RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 FAM106CPP0CH98 169 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 PSG1P11464 419 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 ARL17AQ8IVW1 177 aa7.42□□□□□ -1.22
HPS4-208ENST00000464362 RNASEH2CQ8TDP1 164 aaKnown RBP7.42□□□□□ -1.22
HPS4-208ENST00000464362 USP9XQ93008 2570 aaPredicted RBP7.41□□□□□ -1.22
HPS4-208ENST00000464362 OBSL1O75147 1896 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 DENND4AQ7Z401 1863 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 NPIPB5A8MRT5 1133 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 H3BVH4 76 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 IGHV3-11P01762 117 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 NPSP0C0P6 89 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 MEF2CQ06413 473 aaPredicted RBP7.41□□□□□ -1.22
HPS4-208ENST00000464362 ZNF414Q96IQ9 312 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 MAP1LC3AQ9H492 121 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 ANKRD11Q6UB99 2663 aaPredicted RBP7.41□□□□□ -1.22
HPS4-208ENST00000464362 hDV102S1A0JD36 115 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 PRSS47A8MTI9 375 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 WISP2O76076 250 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 C1orf194Q5T5A4 169 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 GNB1LQ9BYB4 327 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 NAV3Q8IVL0 2385 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.41□□□□□ -1.22
HPS4-208ENST00000464362 WNT2P09544 360 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 PSMB2P49721 201 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 ATP5IP56385 69 aaPredicted RBP7.41□□□□□ -1.22
HPS4-208ENST00000464362 KLRD1Q13241 179 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 METTL26Q96S19 204 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 HIVEP3Q5T1R4 2406 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 TNFSF13O75888 250 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 NCR2O95944 276 aa7.41□□□□□ -1.22
HPS4-208ENST00000464362 A8MWP6 167 aa7.4□□□□□ -1.22
HPS4-208ENST00000464362 ERVK11-1P61568 191 aa7.4□□□□□ -1.22
HPS4-208ENST00000464362 DNLZQ5SXM8 178 aa7.4□□□□□ -1.22
HPS4-208ENST00000464362 UNQ6494/PRO21346Q6UXR6 183 aa7.4□□□□□ -1.22
HPS4-208ENST00000464362 CLEC19AQ6UXS0 136 aa7.4□□□□□ -1.22
HPS4-208ENST00000464362 GLMPQ8WWB7 406 aa7.4□□□□□ -1.22
HPS4-208ENST00000464362 RNF125Q96EQ8 232 aa7.4□□□□□ -1.22
HPS4-208ENST00000464362 POLR3KQ9Y2Y1 108 aaPredicted RBP7.4□□□□□ -1.22
HPS4-208ENST00000464362 PHLDA3Q9Y5J5 127 aa7.4□□□□□ -1.22
HPS4-208ENST00000464362 DKK1O94907 266 aa7.4□□□□□ -1.22
HPS4-208ENST00000464362 DGAT2L7PQ6IED9 249 aa7.4□□□□□ -1.22
HPS4-208ENST00000464362 NUP35Q8NFH5 326 aa7.4□□□□□ -1.22
HPS4-208ENST00000464362 SNHG12Q9BXW3 62 aa7.4□□□□□ -1.22
HPS4-208ENST00000464362 F2Z2F3 143 aa7.4□□□□□ -1.23
HPS4-208ENST00000464362 RNASE2P10153 161 aaKnown RBP7.4□□□□□ -1.23
HPS4-208ENST00000464362 EVI2AP22794 236 aa7.4□□□□□ -1.23
HPS4-208ENST00000464362 HIST1H1AQ02539 215 aaPredicted RBP7.4□□□□□ -1.23
HPS4-208ENST00000464362 Q8TAT8 98 aa7.4□□□□□ -1.23
HPS4-208ENST00000464362 GAFA1Q96PS6 74 aa7.4□□□□□ -1.23
HPS4-208ENST00000464362 PSG8Q9UQ74 426 aa7.4□□□□□ -1.23
HPS4-208ENST00000464362 PRUNE2Q8WUY3 3088 aa7.4□□□□□ -1.23
HPS4-208ENST00000464362 RPL15P61313 204 aaKnown RBP7.39□□□□□ -1.23
HPS4-208ENST00000464362 DIAPH2-AS1Q14236 149 aa7.39□□□□□ -1.23
HPS4-208ENST00000464362 LYPD6BQ8NI32 183 aa7.39□□□□□ -1.23
HPS4-208ENST00000464362 WFDC12Q8WWY7 111 aa7.39□□□□□ -1.23
HPS4-208ENST00000464362 HIST1H4GQ99525 98 aa7.39□□□□□ -1.23
HPS4-208ENST00000464362 SPTBN4Q9H254 2564 aa7.39□□□□□ -1.23
HPS4-208ENST00000464362 TRAV9-2A0A087WT02 112 aa7.39□□□□□ -1.23
HPS4-208ENST00000464362 GPX1P07203 203 aa7.39□□□□□ -1.23
HPS4-208ENST00000464362 NPPCP23582 126 aa7.39□□□□□ -1.23
HPS4-208ENST00000464362 TMPRSS3P57727 454 aa7.39□□□□□ -1.23
HPS4-208ENST00000464362 MTURNQ8N3F0 131 aa7.39□□□□□ -1.23
HPS4-208ENST00000464362 TSKUQ8WUA8 353 aa7.39□□□□□ -1.23
HPS4-208ENST00000464362 NUP210Q8TEM1 1887 aaPredicted RBP7.39□□□□□ -1.23
HPS4-208ENST00000464362 H0YJW9 148 aa7.39□□□□□ -1.23
HPS4-208ENST00000464362 CACNG7P62955 275 aa7.39□□□□□ -1.23
HPS4-208ENST00000464362 FBLN7Q53RD9 439 aa7.39□□□□□ -1.23
HPS4-208ENST00000464362 OR1N2Q8NGR9 330 aa7.39□□□□□ -1.23
HPS4-208ENST00000464362 IGFBPL1Q8WX77 278 aa7.39□□□□□ -1.23
HPS4-208ENST00000464362 COL25A1Q9BXS0 654 aaPredicted RBP7.39□□□□□ -1.23
HPS4-208ENST00000464362 MEGF9Q9H1U4 602 aa7.39□□□□□ -1.23
HPS4-208ENST00000464362 COL4A4P53420 1690 aaPredicted RBP7.39□□□□□ -1.23
HPS4-208ENST00000464362 IGKV2-40A0A087WW87 121 aaPredicted RBP7.38□□□□□ -1.23
HPS4-208ENST00000464362 A1L4Q6 167 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 C9JCJ5 164 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 ITGB1BP1O14713 200 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 IGKV2D-40P01614 121 aaPredicted RBP7.38□□□□□ -1.23
HPS4-208ENST00000464362 CNTFRP26992 372 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 TMEM30BQ3MIR4 351 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 ARPC1AQ92747 370 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 FOXC2Q99958 501 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 CHODLQ9H9P2 273 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 ZNF106Q9H2Y7 1883 aaKnown RBP7.38□□□□□ -1.23
HPS4-208ENST00000464362 TRAV9-1A0A075B6T8 112 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 GGTLC3B5MD39 225 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 FABP2P12104 132 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 SPRNQ5BIV9 151 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 Q6ZPA2 131 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 OR10J6PQ8NGY7 276 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 ZNF257Q9Y2Q1 563 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 DSCAML1Q8TD84 2053 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 H3BUT2 72 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 NBR2O15453 112 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 IGHV1-8P0DP01 117 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 ADIPOQQ15848 244 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 FER1L6-AS1Q8NA97 138 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 FMC1Q96HJ9 113 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 TPSG1Q9NRR2 321 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 USP34Q70CQ2 3546 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 TRAV30A0A087WSZ9 112 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms