RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 HELTA6NFD8 242 aa13.76□□□□□ -0.21
HOXA9-203ENST00000465941 OR4C46A6NHA9 309 aa13.76□□□□□ -0.21
HOXA9-203ENST00000465941 MPDU1O75352 247 aa13.76□□□□□ -0.21
HOXA9-203ENST00000465941 LINC00869P0C866 280 aa13.76□□□□□ -0.21
HOXA9-203ENST00000465941 S100A7P31151 101 aa13.76□□□□□ -0.21
HOXA9-203ENST00000465941 CAMLGP49069 296 aa13.76□□□□□ -0.21
HOXA9-203ENST00000465941 AP2S1P53680 142 aaPredicted RBP13.76□□□□□ -0.21
HOXA9-203ENST00000465941 RPL11P62913 178 aaKnown RBP13.76□□□□□ -0.21
HOXA9-203ENST00000465941 PXDC1Q5TGL8 231 aa13.76□□□□□ -0.21
HOXA9-203ENST00000465941 OR1B1Q8NGR6 318 aa13.76□□□□□ -0.21
HOXA9-203ENST00000465941 SORL1Q92673 2214 aa13.76□□□□□ -0.21
HOXA9-203ENST00000465941 TRAV2A0A0B4J234 112 aa13.75□□□□□ -0.21
HOXA9-203ENST00000465941 A8MZ25 164 aa13.75□□□□□ -0.21
HOXA9-203ENST00000465941 HYPMO75409 117 aa13.75□□□□□ -0.21
HOXA9-203ENST00000465941 Q6ZNX1 250 aa13.75□□□□□ -0.21
HOXA9-203ENST00000465941 OR2T35Q8NGX2 323 aa13.75□□□□□ -0.21
HOXA9-203ENST00000465941 FAM110AQ9BQ89 295 aa13.75□□□□□ -0.21
HOXA9-203ENST00000465941 GGTLC1Q9BX51 225 aa13.75□□□□□ -0.21
HOXA9-203ENST00000465941 MS4A6AQ9H2W1 248 aa13.75□□□□□ -0.21
HOXA9-203ENST00000465941 C19orf73Q9NVV2 129 aa13.75□□□□□ -0.21
HOXA9-203ENST00000465941 IGKV3-7A0A075B6H7 116 aa13.74□□□□□ -0.21
HOXA9-203ENST00000465941 FGF7P21781 194 aa13.74□□□□□ -0.21
HOXA9-203ENST00000465941 RPL29P47914 159 aaKnown RBP13.74□□□□□ -0.21
HOXA9-203ENST00000465941 PRR20EP86478 221 aa13.74□□□□□ -0.21
HOXA9-203ENST00000465941 PRR20CP86479 221 aa13.74□□□□□ -0.21
HOXA9-203ENST00000465941 PRR20DP86480 221 aa13.74□□□□□ -0.21
HOXA9-203ENST00000465941 PRR20BP86481 221 aa13.74□□□□□ -0.21
HOXA9-203ENST00000465941 PRR20AP86496 221 aa13.74□□□□□ -0.21
HOXA9-203ENST00000465941 CLINT1Q14677 625 aa13.74□□□□□ -0.21
HOXA9-203ENST00000465941 GBGT1Q8N5D6 347 aa13.74□□□□□ -0.21
HOXA9-203ENST00000465941 PPP1R14BQ96C90 147 aa13.74□□□□□ -0.21
HOXA9-203ENST00000465941 ATP5SQ99766 215 aa13.74□□□□□ -0.21
HOXA9-203ENST00000465941 ARL6Q9H0F7 186 aa13.74□□□□□ -0.21
HOXA9-203ENST00000465941 FBXL17Q9UF56 701 aa13.74□□□□□ -0.21
HOXA9-203ENST00000465941 ZNF98A6NK75 572 aa13.73□□□□□ -0.21
HOXA9-203ENST00000465941 OR11H12B2RN74 326 aa13.73□□□□□ -0.21
HOXA9-203ENST00000465941 IGHV4-30-4P0DP06 118 aa13.73□□□□□ -0.21
HOXA9-203ENST00000465941 S100A7AQ86SG5 101 aa13.73□□□□□ -0.21
HOXA9-203ENST00000465941 AQP10Q96PS8 301 aa13.73□□□□□ -0.21
HOXA9-203ENST00000465941 HIGD1AQ9Y241 93 aa13.73□□□□□ -0.21
HOXA9-203ENST00000465941 G3V3Q6 166 aa13.72□□□□□ -0.21
HOXA9-203ENST00000465941 DNASE2O00115 360 aaPredicted RBP13.72□□□□□ -0.21
HOXA9-203ENST00000465941 OR5G3P0C626 314 aa13.72□□□□□ -0.21
HOXA9-203ENST00000465941 TFPI2P48307 235 aa13.72□□□□□ -0.21
HOXA9-203ENST00000465941 CMC4P56277 68 aaPredicted RBP13.72□□□□□ -0.21
HOXA9-203ENST00000465941 OPCMLQ14982 345 aa13.72□□□□□ -0.21
HOXA9-203ENST00000465941 PATE2Q6UY27 113 aa13.72□□□□□ -0.21
HOXA9-203ENST00000465941 SIGLEC15Q6ZMC9 328 aa13.72□□□□□ -0.21
HOXA9-203ENST00000465941 Q6ZRG5 221 aa13.72□□□□□ -0.21
HOXA9-203ENST00000465941 SHANK2-AS3Q9BTD1 123 aa13.72□□□□□ -0.21
HOXA9-203ENST00000465941 NPCDR1Q9BY65 106 aa13.72□□□□□ -0.21
HOXA9-203ENST00000465941 SLC25A39Q9BZJ4 359 aaPredicted RBP13.72□□□□□ -0.21
HOXA9-203ENST00000465941 WDR61Q9GZS3 305 aaKnown RBP13.72□□□□□ -0.21
HOXA9-203ENST00000465941 DOK5Q9P104 306 aa13.72□□□□□ -0.21
HOXA9-203ENST00000465941 ELOA3CA0A087WX78 387 aaPredicted RBP13.71□□□□□ -0.21
HOXA9-203ENST00000465941 MIC13Q5XKP0 118 aa13.71□□□□□ -0.21
HOXA9-203ENST00000465941 WFDC3Q8IUB2 231 aa13.71□□□□□ -0.21
HOXA9-203ENST00000465941 OR8I2Q8N0Y5 310 aa13.71□□□□□ -0.21
HOXA9-203ENST00000465941 DEFB125Q8N687 156 aa13.71□□□□□ -0.21
HOXA9-203ENST00000465941 STXBP6Q8NFX7 210 aa13.71□□□□□ -0.21
HOXA9-203ENST00000465941 DCANP1Q8TF63 244 aa13.71□□□□□ -0.21
HOXA9-203ENST00000465941 B9D2Q9BPU9 175 aa13.71□□□□□ -0.21
HOXA9-203ENST00000465941 ARV1Q9H2C2 271 aa13.71□□□□□ -0.21
HOXA9-203ENST00000465941 SLC39A9Q9NUM3 307 aa13.71□□□□□ -0.21
HOXA9-203ENST00000465941 H3BRN7 92 aa13.7□□□□□ -0.22
HOXA9-203ENST00000465941 K7EQG2 157 aa13.7□□□□□ -0.22
HOXA9-203ENST00000465941 ODF3L2Q3SX64 289 aa13.7□□□□□ -0.22
HOXA9-203ENST00000465941 INO80EQ8NBZ0 244 aaPredicted RBP13.7□□□□□ -0.22
HOXA9-203ENST00000465941 TMEM37Q8WXS4 190 aa13.7□□□□□ -0.22
HOXA9-203ENST00000465941 GPR82Q96P67 336 aa13.7□□□□□ -0.22
HOXA9-203ENST00000465941 PARD6GQ9BYG4 376 aaPredicted RBP13.7□□□□□ -0.22
HOXA9-203ENST00000465941 SMIM3Q9BZL3 60 aa13.7□□□□□ -0.22
HOXA9-203ENST00000465941 TUBA4BQ9H853 241 aa13.7□□□□□ -0.22
HOXA9-203ENST00000465941 WFDC1Q9HC57 220 aa13.7□□□□□ -0.22
HOXA9-203ENST00000465941 DNAJC4Q9NNZ3 241 aa13.7□□□□□ -0.22
HOXA9-203ENST00000465941 NRN1Q9NPD7 142 aa13.7□□□□□ -0.22
HOXA9-203ENST00000465941 TNFSF18Q9UNG2 199 aa13.7□□□□□ -0.22
HOXA9-203ENST00000465941 RNF24Q9Y225 148 aa13.7□□□□□ -0.22
HOXA9-203ENST00000465941 FXYD6-FXYD2A0A087WZ82 144 aa13.69□□□□□ -0.22
HOXA9-203ENST00000465941 COX7A2P2O60397 106 aa13.69□□□□□ -0.22
HOXA9-203ENST00000465941 IFNA5P01569 189 aa13.69□□□□□ -0.22
HOXA9-203ENST00000465941 FRMD6-AS1P0C7T7 363 aa13.69□□□□□ -0.22
HOXA9-203ENST00000465941 B2MP61769 119 aa13.69□□□□□ -0.22
HOXA9-203ENST00000465941 UHRF2Q96PU4 802 aa13.69□□□□□ -0.22
HOXA9-203ENST00000465941 SCRT1Q9BWW7 348 aa13.69□□□□□ -0.22
HOXA9-203ENST00000465941 WFDC10AQ9H1F0 79 aa13.69□□□□□ -0.22
HOXA9-203ENST00000465941 SLC25A22Q9H936 323 aa13.69□□□□□ -0.22
HOXA9-203ENST00000465941 PXMP4Q9Y6I8 212 aa13.69□□□□□ -0.22
HOXA9-203ENST00000465941 C10orf113Q5VZT2 155 aa13.68□□□□□ -0.22
HOXA9-203ENST00000465941 LEMD1Q68G75 181 aa13.68□□□□□ -0.22
HOXA9-203ENST00000465941 LINC00305Q7Z4B0 112 aa13.68□□□□□ -0.22
HOXA9-203ENST00000465941 ZNF709Q8N972 641 aa13.68□□□□□ -0.22
HOXA9-203ENST00000465941 OR1L4Q8NGR5 311 aa13.68□□□□□ -0.22
HOXA9-203ENST00000465941 SCGB1C1Q8TD33 95 aa13.68□□□□□ -0.22
HOXA9-203ENST00000465941 SLC25A32Q9H2D1 315 aa13.68□□□□□ -0.22
HOXA9-203ENST00000465941 SEPSECSQ9HD40 501 aaKnown RBP13.68□□□□□ -0.22
HOXA9-203ENST00000465941 KCNIP2Q9NS61 270 aa13.68□□□□□ -0.22
HOXA9-203ENST00000465941 UBQLN2Q9UHD9 624 aa13.68□□□□□ -0.22
HOXA9-203ENST00000465941 RNF222A6NCQ9 220 aa13.67□□□□□ -0.22
HOXA9-203ENST00000465941 C17orf112F2Z3M2 114 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms