RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 LGALS4P56470 323 aa7.85□□□□□ -1.15
PTPRD-207ENST00000463477 ARF6P62330 175 aa7.85□□□□□ -1.15
PTPRD-207ENST00000463477 TIGITQ495A1 244 aa7.85□□□□□ -1.15
PTPRD-207ENST00000463477 CENPWQ5EE01 88 aa7.85□□□□□ -1.15
PTPRD-207ENST00000463477 PATE2Q6UY27 113 aa7.85□□□□□ -1.15
PTPRD-207ENST00000463477 C1orf122Q6ZSJ8 110 aa7.85□□□□□ -1.15
PTPRD-207ENST00000463477 PPP1R27Q86WC6 154 aa7.85□□□□□ -1.15
PTPRD-207ENST00000463477 ZNF418Q8TF45 676 aaPredicted RBP7.85□□□□□ -1.15
PTPRD-207ENST00000463477 RITA1Q96K30 269 aa7.85□□□□□ -1.15
PTPRD-207ENST00000463477 IGF2BP2-AS1Q96M15 143 aa7.85□□□□□ -1.15
PTPRD-207ENST00000463477 TPSG1Q9NRR2 321 aa7.85□□□□□ -1.15
PTPRD-207ENST00000463477 AURKAIP1Q9NWT8 199 aaPredicted RBP7.85□□□□□ -1.15
PTPRD-207ENST00000463477 TRAPPC1Q9Y5R8 145 aa7.85□□□□□ -1.15
PTPRD-207ENST00000463477 V9GYV3 84 aa7.85□□□□□ -1.15
PTPRD-207ENST00000463477 M0R1W7 72 aa7.84□□□□□ -1.15
PTPRD-207ENST00000463477 TOX4O94842 621 aa7.84□□□□□ -1.15
PTPRD-207ENST00000463477 AMBPP02760 352 aa7.84□□□□□ -1.15
PTPRD-207ENST00000463477 UBE2L3P68036 154 aaKnown RBP7.84□□□□□ -1.15
PTPRD-207ENST00000463477 JOSD1Q15040 202 aaPredicted RBP7.84□□□□□ -1.15
PTPRD-207ENST00000463477 RPEL1Q2QD12 228 aa7.84□□□□□ -1.15
PTPRD-207ENST00000463477 C9orf139Q6ZV77 190 aa7.84□□□□□ -1.15
PTPRD-207ENST00000463477 OR5AU1Q8NGC0 362 aa7.84□□□□□ -1.15
PTPRD-207ENST00000463477 OR11H6Q8NGC7 330 aa7.84□□□□□ -1.15
PTPRD-207ENST00000463477 TMEM158Q8WZ71 300 aa7.84□□□□□ -1.15
PTPRD-207ENST00000463477 MDFIQ99750 246 aa7.84□□□□□ -1.15
PTPRD-207ENST00000463477 PAXXQ9BUH6 204 aa7.84□□□□□ -1.15
PTPRD-207ENST00000463477 SIRPDQ9H106 197 aa7.84□□□□□ -1.15
PTPRD-207ENST00000463477 ZNF355PQ9NSJ1 428 aa7.84□□□□□ -1.15
PTPRD-207ENST00000463477 F11RQ9Y624 299 aaKnown RBP7.84□□□□□ -1.15
PTPRD-207ENST00000463477 LINC00587B1AMM8 73 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 TEX22C9J3V5 150 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 IGLV2-8P01709 118 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 IGHV4-38-2P0DP08 117 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 MYCNOSP40205 109 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 HILS1P60008 231 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 SUMO1P63165 101 aaKnown RBP7.83□□□□□ -1.16
PTPRD-207ENST00000463477 SSBP2P81877 361 aaPredicted RBP7.83□□□□□ -1.16
PTPRD-207ENST00000463477 TNXAQ16473 311 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 FAM231DQ6ZW35 169 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 KIR3DL3Q8N743 410 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 RPEQ96AT9 228 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 TMEM18Q96B42 140 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 FXYD5Q96DB9 178 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 SMIM12Q96EX1 92 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 TBX15Q96SF7 602 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 TNFRSF19Q9NS68 423 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 CENPVL3A0A0U1RRI6 287 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 MT-ND6P03923 174 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 MFAP2P55001 183 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 ERVFC1-1P60608 527 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 ZNF90Q03938 601 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 PDZD11Q5EBL8 140 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 OR1L6Q8NGR2 347 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 JMJD8Q96S16 334 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 GNB1LQ9BYB4 327 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 PRDM13Q9H4Q3 707 aa7.83□□□□□ -1.16
PTPRD-207ENST00000463477 MRPL36Q9P0J6 103 aaKnown RBP7.83□□□□□ -1.16
PTPRD-207ENST00000463477 IGHV3-72A0A0B4J1Y9 119 aa7.82□□□□□ -1.16
PTPRD-207ENST00000463477 TRAV40A0A0B4J280 105 aa7.82□□□□□ -1.16
PTPRD-207ENST00000463477 ESDP10768 282 aa7.82□□□□□ -1.16
PTPRD-207ENST00000463477 CEACAM3P40198 252 aa7.82□□□□□ -1.16
PTPRD-207ENST00000463477 TPTE2P1Q5T6R2 138 aa7.82□□□□□ -1.16
PTPRD-207ENST00000463477 MORN5Q5VZ52 161 aa7.82□□□□□ -1.16
PTPRD-207ENST00000463477 WDR73Q6P4I2 378 aa7.82□□□□□ -1.16
PTPRD-207ENST00000463477 ZNF329Q86UD4 541 aa7.82□□□□□ -1.16
PTPRD-207ENST00000463477 BCL6BQ8N143 479 aaPredicted RBP7.82□□□□□ -1.16
PTPRD-207ENST00000463477 GBGT1Q8N5D6 347 aa7.82□□□□□ -1.16
PTPRD-207ENST00000463477 STAB1Q9NY15 2570 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 TRAV5A0A0B4J249 113 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 SMIM27A0A1W2PRY6 76 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 ODF3BA8MYP8 253 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 NDUFA3O95167 84 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 PRTN3P24158 256 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 CNTFRP26992 372 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 HTR1DP28221 377 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 ADMP35318 185 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 CX3CL1P78423 397 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 KRTAP24-1Q3LI83 254 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 LINC00305Q7Z4B0 112 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 VMO1Q7Z5L0 202 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 NPBQ8NG41 125 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 SRSF12Q8WXF0 261 aaKnown RBP7.81□□□□□ -1.16
PTPRD-207ENST00000463477 MISP3Q96FF7 219 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 CHRDL1Q9BU40 450 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 DPM3Q9P2X0 92 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 ONECUT1Q9UBC0 465 aa7.81□□□□□ -1.16
PTPRD-207ENST00000463477 IGHV3OR16-10A0A075B7F0 116 aa7.8□□□□□ -1.16
PTPRD-207ENST00000463477 IGHV1-69DA0A0B4J2H0 117 aa7.8□□□□□ -1.16
PTPRD-207ENST00000463477 OOSP1A8MZH6 123 aa7.8□□□□□ -1.16
PTPRD-207ENST00000463477 SLC17A3O00476 420 aa7.8□□□□□ -1.16
PTPRD-207ENST00000463477 PEX7O00628 323 aa7.8□□□□□ -1.16
PTPRD-207ENST00000463477 HYPMO75409 117 aa7.8□□□□□ -1.16
PTPRD-207ENST00000463477 IGHV1-69P01742 117 aa7.8□□□□□ -1.16
PTPRD-207ENST00000463477 REG1AP05451 166 aa7.8□□□□□ -1.16
PTPRD-207ENST00000463477 COX7A1P24310 79 aa7.8□□□□□ -1.16
PTPRD-207ENST00000463477 IBA57Q5T440 356 aaKnown RBP7.8□□□□□ -1.16
PTPRD-207ENST00000463477 HCP5Q6MZN7 132 aa7.8□□□□□ -1.16
PTPRD-207ENST00000463477 RASL11AQ6T310 242 aa7.8□□□□□ -1.16
PTPRD-207ENST00000463477 SPATA3Q8NHX4 192 aa7.8□□□□□ -1.16
PTPRD-207ENST00000463477 CFHR4Q92496 578 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms