RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 OR51S1Q8NGJ8 323 aa8.71□□□□□ -1.02
COL5A1-207ENST00000469093 RNF125Q96EQ8 232 aa8.71□□□□□ -1.02
COL5A1-207ENST00000469093 LINC00052Q96N35 136 aa8.71□□□□□ -1.02
COL5A1-207ENST00000469093 CLUHP3Q96NS8 147 aa8.71□□□□□ -1.02
COL5A1-207ENST00000469093 SDHCQ99643 169 aaPredicted RBP8.71□□□□□ -1.02
COL5A1-207ENST00000469093 NIPSNAP3BQ9BS92 247 aa8.71□□□□□ -1.02
COL5A1-207ENST00000469093 GPR132Q9UNW8 380 aa8.71□□□□□ -1.02
COL5A1-207ENST00000469093 C14orf166Q9Y224 244 aaKnown RBP8.71□□□□□ -1.02
COL5A1-207ENST00000469093 RFNGQ9Y644 331 aa8.71□□□□□ -1.02
COL5A1-207ENST00000469093 TMEM56-RWDD3S4R434 201 aa8.71□□□□□ -1.02
COL5A1-207ENST00000469093 RYR1P21817 5038 aa8.71□□□□□ -1.02
COL5A1-207ENST00000469093 SURF2Q15527 256 aaPredicted RBP8.7□□□□□ -1.02
COL5A1-207ENST00000469093 FAM222AQ5U5X8 452 aa8.7□□□□□ -1.02
COL5A1-207ENST00000469093 GSG1LQ6UXU4 331 aa8.7□□□□□ -1.02
COL5A1-207ENST00000469093 FOXI2Q6ZQN5 318 aa8.7□□□□□ -1.02
COL5A1-207ENST00000469093 UBE2DNLQ8IWF7 75 aa8.7□□□□□ -1.02
COL5A1-207ENST00000469093 OR4B1Q8NGF8 309 aa8.7□□□□□ -1.02
COL5A1-207ENST00000469093 PBDC1Q9BVG4 233 aa8.7□□□□□ -1.02
COL5A1-207ENST00000469093 KRTAP4-5Q9BYR2 181 aa8.7□□□□□ -1.02
COL5A1-207ENST00000469093 SLC35B3Q9H1N7 401 aa8.7□□□□□ -1.02
COL5A1-207ENST00000469093 U3KQ87 197 aa8.7□□□□□ -1.02
COL5A1-207ENST00000469093 PKHD1P08F94 4074 aa8.69□□□□□ -1.02
COL5A1-207ENST00000469093 CRYM-AS1A6NIL9 109 aa8.69□□□□□ -1.02
COL5A1-207ENST00000469093 SOCS3O14543 225 aa8.69□□□□□ -1.02
COL5A1-207ENST00000469093 LYRM1O43325 122 aa8.69□□□□□ -1.02
COL5A1-207ENST00000469093 SULT1A3P0DMM9 295 aa8.69□□□□□ -1.02
COL5A1-207ENST00000469093 SULT1A4P0DMN0 295 aa8.69□□□□□ -1.02
COL5A1-207ENST00000469093 ID1P41134 155 aa8.69□□□□□ -1.02
COL5A1-207ENST00000469093 ZNF90Q03938 601 aa8.69□□□□□ -1.02
COL5A1-207ENST00000469093 OXA1LQ15070 435 aa8.69□□□□□ -1.02
COL5A1-207ENST00000469093 RNF212Q495C1 297 aa8.69□□□□□ -1.02
COL5A1-207ENST00000469093 OR8G2PQ6IF36 304 aa8.69□□□□□ -1.02
COL5A1-207ENST00000469093 C1orf158Q8N1D5 194 aa8.69□□□□□ -1.02
COL5A1-207ENST00000469093 ENKURQ8TC29 256 aa8.69□□□□□ -1.02
COL5A1-207ENST00000469093 SLC25A21Q9BQT8 299 aaPredicted RBP8.69□□□□□ -1.02
COL5A1-207ENST00000469093 CACFD1Q9UGQ2 172 aa8.69□□□□□ -1.02
COL5A1-207ENST00000469093 PFDN2Q9UHV9 154 aa8.69□□□□□ -1.02
COL5A1-207ENST00000469093 DNAH17Q9UFH2 4485 aa8.68□□□□□ -1.02
COL5A1-207ENST00000469093 IGKV1D-37A0A075B6S9 117 aa8.68□□□□□ -1.02
COL5A1-207ENST00000469093 TEX48A0A1B0GUV7 120 aa8.68□□□□□ -1.02
COL5A1-207ENST00000469093 ZFP92A6NM28 416 aa8.68□□□□□ -1.02
COL5A1-207ENST00000469093 F6UB75 175 aa8.68□□□□□ -1.02
COL5A1-207ENST00000469093 NUP62P37198 522 aaPredicted RBP8.68□□□□□ -1.02
COL5A1-207ENST00000469093 PSMB3P49720 205 aa8.68□□□□□ -1.02
COL5A1-207ENST00000469093 PSG9Q00887 426 aa8.68□□□□□ -1.02
COL5A1-207ENST00000469093 ASAH1Q13510 395 aa8.68□□□□□ -1.02
COL5A1-207ENST00000469093 GAMTQ14353 236 aa8.68□□□□□ -1.02
COL5A1-207ENST00000469093 C1orf194Q5T5A4 169 aa8.68□□□□□ -1.02
COL5A1-207ENST00000469093 FAM78BQ5VT40 261 aa8.68□□□□□ -1.02
COL5A1-207ENST00000469093 ZNF575Q86XF7 245 aa8.68□□□□□ -1.02
COL5A1-207ENST00000469093 LGI3Q8N145 548 aa8.68□□□□□ -1.02
COL5A1-207ENST00000469093 IL22RA2Q969J5 263 aa8.68□□□□□ -1.02
COL5A1-207ENST00000469093 PRR13Q9NZ81 148 aa8.68□□□□□ -1.02
COL5A1-207ENST00000469093 HSPB7Q9UBY9 170 aa8.68□□□□□ -1.02
COL5A1-207ENST00000469093 YTHDF2Q9Y5A9 579 aaKnown RBP8.68□□□□□ -1.02
COL5A1-207ENST00000469093 FAM240BA0A1B0GVZ2 78 aa8.67□□□□□ -1.02
COL5A1-207ENST00000469093 SNRPGP15A8MWD9 76 aa8.67□□□□□ -1.02
COL5A1-207ENST00000469093 HBE1P02100 147 aa8.67□□□□□ -1.02
COL5A1-207ENST00000469093 HTN3P15516 51 aa8.67□□□□□ -1.02
COL5A1-207ENST00000469093 GPX4P36969 197 aaPredicted RBP8.67□□□□□ -1.02
COL5A1-207ENST00000469093 PAX9P55771 341 aa8.67□□□□□ -1.02
COL5A1-207ENST00000469093 SUPT4H1P63272 117 aaKnown RBP8.67□□□□□ -1.02
COL5A1-207ENST00000469093 SOHLH1Q5JUK2 328 aa8.67□□□□□ -1.02
COL5A1-207ENST00000469093 C1orf134Q5TEV5 83 aa8.67□□□□□ -1.02
COL5A1-207ENST00000469093 SPATA31B1PQ5VZV4 182 aa8.67□□□□□ -1.02
COL5A1-207ENST00000469093 COQ8AQ8NI60 647 aa8.67□□□□□ -1.02
COL5A1-207ENST00000469093 DTD1Q8TEA8 209 aa8.67□□□□□ -1.02
COL5A1-207ENST00000469093 RBKSQ9H477 322 aa8.67□□□□□ -1.02
COL5A1-207ENST00000469093 KCNIP3Q9Y2W7 256 aa8.67□□□□□ -1.02
COL5A1-207ENST00000469093 GOLT1BQ9Y3E0 138 aa8.67□□□□□ -1.02
COL5A1-207ENST00000469093 DNAH11Q96DT5 4516 aa8.67□□□□□ -1.02
COL5A1-207ENST00000469093 A0A0J9YX75 114 aa8.66□□□□□ -1.02
COL5A1-207ENST00000469093 LOC102723971A0A1B0GUV8 181 aa8.66□□□□□ -1.02
COL5A1-207ENST00000469093 ISLRO14498 428 aa8.66□□□□□ -1.02
COL5A1-207ENST00000469093 CCR6P51684 374 aa8.66□□□□□ -1.02
COL5A1-207ENST00000469093 ATP5IP56385 69 aaPredicted RBP8.66□□□□□ -1.02
COL5A1-207ENST00000469093 EBLN2Q6P2I7 272 aa8.66□□□□□ -1.02
COL5A1-207ENST00000469093 TMEM88Q6PEY1 159 aa8.66□□□□□ -1.02
COL5A1-207ENST00000469093 LYZL2Q7Z4W2 148 aa8.66□□□□□ -1.02
COL5A1-207ENST00000469093 TMED4Q7Z7H5 227 aa8.66□□□□□ -1.02
COL5A1-207ENST00000469093 OR8I2Q8N0Y5 310 aa8.66□□□□□ -1.02
COL5A1-207ENST00000469093 NACAE9PAV3 2078 aa8.65□□□□□ -1.02
COL5A1-207ENST00000469093 DYNC1H1Q14204 4646 aaKnown RBP8.65□□□□□ -1.02
COL5A1-207ENST00000469093 A0A0B4J2A0 478 aa8.65□□□□□ -1.02
COL5A1-207ENST00000469093 PLA2G10O15496 165 aa8.65□□□□□ -1.02
COL5A1-207ENST00000469093 NDUFB6O95139 128 aa8.65□□□□□ -1.02
COL5A1-207ENST00000469093 ANXA3P12429 323 aa8.65□□□□□ -1.02
COL5A1-207ENST00000469093 LYZP61626 148 aa8.65□□□□□ -1.02
COL5A1-207ENST00000469093 OR2F1Q13607 317 aa8.65□□□□□ -1.02
COL5A1-207ENST00000469093 SMCO1Q147U7 214 aa8.65□□□□□ -1.02
COL5A1-207ENST00000469093 RRN3P1Q2M238 152 aa8.65□□□□□ -1.02
COL5A1-207ENST00000469093 C20orf173Q96LM9 149 aa8.65□□□□□ -1.02
COL5A1-207ENST00000469093 C17orf77Q96MU5 243 aa8.65□□□□□ -1.02
COL5A1-207ENST00000469093 SHPKQ9UHJ6 478 aa8.65□□□□□ -1.02
COL5A1-207ENST00000469093 IGKV1OR2-108A0A075B7D4 117 aa8.64□□□□□ -1.03
COL5A1-207ENST00000469093 PIGBOS1A0A0B4J2F0 54 aa8.64□□□□□ -1.03
COL5A1-207ENST00000469093 A8MTW9 85 aa8.64□□□□□ -1.03
COL5A1-207ENST00000469093 PRM2P04554 102 aa8.64□□□□□ -1.03
COL5A1-207ENST00000469093 FABP1P07148 127 aa8.64□□□□□ -1.03
COL5A1-207ENST00000469093 AKR1C4P17516 323 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms