RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 SHPKQ9UHJ6 478 aa14.65□□□□□ -0.06
COL6A1-203ENST00000466285 PRM2P04554 102 aa14.64□□□□□ -0.07
COL6A1-203ENST00000466285 NUTF2P61970 127 aaKnown RBP14.64□□□□□ -0.07
COL6A1-203ENST00000466285 OR8G2PQ6IF36 304 aa14.64□□□□□ -0.07
COL6A1-203ENST00000466285 FOXI2Q6ZQN5 318 aa14.64□□□□□ -0.07
COL6A1-203ENST00000466285 OR4B1Q8NGF8 309 aa14.64□□□□□ -0.07
COL6A1-203ENST00000466285 MCUBQ9NWR8 336 aa14.64□□□□□ -0.07
COL6A1-203ENST00000466285 RABL2AQ9UBK7 228 aaPredicted RBP14.64□□□□□ -0.07
COL6A1-203ENST00000466285 RABL2BQ9UNT1 228 aa14.64□□□□□ -0.07
COL6A1-203ENST00000466285 U3KQ87 197 aa14.64□□□□□ -0.07
COL6A1-203ENST00000466285 MUC4Q99102 2169 aa14.64□□□□□ -0.07
COL6A1-203ENST00000466285 P0DMU3 169 aa14.63□□□□□ -0.07
COL6A1-203ENST00000466285 FAM231AP0DMU4 169 aa14.63□□□□□ -0.07
COL6A1-203ENST00000466285 FAM231CP0DMU5 169 aa14.63□□□□□ -0.07
COL6A1-203ENST00000466285 PSMB3P49720 205 aa14.63□□□□□ -0.07
COL6A1-203ENST00000466285 TMEM182Q6ZP80 229 aaPredicted RBP14.63□□□□□ -0.07
COL6A1-203ENST00000466285 LINC00299Q6ZSB3 139 aa14.63□□□□□ -0.07
COL6A1-203ENST00000466285 CENPSQ8N2Z9 138 aa14.63□□□□□ -0.07
COL6A1-203ENST00000466285 SLC25A32Q9H2D1 315 aa14.63□□□□□ -0.07
COL6A1-203ENST00000466285 PTTG2Q9NZH5 202 aa14.63□□□□□ -0.07
COL6A1-203ENST00000466285 V9GYH0 126 aa14.63□□□□□ -0.07
COL6A1-203ENST00000466285 PITX3O75364 302 aa14.62□□□□□ -0.07
COL6A1-203ENST00000466285 SPART-AS1P0CW21 52 aa14.62□□□□□ -0.07
COL6A1-203ENST00000466285 HTN3P15516 51 aa14.62□□□□□ -0.07
COL6A1-203ENST00000466285 FAM78BQ5VT40 261 aa14.62□□□□□ -0.07
COL6A1-203ENST00000466285 OR1S1Q8NH92 325 aa14.62□□□□□ -0.07
COL6A1-203ENST00000466285 COQ8AQ8NI60 647 aa14.62□□□□□ -0.07
COL6A1-203ENST00000466285 SLC35E1Q96K37 410 aa14.62□□□□□ -0.07
COL6A1-203ENST00000466285 RFNGQ9Y644 331 aa14.62□□□□□ -0.07
COL6A1-203ENST00000466285 A0A0J9YX75 114 aa14.61□□□□□ -0.07
COL6A1-203ENST00000466285 PRSS46E5RG02 174 aa14.61□□□□□ -0.07
COL6A1-203ENST00000466285 PRB4P10163 310 aaPredicted RBP14.61□□□□□ -0.07
COL6A1-203ENST00000466285 GATA2P23769 480 aaPredicted RBP14.61□□□□□ -0.07
COL6A1-203ENST00000466285 IGFL4Q6B9Z1 124 aa14.61□□□□□ -0.07
COL6A1-203ENST00000466285 AMTNQ6UX39 209 aa14.61□□□□□ -0.07
COL6A1-203ENST00000466285 Q6ZR54 194 aa14.61□□□□□ -0.07
COL6A1-203ENST00000466285 NOXA1Q86UR1 476 aa14.61□□□□□ -0.07
COL6A1-203ENST00000466285 YTHDF2Q9Y5A9 579 aaKnown RBP14.61□□□□□ -0.07
COL6A1-203ENST00000466285 PAX9P55771 341 aa14.6□□□□□ -0.07
COL6A1-203ENST00000466285 THAP8Q8NA92 274 aa14.6□□□□□ -0.07
COL6A1-203ENST00000466285 TRIM63Q969Q1 353 aa14.6□□□□□ -0.07
COL6A1-203ENST00000466285 KCNIP3Q9Y2W7 256 aa14.6□□□□□ -0.07
COL6A1-203ENST00000466285 LOC102723971A0A1B0GUV8 181 aa14.59□□□□□ -0.07
COL6A1-203ENST00000466285 GPX4P36969 197 aaPredicted RBP14.59□□□□□ -0.07
COL6A1-203ENST00000466285 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.59□□□□□ -0.07
COL6A1-203ENST00000466285 TMED4Q7Z7H5 227 aa14.59□□□□□ -0.07
COL6A1-203ENST00000466285 ZNF575Q86XF7 245 aa14.59□□□□□ -0.07
COL6A1-203ENST00000466285 TRGV9Q99603 122 aa14.59□□□□□ -0.07
COL6A1-203ENST00000466285 NIPSNAP3BQ9BS92 247 aa14.59□□□□□ -0.07
COL6A1-203ENST00000466285 MAGT1Q9H0U3 335 aa14.59□□□□□ -0.07
COL6A1-203ENST00000466285 SCP2D1Q9UJQ7 156 aa14.59□□□□□ -0.07
COL6A1-203ENST00000466285 LRP1BQ9NZR2 4599 aa14.59□□□□□ -0.07
COL6A1-203ENST00000466285 S100A5P33763 92 aa14.58□□□□□ -0.08
COL6A1-203ENST00000466285 PSG9Q00887 426 aa14.58□□□□□ -0.08
COL6A1-203ENST00000466285 LGALS9BQ3B8N2 356 aa14.58□□□□□ -0.08
COL6A1-203ENST00000466285 TMEM88Q6PEY1 159 aa14.58□□□□□ -0.08
COL6A1-203ENST00000466285 PPP1R14BQ96C90 147 aa14.58□□□□□ -0.08
COL6A1-203ENST00000466285 CLUHP3Q96NS8 147 aa14.58□□□□□ -0.08
COL6A1-203ENST00000466285 KRTAP4-5Q9BYR2 181 aa14.58□□□□□ -0.08
COL6A1-203ENST00000466285 SLC25A22Q9H936 323 aa14.58□□□□□ -0.08
COL6A1-203ENST00000466285 PAIP2BQ9ULR5 123 aaKnown RBP14.58□□□□□ -0.08
COL6A1-203ENST00000466285 SMIM9A6NGZ8 99 aa14.57□□□□□ -0.08
COL6A1-203ENST00000466285 A8MTW9 85 aa14.57□□□□□ -0.08
COL6A1-203ENST00000466285 ISLRO14498 428 aa14.57□□□□□ -0.08
COL6A1-203ENST00000466285 NUP62P37198 522 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-203ENST00000466285 ID1P41134 155 aa14.57□□□□□ -0.08
COL6A1-203ENST00000466285 C1orf194Q5T5A4 169 aa14.57□□□□□ -0.08
COL6A1-203ENST00000466285 UBE2DNLQ8IWF7 75 aa14.57□□□□□ -0.08
COL6A1-203ENST00000466285 OR8I2Q8N0Y5 310 aa14.57□□□□□ -0.08
COL6A1-203ENST00000466285 TRAV8-2A0A0B4J237 113 aa14.56□□□□□ -0.08
COL6A1-203ENST00000466285 TMEM189A5PLL7 270 aa14.56□□□□□ -0.08
COL6A1-203ENST00000466285 FABP12A6NFH5 140 aa14.56□□□□□ -0.08
COL6A1-203ENST00000466285 H3BP45 60 aa14.56□□□□□ -0.08
COL6A1-203ENST00000466285 RNF182Q8N6D2 247 aa14.56□□□□□ -0.08
COL6A1-203ENST00000466285 SNRPGP15A8MWD9 76 aa14.55□□□□□ -0.08
COL6A1-203ENST00000466285 M0R2Z0 102 aa14.55□□□□□ -0.08
COL6A1-203ENST00000466285 CRXO43186 299 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-203ENST00000466285 HBE1P02100 147 aa14.55□□□□□ -0.08
COL6A1-203ENST00000466285 MED14OSP0DP75 135 aa14.55□□□□□ -0.08
COL6A1-203ENST00000466285 C16orf92Q96LL3 132 aa14.55□□□□□ -0.08
COL6A1-203ENST00000466285 SDHCQ99643 169 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-203ENST00000466285 C7orf50Q9BRJ6 194 aaKnown RBP14.55□□□□□ -0.08
COL6A1-203ENST00000466285 SRRQ9GZT4 340 aa14.55□□□□□ -0.08
COL6A1-203ENST00000466285 DOK5Q9P104 306 aa14.55□□□□□ -0.08
COL6A1-203ENST00000466285 CACFD1Q9UGQ2 172 aa14.55□□□□□ -0.08
COL6A1-203ENST00000466285 GOLT1BQ9Y3E0 138 aa14.55□□□□□ -0.08
COL6A1-203ENST00000466285 ZNF98A6NK75 572 aa14.54□□□□□ -0.08
COL6A1-203ENST00000466285 ZNF705GA8MUZ8 300 aaPredicted RBP14.54□□□□□ -0.08
COL6A1-203ENST00000466285 SRPXP78539 464 aa14.54□□□□□ -0.08
COL6A1-203ENST00000466285 PPP1R1AQ13522 171 aa14.54□□□□□ -0.08
COL6A1-203ENST00000466285 SPINK13Q1W4C9 94 aa14.54□□□□□ -0.08
COL6A1-203ENST00000466285 BAP18Q8IXM2 172 aa14.54□□□□□ -0.08
COL6A1-203ENST00000466285 RSG1Q9BU20 258 aa14.54□□□□□ -0.08
COL6A1-203ENST00000466285 WRBO00258 174 aa14.53□□□□□ -0.08
COL6A1-203ENST00000466285 ANXA3P12429 323 aa14.53□□□□□ -0.08
COL6A1-203ENST00000466285 VAMP1P23763 118 aa14.53□□□□□ -0.08
COL6A1-203ENST00000466285 CNN1P51911 297 aaKnown RBP14.53□□□□□ -0.08
COL6A1-203ENST00000466285 SPANXN2Q5MJ10 180 aa14.53□□□□□ -0.08
COL6A1-203ENST00000466285 EBLN2Q6P2I7 272 aa14.53□□□□□ -0.08
COL6A1-203ENST00000466285 ACOT7LQ6ZUV0 252 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms