RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 MCRIP2Q9BUT9 160 aaKnown RBP14.61□□□□□ -0.07
SNAPC3-205ENST00000467062 POLEQ07864 2286 aa14.6□□□□□ -0.07
SNAPC3-205ENST00000467062 ACTL6BO94805 426 aa14.6□□□□□ -0.07
SNAPC3-205ENST00000467062 FOXA3P55318 350 aaPredicted RBP14.6□□□□□ -0.07
SNAPC3-205ENST00000467062 HBBP68871 147 aa14.6□□□□□ -0.07
SNAPC3-205ENST00000467062 FGF6P10767 208 aa14.6□□□□□ -0.07
SNAPC3-205ENST00000467062 SAMD5Q5TGI4 173 aa14.6□□□□□ -0.07
SNAPC3-205ENST00000467062 TRAT1Q6PIZ9 186 aa14.6□□□□□ -0.07
SNAPC3-205ENST00000467062 OR4X2Q8NGF9 303 aa14.6□□□□□ -0.07
SNAPC3-205ENST00000467062 C1orf159Q96HA4 380 aa14.6□□□□□ -0.07
SNAPC3-205ENST00000467062 GEMIN7Q9H840 131 aaKnown RBP14.6□□□□□ -0.07
SNAPC3-205ENST00000467062 DSCAMO60469 2012 aa14.6□□□□□ -0.07
SNAPC3-205ENST00000467062 A1L4Q6 167 aa14.59□□□□□ -0.07
SNAPC3-205ENST00000467062 MGST3O14880 152 aa14.59□□□□□ -0.07
SNAPC3-205ENST00000467062 SIVA1O15304 175 aa14.59□□□□□ -0.07
SNAPC3-205ENST00000467062 FAM90A1Q86YD7 464 aa14.59□□□□□ -0.07
SNAPC3-205ENST00000467062 ADTRPQ96IZ2 230 aa14.59□□□□□ -0.07
SNAPC3-205ENST00000467062 IFI27L2Q9H2X8 130 aa14.59□□□□□ -0.07
SNAPC3-205ENST00000467062 ARFGEF3Q5TH69 2177 aa14.59□□□□□ -0.07
SNAPC3-205ENST00000467062 KLK10O43240 276 aa14.59□□□□□ -0.07
SNAPC3-205ENST00000467062 TEX45Q8NA69 505 aa14.59□□□□□ -0.07
SNAPC3-205ENST00000467062 COL25A1Q9BXS0 654 aaPredicted RBP14.59□□□□□ -0.07
SNAPC3-205ENST00000467062 SVEP1Q4LDE5 3571 aa14.58□□□□□ -0.07
SNAPC3-205ENST00000467062 FAM90A9PA6NNJ1 464 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 FAM87AP0C7U9 286 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 VDAC2P45880 294 aaPredicted RBP14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 TAS2R45P59539 299 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 PRR20EP86478 221 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 PRR20CP86479 221 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 PRR20DP86480 221 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 PRR20BP86481 221 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 PRR20AP86496 221 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 C5orf64Q2M2E5 130 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 ADAMTSL5Q6ZMM2 481 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 CCL13Q99616 98 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 CALYQ9NYX4 217 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 HCFC1P51610 2035 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 CSMD1Q96PZ7 3565 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 CEACAM4O75871 244 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 CT45A1Q5HYN5 189 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 CT45A3Q8NHU0 189 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 BLNKQ8WV28 456 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 TNCP24821 2201 aa14.58□□□□□ -0.08
SNAPC3-205ENST00000467062 GFRA3O60609 400 aa14.57□□□□□ -0.08
SNAPC3-205ENST00000467062 IGFBP2P18065 325 aa14.57□□□□□ -0.08
SNAPC3-205ENST00000467062 CCL8P80075 99 aa14.57□□□□□ -0.08
SNAPC3-205ENST00000467062 BOD1L2Q8IYS8 172 aa14.57□□□□□ -0.08
SNAPC3-205ENST00000467062 FAM216BQ8N7L0 139 aa14.57□□□□□ -0.08
SNAPC3-205ENST00000467062 S1PR3Q99500 378 aa14.57□□□□□ -0.08
SNAPC3-205ENST00000467062 HINT2Q9BX68 163 aa14.57□□□□□ -0.08
SNAPC3-205ENST00000467062 ZGRF1Q86YA3 2104 aa14.57□□□□□ -0.08
SNAPC3-205ENST00000467062 LRBAP50851 2863 aa14.57□□□□□ -0.08
SNAPC3-205ENST00000467062 RBMXL3Q8N7X1 1067 aaKnown RBP14.57□□□□□ -0.08
SNAPC3-205ENST00000467062 TMEM140Q9NV12 185 aa14.57□□□□□ -0.08
SNAPC3-205ENST00000467062 SOX21Q9Y651 276 aaPredicted RBP14.57□□□□□ -0.08
SNAPC3-205ENST00000467062 SMIM13P0DJ93 91 aa14.56□□□□□ -0.08
SNAPC3-205ENST00000467062 GLRXP35754 106 aa14.56□□□□□ -0.08
SNAPC3-205ENST00000467062 C17orf58Q2M2W7 97 aa14.56□□□□□ -0.08
SNAPC3-205ENST00000467062 LHBP01229 141 aa14.56□□□□□ -0.08
SNAPC3-205ENST00000467062 NABP2Q9BQ15 211 aa14.56□□□□□ -0.08
SNAPC3-205ENST00000467062 NDFIP1Q9BT67 221 aa14.56□□□□□ -0.08
SNAPC3-205ENST00000467062 JPT1Q9UK76 154 aa14.56□□□□□ -0.08
SNAPC3-205ENST00000467062 SMAD7O15105 426 aaKnown RBP14.55□□□□□ -0.08
SNAPC3-205ENST00000467062 SAA2P0DJI9 122 aaPredicted RBP14.55□□□□□ -0.08
SNAPC3-205ENST00000467062 ZNF503Q96F45 646 aa14.55□□□□□ -0.08
SNAPC3-205ENST00000467062 VGLL1Q99990 258 aa14.55□□□□□ -0.08
SNAPC3-205ENST00000467062 TPRP12270 2363 aaKnown RBP14.55□□□□□ -0.08
SNAPC3-205ENST00000467062 PTPRBP23467 1997 aa14.55□□□□□ -0.08
SNAPC3-205ENST00000467062 NBASA2RRP1 2371 aa14.55□□□□□ -0.08
SNAPC3-205ENST00000467062 TEX50A0A1B0GTY4 177 aa14.54□□□□□ -0.08
SNAPC3-205ENST00000467062 F8W1H4 67 aa14.54□□□□□ -0.08
SNAPC3-205ENST00000467062 IGHV1-46P01743 117 aa14.54□□□□□ -0.08
SNAPC3-205ENST00000467062 TNFAIP6P98066 277 aaPredicted RBP14.54□□□□□ -0.08
SNAPC3-205ENST00000467062 MZT1Q08AG7 82 aa14.54□□□□□ -0.08
SNAPC3-205ENST00000467062 Q6ZS92 163 aa14.54□□□□□ -0.08
SNAPC3-205ENST00000467062 PPP1R35Q8TAP8 253 aa14.54□□□□□ -0.08
SNAPC3-205ENST00000467062 C19orf24Q9BVV8 132 aa14.54□□□□□ -0.08
SNAPC3-205ENST00000467062 SPANXB1Q9NS25 103 aaPredicted RBP14.54□□□□□ -0.08
SNAPC3-205ENST00000467062 SPTA1P02549 2419 aa14.54□□□□□ -0.08
SNAPC3-205ENST00000467062 ASPHD1Q5U4P2 390 aa14.54□□□□□ -0.08
SNAPC3-205ENST00000467062 MRPL16Q9NX20 251 aaKnown RBP14.54□□□□□ -0.08
SNAPC3-205ENST00000467062 ZZEF1O43149 2961 aa14.53□□□□□ -0.08
SNAPC3-205ENST00000467062 ERVK-16P61578 105 aa14.53□□□□□ -0.08
SNAPC3-205ENST00000467062 TLN1Q9Y490 2541 aaKnown RBP14.53□□□□□ -0.08
SNAPC3-205ENST00000467062 TET2Q6N021 2002 aaPredicted RBP14.53□□□□□ -0.08
SNAPC3-205ENST00000467062 VWC2LB2RUY7 222 aa14.53□□□□□ -0.08
SNAPC3-205ENST00000467062 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.52□□□□□ -0.08
SNAPC3-205ENST00000467062 RND1Q92730 232 aa14.52□□□□□ -0.08
SNAPC3-205ENST00000467062 ZNF747Q9BV97 191 aa14.52□□□□□ -0.08
SNAPC3-205ENST00000467062 TMUB1Q9BVT8 246 aa14.52□□□□□ -0.08
SNAPC3-205ENST00000467062 RNF7Q9UBF6 113 aa14.52□□□□□ -0.08
SNAPC3-205ENST00000467062 TCF19Q9Y242 345 aa14.52□□□□□ -0.08
SNAPC3-205ENST00000467062 AMMECR1Q9Y4X0 333 aaPredicted RBP14.52□□□□□ -0.08
SNAPC3-205ENST00000467062 TIMM8BQ9Y5J9 83 aaPredicted RBP14.52□□□□□ -0.08
SNAPC3-205ENST00000467062 CGB3P0DN86 165 aa14.52□□□□□ -0.09
SNAPC3-205ENST00000467062 CGB7P0DN87 165 aa14.52□□□□□ -0.09
SNAPC3-205ENST00000467062 CFHR2P36980 270 aa14.52□□□□□ -0.09
SNAPC3-205ENST00000467062 LINC00479Q96M42 142 aa14.52□□□□□ -0.09
SNAPC3-205ENST00000467062 SIGLEC8Q9NYZ4 499 aa14.52□□□□□ -0.09
SNAPC3-205ENST00000467062 IGLV3-9A0A075B6K5 115 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms