RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 FAM78BQ5VT40 261 aa16.04■□□□□ 0.16
USP4-208ENST00000464168 GOLT1BQ9Y3E0 138 aa16.04■□□□□ 0.16
USP4-208ENST00000464168 A0A0B4J2A0 478 aa16.03■□□□□ 0.16
USP4-208ENST00000464168 ISLRO14498 428 aa16.03■□□□□ 0.16
USP4-208ENST00000464168 ATP5IP56385 69 aaPredicted RBP16.03■□□□□ 0.16
USP4-208ENST00000464168 SHPKQ9UHJ6 478 aa16.03■□□□□ 0.16
USP4-208ENST00000464168 YTHDF2Q9Y5A9 579 aaKnown RBP16.03■□□□□ 0.16
USP4-208ENST00000464168 A0A0J9YX75 114 aa16.02■□□□□ 0.16
USP4-208ENST00000464168 LOC102723971A0A1B0GUV8 181 aa16.02■□□□□ 0.16
USP4-208ENST00000464168 SNRPGP15A8MWD9 76 aa16.02■□□□□ 0.16
USP4-208ENST00000464168 CTDSPLO15194 276 aa16.02■□□□□ 0.16
USP4-208ENST00000464168 HBE1P02100 147 aa16.02■□□□□ 0.16
USP4-208ENST00000464168 OR2F1Q13607 317 aa16.02■□□□□ 0.16
USP4-208ENST00000464168 EBLN2Q6P2I7 272 aa16.02■□□□□ 0.16
USP4-208ENST00000464168 ZNF575Q86XF7 245 aa16.02■□□□□ 0.16
USP4-208ENST00000464168 CLVS1Q8IUQ0 354 aaPredicted RBP16.02■□□□□ 0.16
USP4-208ENST00000464168 SLC35E1Q96K37 410 aa16.02■□□□□ 0.16
USP4-208ENST00000464168 C7orf50Q9BRJ6 194 aaKnown RBP16.02■□□□□ 0.16
USP4-208ENST00000464168 FABP1P07148 127 aa16.01■□□□□ 0.15
USP4-208ENST00000464168 SMIM18P0DKX4 95 aa16.01■□□□□ 0.15
USP4-208ENST00000464168 SOHLH1Q5JUK2 328 aa16.01■□□□□ 0.15
USP4-208ENST00000464168 TMEM88Q6PEY1 159 aa16.01■□□□□ 0.15
USP4-208ENST00000464168 OR8I2Q8N0Y5 310 aa16.01■□□□□ 0.15
USP4-208ENST00000464168 C20orf173Q96LM9 149 aa16.01■□□□□ 0.15
USP4-208ENST00000464168 KRTAP4-5Q9BYR2 181 aa16.01■□□□□ 0.15
USP4-208ENST00000464168 HSPG2P98160 4391 aa16.01■□□□□ 0.15
USP4-208ENST00000464168 ANKRD20A5PA0PJZ0 165 aa16■□□□□ 0.15
USP4-208ENST00000464168 AKR1C4P17516 323 aa16■□□□□ 0.15
USP4-208ENST00000464168 RRN3P1Q2M238 152 aa16■□□□□ 0.15
USP4-208ENST00000464168 C1orf134Q5TEV5 83 aa16■□□□□ 0.15
USP4-208ENST00000464168 PPP1R14BQ96C90 147 aa16■□□□□ 0.15
USP4-208ENST00000464168 TRGV9Q99603 122 aa16■□□□□ 0.15
USP4-208ENST00000464168 IGKV1OR2-108A0A075B7D4 117 aa15.99■□□□□ 0.15
USP4-208ENST00000464168 DAD1P61803 113 aa15.99■□□□□ 0.15
USP4-208ENST00000464168 C17orf77Q96MU5 243 aa15.99■□□□□ 0.15
USP4-208ENST00000464168 SCGB3A2Q96PL1 93 aa15.99■□□□□ 0.15
USP4-208ENST00000464168 RPRMQ9NS64 109 aa15.99■□□□□ 0.15
USP4-208ENST00000464168 NACAE9PAV3 2078 aa15.98■□□□□ 0.15
USP4-208ENST00000464168 A8MTW9 85 aa15.98■□□□□ 0.15
USP4-208ENST00000464168 IL18Q14116 193 aa15.98■□□□□ 0.15
USP4-208ENST00000464168 SPCS2Q15005 226 aa15.98■□□□□ 0.15
USP4-208ENST00000464168 SAMD13Q5VXD3 122 aa15.98■□□□□ 0.15
USP4-208ENST00000464168 AMTNQ6UX39 209 aa15.98■□□□□ 0.15
USP4-208ENST00000464168 OR1S1Q8NH92 325 aa15.98■□□□□ 0.15
USP4-208ENST00000464168 DIRAS2Q96HU8 199 aa15.98■□□□□ 0.15
USP4-208ENST00000464168 MAGT1Q9H0U3 335 aa15.98■□□□□ 0.15
USP4-208ENST00000464168 DOK5Q9P104 306 aa15.98■□□□□ 0.15
USP4-208ENST00000464168 SCP2D1Q9UJQ7 156 aa15.98■□□□□ 0.15
USP4-208ENST00000464168 PITX3O75364 302 aa15.97■□□□□ 0.15
USP4-208ENST00000464168 THAP8Q8NA92 274 aa15.97■□□□□ 0.15
USP4-208ENST00000464168 C16orf92Q96LL3 132 aa15.97■□□□□ 0.15
USP4-208ENST00000464168 IGF2BP2-AS1Q96M15 143 aa15.97■□□□□ 0.15
USP4-208ENST00000464168 MEOX2P50222 304 aa15.96■□□□□ 0.15
USP4-208ENST00000464168 SRPXP78539 464 aa15.96■□□□□ 0.15
USP4-208ENST00000464168 RSG1Q9BU20 258 aa15.96■□□□□ 0.15
USP4-208ENST00000464168 SLC25A32Q9H2D1 315 aa15.96■□□□□ 0.15
USP4-208ENST00000464168 RABL2AQ9UBK7 228 aaPredicted RBP15.96■□□□□ 0.15
USP4-208ENST00000464168 RABL2BQ9UNT1 228 aa15.96■□□□□ 0.15
USP4-208ENST00000464168 PRM2P04554 102 aa15.95■□□□□ 0.14
USP4-208ENST00000464168 GALR1P47211 349 aa15.95■□□□□ 0.14
USP4-208ENST00000464168 TMEM208Q9BTX3 173 aa15.95■□□□□ 0.14
USP4-208ENST00000464168 MCUBQ9NWR8 336 aa15.95■□□□□ 0.14
USP4-208ENST00000464168 ZNF98A6NK75 572 aa15.94■□□□□ 0.14
USP4-208ENST00000464168 IAPPP10997 89 aa15.94■□□□□ 0.14
USP4-208ENST00000464168 ANXA3P12429 323 aa15.94■□□□□ 0.14
USP4-208ENST00000464168 FAM3BP58499 235 aaPredicted RBP15.94■□□□□ 0.14
USP4-208ENST00000464168 RAB11AP62491 216 aa15.94■□□□□ 0.14
USP4-208ENST00000464168 C15orf53Q8NAA6 179 aa15.94■□□□□ 0.14
USP4-208ENST00000464168 SLC25A22Q9H936 323 aa15.94■□□□□ 0.14
USP4-208ENST00000464168 TMED3Q9Y3Q3 217 aa15.94■□□□□ 0.14
USP4-208ENST00000464168 ZNF705GA8MUZ8 300 aaPredicted RBP15.93■□□□□ 0.14
USP4-208ENST00000464168 CFDP00746 253 aaPredicted RBP15.93■□□□□ 0.14
USP4-208ENST00000464168 GGNBP1Q5YKI7 109 aa15.93■□□□□ 0.14
USP4-208ENST00000464168 PAIP2BQ9ULR5 123 aaKnown RBP15.93■□□□□ 0.14
USP4-208ENST00000464168 SLC45A2Q9UMX9 530 aa15.93■□□□□ 0.14
USP4-208ENST00000464168 LRP1BQ9NZR2 4599 aa15.93■□□□□ 0.14
USP4-208ENST00000464168 CRXO43186 299 aaPredicted RBP15.92■□□□□ 0.14
USP4-208ENST00000464168 ALDH3B2P48448 385 aa15.92■□□□□ 0.14
USP4-208ENST00000464168 CNN1P51911 297 aaKnown RBP15.92■□□□□ 0.14
USP4-208ENST00000464168 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.92■□□□□ 0.14
USP4-208ENST00000464168 OR11H7Q8NGC8 314 aa15.92■□□□□ 0.14
USP4-208ENST00000464168 OR4D5Q8NGN0 318 aa15.92■□□□□ 0.14
USP4-208ENST00000464168 DUXBA0A1W2PPF3 345 aa15.91■□□□□ 0.14
USP4-208ENST00000464168 PRSS46E5RG02 174 aa15.91■□□□□ 0.14
USP4-208ENST00000464168 M0R2Z0 102 aa15.91■□□□□ 0.14
USP4-208ENST00000464168 SPINK13Q1W4C9 94 aa15.91■□□□□ 0.14
USP4-208ENST00000464168 IGFL4Q6B9Z1 124 aa15.91■□□□□ 0.14
USP4-208ENST00000464168 TMEM182Q6ZP80 229 aaPredicted RBP15.91■□□□□ 0.14
USP4-208ENST00000464168 GPR141Q7Z602 305 aa15.91■□□□□ 0.14
USP4-208ENST00000464168 RSL24D1Q9UHA3 163 aaKnown RBP15.91■□□□□ 0.14
USP4-208ENST00000464168 TRAV8-2A0A0B4J237 113 aa15.9■□□□□ 0.14
USP4-208ENST00000464168 LYRM9A8MSI8 78 aa15.9■□□□□ 0.14
USP4-208ENST00000464168 GATA2P23769 480 aaPredicted RBP15.9■□□□□ 0.14
USP4-208ENST00000464168 TNP2Q05952 138 aa15.9■□□□□ 0.14
USP4-208ENST00000464168 DYNC2LI1Q8TCX1 351 aa15.9■□□□□ 0.14
USP4-208ENST00000464168 SOSTQ9BQB4 213 aa15.9■□□□□ 0.14
USP4-208ENST00000464168 PIGBOS1A0A0B4J2F0 54 aa15.89■□□□□ 0.13
USP4-208ENST00000464168 DUSP14O95147 198 aaKnown RBP15.89■□□□□ 0.13
USP4-208ENST00000464168 SLC25A6P12236 298 aa15.89■□□□□ 0.13
USP4-208ENST00000464168 ORM2P19652 201 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms