 RNF2Q99496 336 aa14.16□□□□□ -0.14
MCF2L-221ENST00000469415 FBXL7Q9UJT9 491 aa14.16□□□□□ -0.14
MCF2L-221ENST00000469415 A0A1W2PPR1 153 aa14.16□□□□□ -0.14
MCF2L-221ENST00000469415 M0R3E3 92 aa14.16□□□□□ -0.14
MCF2L-221ENST00000469415 IL4P05112 153 aa14.16□□□□□ -0.14
MCF2L-221ENST00000469415 RPL19P84098 196 aaKnown RBP14.16□□□□□ -0.14
MCF2L-221ENST00000469415 USP9YO00507 2555 aaPredicted RBP14.16□□□□□ -0.14
MCF2L-221ENST00000469415 MUC21A0A0G2JKD1 596 aa14.15□□□□□ -0.14
MCF2L-221ENST00000469415 MUC21A0A140T8X8 626 aa14.15□□□□□ -0.14
MCF2L-221ENST00000469415 AMY1AP04745 511 aa14.15□□□□□ -0.14
MCF2L-221ENST00000469415 FCGR2BP31994 310 aaPredicted RBP14.15□□□□□ -0.14
MCF2L-221ENST00000469415 MUC21Q5SSG8 566 aa14.15□□□□□ -0.14
MCF2L-221ENST00000469415 IGFL4Q6B9Z1 124 aa14.15□□□□□ -0.14
MCF2L-221ENST00000469415 DYNAPQ8N1N2 210 aa14.15□□□□□ -0.14
MCF2L-221ENST00000469415 TIMD4Q96H15 378 aa14.15□□□□□ -0.14
MCF2L-221ENST00000469415 C2orf88Q9BSF0 95 aa14.15□□□□□ -0.14
MCF2L-221ENST00000469415 LY96Q9Y6Y9 160 aa14.15□□□□□ -0.14
MCF2L-221ENST00000469415 LOC105371242A0A075B767 164 aa14.15□□□□□ -0.14
MCF2L-221ENST00000469415 IGLC1P0CG04 106 aa14.15□□□□□ -0.14
MCF2L-221ENST00000469415 GNB1LQ9BYB4 327 aa14.15□□□□□ -0.14
MCF2L-221ENST00000469415 DPM3Q9P2X0 92 aa14.15□□□□□ -0.14
MCF2L-221ENST00000469415 ACACBO00763 2458 aa14.15□□□□□ -0.14
MCF2L-221ENST00000469415 LCN12Q6JVE5 192 aa14.15□□□□□ -0.15
MCF2L-221ENST00000469415 SLC25A39Q9BZJ4 359 aaPredicted RBP14.15□□□□□ -0.15
MCF2L-221ENST00000469415 UBTD1Q9HAC8 227 aa14.15□□□□□ -0.15
MCF2L-221ENST00000469415 FLNCQ14315 2725 aa14.14□□□□□ -0.15
MCF2L-221ENST00000469415 IGHV3OR16-10A0A075B7F0 116 aa14.14□□□□□ -0.15
MCF2L-221ENST00000469415 CRYGBP07316 175 aa14.14□□□□□ -0.15
MCF2L-221ENST00000469415 TFPI2P48307 235 aa14.14□□□□□ -0.15
MCF2L-221ENST00000469415 TPTE2P1Q5T6R2 138 aa14.14□□□□□ -0.15
MCF2L-221ENST00000469415 FAM71F2Q6NXP2 309 aa14.14□□□□□ -0.15
MCF2L-221ENST00000469415 RNASEKQ6P5S7 137 aaKnown RBP14.14□□□□□ -0.15
MCF2L-221ENST00000469415 TMEM116Q8NCL8 245 aa14.14□□□□□ -0.15
MCF2L-221ENST00000469415 ZNF586Q9NXT0 402 aa14.14□□□□□ -0.15
MCF2L-221ENST00000469415 MSRB2Q9Y3D2 182 aa14.14□□□□□ -0.15
MCF2L-221ENST00000469415 CBY1Q9Y3M2 126 aa14.14□□□□□ -0.15
MCF2L-221ENST00000469415 TMSB15BA0A087X1C1 80 aa14.14□□□□□ -0.15
MCF2L-221ENST00000469415 IGKV1-17P01599 117 aa14.14□□□□□ -0.15
MCF2L-221ENST00000469415 DAZAP1Q96EP5 407 aaKnown RBP14.14□□□□□ -0.15
MCF2L-221ENST00000469415 IGHV3OR16-13A0A075B7E8 117 aa14.13□□□□□ -0.15
MCF2L-221ENST00000469415 IGHV3-74A0A0B4J1X5 117 aa14.13□□□□□ -0.15
MCF2L-221ENST00000469415 SMIM27A0A1W2PRY6 76 aa14.13□□□□□ -0.15
MCF2L-221ENST00000469415 BRS3P32247 399 aa14.13□□□□□ -0.15
MCF2L-221ENST00000469415 TRGV9Q99603 122 aa14.13□□□□□ -0.15
MCF2L-221ENST00000469415 NRN1Q9NPD7 142 aa14.13□□□□□ -0.15
MCF2L-221ENST00000469415 GOLT1BQ9Y3E0 138 aa14.13□□□□□ -0.15
MCF2L-221ENST00000469415 IZUMO1RA6ND01 250 aa14.13□□□□□ -0.15
MCF2L-221ENST00000469415 CRYGCP07315 174 aa14.13□□□□□ -0.15
MCF2L-221ENST00000469415 C8orf46Q8TAG6 207 aa14.13□□□□□ -0.15
MCF2L-221ENST00000469415 TMEM208Q9BTX3 173 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms