RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 UQCC1Q9NVA1 299 aa17.36■□□□□ 0.37
SUMO3-205ENST00000466861 H0YIZ8 118 aa17.35■□□□□ 0.37
SUMO3-205ENST00000466861 LRRC37A5PQ49AS3 106 aa17.35■□□□□ 0.37
SUMO3-205ENST00000466861 TMEM217Q8N7C4 229 aa17.35■□□□□ 0.37
SUMO3-205ENST00000466861 OR5AC2Q9NZP5 309 aa17.35■□□□□ 0.37
SUMO3-205ENST00000466861 RNF24Q9Y225 148 aa17.35■□□□□ 0.37
SUMO3-205ENST00000466861 IGKV3-7A0A075B6H7 116 aa17.34■□□□□ 0.37
SUMO3-205ENST00000466861 K7EQG2 157 aa17.34■□□□□ 0.37
SUMO3-205ENST00000466861 SIGLEC15Q6ZMC9 328 aa17.34■□□□□ 0.37
SUMO3-205ENST00000466861 GBGT1Q8N5D6 347 aa17.34■□□□□ 0.37
SUMO3-205ENST00000466861 CHAC2Q8WUX2 184 aa17.34■□□□□ 0.37
SUMO3-205ENST00000466861 RNF126Q9BV68 326 aa17.34■□□□□ 0.37
SUMO3-205ENST00000466861 WFDC10AQ9H1F0 79 aa17.34■□□□□ 0.37
SUMO3-205ENST00000466861 WDR83OSQ9Y284 106 aa17.34■□□□□ 0.37
SUMO3-205ENST00000466861 DNAH9Q9NYC9 4486 aa17.33■□□□□ 0.37
SUMO3-205ENST00000466861 AGPAT2O15120 278 aa17.33■□□□□ 0.36
SUMO3-205ENST00000466861 TFPI2P48307 235 aa17.33■□□□□ 0.36
SUMO3-205ENST00000466861 TMEM182Q6ZP80 229 aaPredicted RBP17.33■□□□□ 0.36
SUMO3-205ENST00000466861 STXBP6Q8NFX7 210 aa17.33■□□□□ 0.36
SUMO3-205ENST00000466861 DCANP1Q8TF63 244 aa17.33■□□□□ 0.36
SUMO3-205ENST00000466861 PPP1R14BQ96C90 147 aa17.33■□□□□ 0.36
SUMO3-205ENST00000466861 ASCL2Q99929 193 aa17.33■□□□□ 0.36
SUMO3-205ENST00000466861 TM2D3Q9BRN9 247 aa17.33■□□□□ 0.36
SUMO3-205ENST00000466861 RBMY1BA6NDE4 496 aaKnown RBP17.32■□□□□ 0.36
SUMO3-205ENST00000466861 RBMY1EA6NEQ0 496 aaKnown RBP17.32■□□□□ 0.36
SUMO3-205ENST00000466861 MPDU1O75352 247 aa17.32■□□□□ 0.36
SUMO3-205ENST00000466861 RBMY1DP0C7P1 496 aaKnown RBP17.32■□□□□ 0.36
SUMO3-205ENST00000466861 LINC00869P0C866 280 aa17.32■□□□□ 0.36
SUMO3-205ENST00000466861 GATA2P23769 480 aaPredicted RBP17.32■□□□□ 0.36
SUMO3-205ENST00000466861 RAP2BP61225 183 aa17.32■□□□□ 0.36
SUMO3-205ENST00000466861 EWSR1Q01844 656 aaKnown RBP eCLIP17.32■□□□□ 0.365e-9■■□□□ 13.5
SUMO3-205ENST00000466861 HAGHQ16775 308 aa17.32■□□□□ 0.36
SUMO3-205ENST00000466861 STPG3Q8N7X2 389 aa17.32■□□□□ 0.36
SUMO3-205ENST00000466861 GPR82Q96P67 336 aa17.32■□□□□ 0.36
SUMO3-205ENST00000466861 ZMAT4Q9H898 229 aa17.32■□□□□ 0.36
SUMO3-205ENST00000466861 MAP6D1Q9H9H5 199 aa17.32■□□□□ 0.36
SUMO3-205ENST00000466861 NRN1Q9NPD7 142 aa17.32■□□□□ 0.36
SUMO3-205ENST00000466861 LOC102724200A0A096LPH7 203 aaPredicted RBP17.31■□□□□ 0.36
SUMO3-205ENST00000466861 HYPMO75409 117 aa17.31■□□□□ 0.36
SUMO3-205ENST00000466861 LYL1P12980 280 aa17.31■□□□□ 0.36
SUMO3-205ENST00000466861 ORM2P19652 201 aa17.31■□□□□ 0.36
SUMO3-205ENST00000466861 CXCL3P19876 107 aa17.31■□□□□ 0.36
SUMO3-205ENST00000466861 SAMD13Q5VXD3 122 aa17.31■□□□□ 0.36
SUMO3-205ENST00000466861 OR1B1Q8NGR6 318 aa17.31■□□□□ 0.36
SUMO3-205ENST00000466861 MGST2Q99735 147 aa17.31■□□□□ 0.36
SUMO3-205ENST00000466861 GGTLC1Q9BX51 225 aa17.31■□□□□ 0.36
SUMO3-205ENST00000466861 UBQLN2Q9UHD9 624 aa17.31■□□□□ 0.36
SUMO3-205ENST00000466861 FCN2Q15485 313 aa17.3■□□□□ 0.36
SUMO3-205ENST00000466861 WFDC3Q8IUB2 231 aa17.3■□□□□ 0.36
SUMO3-205ENST00000466861 OR8I2Q8N0Y5 310 aa17.3■□□□□ 0.36
SUMO3-205ENST00000466861 OR11H7Q8NGC8 314 aa17.3■□□□□ 0.36
SUMO3-205ENST00000466861 CITED4Q96RK1 184 aa17.3■□□□□ 0.36
SUMO3-205ENST00000466861 HIGD1AQ9Y241 93 aa17.3■□□□□ 0.36
SUMO3-205ENST00000466861 ZNF98A6NK75 572 aa17.29■□□□□ 0.36
SUMO3-205ENST00000466861 CAMLGP49069 296 aa17.29■□□□□ 0.36
SUMO3-205ENST00000466861 NHLH2Q02577 135 aa17.29■□□□□ 0.36
SUMO3-205ENST00000466861 FGL1Q08830 312 aa17.29■□□□□ 0.36
SUMO3-205ENST00000466861 SPATA25Q9BR10 227 aa17.29■□□□□ 0.36
SUMO3-205ENST00000466861 U3KQK5 164 aa17.29■□□□□ 0.36
SUMO3-205ENST00000466861 ELOA3CA0A087WX78 387 aaPredicted RBP17.28■□□□□ 0.36
SUMO3-205ENST00000466861 KIR2DL5BA0A0G2JN68 375 aa17.28■□□□□ 0.36
SUMO3-205ENST00000466861 KIR2DL5BA0A0G2JPC4 375 aa17.28■□□□□ 0.36
SUMO3-205ENST00000466861 H3BRN7 92 aa17.28■□□□□ 0.36
SUMO3-205ENST00000466861 GIPP09681 153 aaPredicted RBP17.28■□□□□ 0.36
SUMO3-205ENST00000466861 RPL29P47914 159 aaKnown RBP17.28■□□□□ 0.36
SUMO3-205ENST00000466861 MEOX2P50222 304 aa17.28■□□□□ 0.36
SUMO3-205ENST00000466861 KIR2DL5AQ8N109 375 aa17.28■□□□□ 0.36
SUMO3-205ENST00000466861 OR5C1Q8NGR4 320 aa17.28■□□□□ 0.36
SUMO3-205ENST00000466861 KIR2DL5BQ8NHK3 375 aa17.28■□□□□ 0.36
SUMO3-205ENST00000466861 SHANK2-AS3Q9BTD1 123 aa17.28■□□□□ 0.36
SUMO3-205ENST00000466861 SLC25A39Q9BZJ4 359 aaPredicted RBP17.28■□□□□ 0.36
SUMO3-205ENST00000466861 GALR1P47211 349 aa17.27■□□□□ 0.36
SUMO3-205ENST00000466861 APOC4P55056 127 aa17.27■□□□□ 0.36
SUMO3-205ENST00000466861 SNRPD3P62318 126 aaKnown RBP17.27■□□□□ 0.36
SUMO3-205ENST00000466861 PRR20EP86478 221 aa17.27■□□□□ 0.36
SUMO3-205ENST00000466861 PRR20CP86479 221 aa17.27■□□□□ 0.36
SUMO3-205ENST00000466861 PRR20DP86480 221 aa17.27■□□□□ 0.36
SUMO3-205ENST00000466861 PRR20BP86481 221 aa17.27■□□□□ 0.36
SUMO3-205ENST00000466861 PRR20AP86496 221 aa17.27■□□□□ 0.36
SUMO3-205ENST00000466861 Q6ZRG5 221 aa17.27■□□□□ 0.36
SUMO3-205ENST00000466861 THAP6Q8TBB0 222 aa17.27■□□□□ 0.36
SUMO3-205ENST00000466861 ARL6Q9H0F7 186 aa17.27■□□□□ 0.36
SUMO3-205ENST00000466861 MBD2Q9UBB5 411 aa17.27■□□□□ 0.36
SUMO3-205ENST00000466861 UBE2L5PA0A1B0GUS4 154 aa17.26■□□□□ 0.35
SUMO3-205ENST00000466861 UBE2CO00762 179 aa17.26■□□□□ 0.35
SUMO3-205ENST00000466861 OR5G3P0C626 314 aa17.26■□□□□ 0.35
SUMO3-205ENST00000466861 DEFB131AP59861 70 aa17.26■□□□□ 0.35
SUMO3-205ENST00000466861 ARV1Q9H2C2 271 aa17.26■□□□□ 0.35
SUMO3-205ENST00000466861 HSPB11Q9Y547 144 aa17.26■□□□□ 0.35
SUMO3-205ENST00000466861 RPL7P18124 248 aaKnown RBP17.25■□□□□ 0.35
SUMO3-205ENST00000466861 RPL12P30050 165 aaKnown RBP17.25■□□□□ 0.35
SUMO3-205ENST00000466861 OPCMLQ14982 345 aa17.25■□□□□ 0.35
SUMO3-205ENST00000466861 COL7A1Q02388 2944 aa17.24■□□□□ 0.35
SUMO3-205ENST00000466861 FGF7P21781 194 aa17.24■□□□□ 0.35
SUMO3-205ENST00000466861 APRG1Q8IVJ8 170 aa17.24■□□□□ 0.35
SUMO3-205ENST00000466861 FAM24BQ8N5W8 94 aa17.24■□□□□ 0.35
SUMO3-205ENST00000466861 OR1L4Q8NGR5 311 aa17.24■□□□□ 0.35
SUMO3-205ENST00000466861 SLC25A32Q9H2D1 315 aa17.24■□□□□ 0.35
SUMO3-205ENST00000466861 KCNIP2Q9NS61 270 aa17.24■□□□□ 0.35
SUMO3-205ENST00000466861 DOK5Q9P104 306 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms