RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 USF2Q15853 346 aaPredicted RBP6.25□□□□□ -1.41
NPHP3-204ENST00000469232 AWAT1Q58HT5 328 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 GCSAMLQ5JQS6 135 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 FAM74A1Q5RGS3 127 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 Q6ZRG5 221 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 OR1L4Q8NGR5 311 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 SUN5Q8TC36 379 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 TMEM190Q8WZ59 177 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 RNF125Q96EQ8 232 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 FAM167A-AS1Q96KT0 104 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 PFDN5Q99471 154 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 CITED1Q99966 193 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 MRPL32Q9BYC8 188 aaKnown RBP6.25□□□□□ -1.41
NPHP3-204ENST00000469232 MED9Q9NWA0 146 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 CTXND1A0A1B0GTU2 59 aa6.24□□□□□ -1.41
NPHP3-204ENST00000469232 PPP5D1E7EU14 171 aa6.24□□□□□ -1.41
NPHP3-204ENST00000469232 HYPMO75409 117 aa6.24□□□□□ -1.41
NPHP3-204ENST00000469232 IGHV3-11P01762 117 aa6.24□□□□□ -1.41
NPHP3-204ENST00000469232 C8orf88P0DMB2 117 aa6.24□□□□□ -1.41
NPHP3-204ENST00000469232 CRYBB3P26998 211 aa6.24□□□□□ -1.41
NPHP3-204ENST00000469232 BLOC1S1P78537 153 aa6.24□□□□□ -1.41
NPHP3-204ENST00000469232 KLF5Q13887 457 aaPredicted RBP6.24□□□□□ -1.41
NPHP3-204ENST00000469232 AKR1C8PQ5T2L2 129 aa6.24□□□□□ -1.41
NPHP3-204ENST00000469232 C18orf65Q6ZTR6 163 aa6.24□□□□□ -1.41
NPHP3-204ENST00000469232 NDUFA11Q86Y39 141 aa6.24□□□□□ -1.41
NPHP3-204ENST00000469232 OR10G4Q8NGN3 311 aa6.24□□□□□ -1.41
NPHP3-204ENST00000469232 OR10G9Q8NGN4 311 aa6.24□□□□□ -1.41
NPHP3-204ENST00000469232 OR10G7Q8NGN6 311 aa6.24□□□□□ -1.41
NPHP3-204ENST00000469232 CITED2Q99967 270 aaPredicted RBP6.24□□□□□ -1.41
NPHP3-204ENST00000469232 SHANK2-AS3Q9BTD1 123 aa6.24□□□□□ -1.41
NPHP3-204ENST00000469232 FUT9Q9Y231 359 aa6.24□□□□□ -1.41
NPHP3-204ENST00000469232 PUS1Q9Y606 427 aaKnown RBP eCLIP6.24□□□□□ -1.41
NPHP3-204ENST00000469232 IGHV4OR15-8A0A075B7B6 117 aa6.23□□□□□ -1.41
NPHP3-204ENST00000469232 A0A087WW49 117 aa6.23□□□□□ -1.41
NPHP3-204ENST00000469232 H3BRN7 92 aa6.23□□□□□ -1.41
NPHP3-204ENST00000469232 MRPS12O15235 138 aaKnown RBP6.23□□□□□ -1.41
NPHP3-204ENST00000469232 STAG3L2P0CL84 134 aa6.23□□□□□ -1.41
NPHP3-204ENST00000469232 STAG3L3P0CL85 134 aa6.23□□□□□ -1.41
NPHP3-204ENST00000469232 ZP3P21754 424 aa6.23□□□□□ -1.41
NPHP3-204ENST00000469232 FHITP49789 147 aa6.23□□□□□ -1.41
NPHP3-204ENST00000469232 RHOBP62745 196 aa6.23□□□□□ -1.41
NPHP3-204ENST00000469232 SSX7Q7RTT5 188 aa6.23□□□□□ -1.41
NPHP3-204ENST00000469232 RAB24Q969Q5 203 aa6.23□□□□□ -1.41
NPHP3-204ENST00000469232 ACTR3CQ9C0K3 210 aaPredicted RBP6.23□□□□□ -1.41
NPHP3-204ENST00000469232 SEPSECSQ9HD40 501 aaKnown RBP6.23□□□□□ -1.41
NPHP3-204ENST00000469232 COX7A2P2O60397 106 aa6.22□□□□□ -1.41
NPHP3-204ENST00000469232 NDUFS6O75380 124 aaKnown RBP6.22□□□□□ -1.41
NPHP3-204ENST00000469232 IL4P05112 153 aa6.22□□□□□ -1.41
NPHP3-204ENST00000469232 C1orf194Q5T5A4 169 aa6.22□□□□□ -1.41
NPHP3-204ENST00000469232 MORN5Q5VZ52 161 aa6.22□□□□□ -1.41
NPHP3-204ENST00000469232 C10orf113Q5VZT2 155 aa6.22□□□□□ -1.41
NPHP3-204ENST00000469232 UNQ9165/PRO28630Q6UXU0 137 aa6.22□□□□□ -1.41
NPHP3-204ENST00000469232 ZNF503Q96F45 646 aa6.22□□□□□ -1.41
NPHP3-204ENST00000469232 RAX2Q96IS3 184 aa6.22□□□□□ -1.41
NPHP3-204ENST00000469232 SCRT1Q9BWW7 348 aa6.22□□□□□ -1.41
NPHP3-204ENST00000469232 SLC25A39Q9BZJ4 359 aaPredicted RBP6.22□□□□□ -1.41
NPHP3-204ENST00000469232 TMEM14CQ9P0S9 112 aa6.22□□□□□ -1.41
NPHP3-204ENST00000469232 RNF24Q9Y225 148 aa6.22□□□□□ -1.41
NPHP3-204ENST00000469232 HIGD1AQ9Y241 93 aa6.22□□□□□ -1.41
NPHP3-204ENST00000469232 TMEM213A2RRL7 107 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 ANKRD34BA5PLL1 514 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 LINC00862A6NCI5 91 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 ZNF98A6NK75 572 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 LINC01619G3V211 115 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 BUB3O43684 328 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 HOXD3P31249 432 aaPredicted RBP6.21□□□□□ -1.41
NPHP3-204ENST00000469232 CDC34P49427 236 aaPredicted RBP6.21□□□□□ -1.41
NPHP3-204ENST00000469232 FAM106AQ4KMX7 169 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 FAM78BQ5VT40 261 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 SPATA31B1PQ5VZV4 182 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 S100A7AQ86SG5 101 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 C1QL4Q86Z23 238 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 KLHL30-AS1Q8NEE0 82 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 STXBP6Q8NFX7 210 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 OR1N2Q8NGR9 330 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 FAM213BQ8TBF2 198 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 ZNF747Q9BV97 191 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 SIGLEC8Q9NYZ4 499 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 ARL2-SNX15V9GYD0 113 aa6.21□□□□□ -1.41
NPHP3-204ENST00000469232 MAP1LC3B2A6NCE7 125 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 ZNF705EA8MWA4 302 aaPredicted RBP6.21□□□□□ -1.42
NPHP3-204ENST00000469232 NUDT19A8MXV4 375 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 CCL24O00175 119 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 HBE1P02100 147 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 GP9P14770 177 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 ORM2P19652 201 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 S100A7P31151 101 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 MYCNOSP40205 109 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 LYZP61626 148 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 FAM122CQ6P4D5 195 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 IL34Q6ZMJ4 242 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 PQLC2Q6ZP29 291 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 MIR17HGQ75NE6 70 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 LINC00305Q7Z4B0 112 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 OR11H1Q8NG94 326 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 OR1B1Q8NGR6 318 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 GLMPQ8WWB7 406 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 MARC2Q969Z3 335 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 C17orf77Q96MU5 243 aa6.21□□□□□ -1.42
NPHP3-204ENST00000469232 OR5B12Q96R08 314 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms