RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 Q5BKY6 102 aa12.39□□□□□ -0.43
HLA-DPA1-245ENST00000463066 TEPPQ6URK8 271 aa12.39□□□□□ -0.43
HLA-DPA1-245ENST00000463066 APRG1Q8IVJ8 170 aa12.39□□□□□ -0.43
HLA-DPA1-245ENST00000463066 OR1B1Q8NGR6 318 aa12.39□□□□□ -0.43
HLA-DPA1-245ENST00000463066 TMEM147Q9BVK8 224 aa12.39□□□□□ -0.43
HLA-DPA1-245ENST00000463066 UQCC1Q9NVA1 299 aa12.39□□□□□ -0.43
HLA-DPA1-245ENST00000463066 SLC45A2Q9UMX9 530 aa12.39□□□□□ -0.43
HLA-DPA1-245ENST00000463066 WDR83OSQ9Y284 106 aa12.39□□□□□ -0.43
HLA-DPA1-245ENST00000463066 DNASE2O00115 360 aaPredicted RBP12.38□□□□□ -0.43
HLA-DPA1-245ENST00000463066 CLINT1Q14677 625 aa12.38□□□□□ -0.43
HLA-DPA1-245ENST00000463066 VWC2Q2TAL6 325 aa12.38□□□□□ -0.43
HLA-DPA1-245ENST00000463066 LEMD1Q68G75 181 aa12.38□□□□□ -0.43
HLA-DPA1-245ENST00000463066 LINC00322Q6ZN03 302 aaPredicted RBP12.38□□□□□ -0.43
HLA-DPA1-245ENST00000463066 PPP1R14BQ96C90 147 aa12.38□□□□□ -0.43
HLA-DPA1-245ENST00000463066 SCRT1Q9BWW7 348 aa12.38□□□□□ -0.43
HLA-DPA1-245ENST00000463066 MAP6D1Q9H9H5 199 aa12.38□□□□□ -0.43
HLA-DPA1-245ENST00000463066 K7EQG2 157 aa12.37□□□□□ -0.43
HLA-DPA1-245ENST00000463066 S100A11P31949 105 aa12.37□□□□□ -0.43
HLA-DPA1-245ENST00000463066 HAGHQ16775 308 aa12.37□□□□□ -0.43
HLA-DPA1-245ENST00000463066 PATE2Q6UY27 113 aa12.37□□□□□ -0.43
HLA-DPA1-245ENST00000463066 OR5C1Q8NGR4 320 aa12.37□□□□□ -0.43
HLA-DPA1-245ENST00000463066 SLC25A31Q9H0C2 315 aa12.37□□□□□ -0.43
HLA-DPA1-245ENST00000463066 CFDP00746 253 aaPredicted RBP12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 OR5G3P0C626 314 aa12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 CAMLGP49069 296 aa12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 SELENOTP62341 195 aa12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 PAFAH1B2P68402 229 aa12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 HBG1P69891 147 aa12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 HBG2P69892 147 aa12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 BAXQ07812 192 aa12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 MIC13Q5XKP0 118 aa12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 SIGLEC15Q6ZMC9 328 aa12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 THAP6Q8TBB0 222 aa12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 DCANP1Q8TF63 244 aa12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 UHRF2Q96PU4 802 aa12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 GGTLC1Q9BX51 225 aa12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 SMIM3Q9BZL3 60 aa12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 ARL6Q9H0F7 186 aa12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 SLC25A32Q9H2D1 315 aa12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 SLC25A22Q9H936 323 aa12.36□□□□□ -0.43
HLA-DPA1-245ENST00000463066 HELTA6NFD8 242 aa12.35□□□□□ -0.43
HLA-DPA1-245ENST00000463066 ZNF98A6NK75 572 aa12.35□□□□□ -0.43
HLA-DPA1-245ENST00000463066 HYPMO75409 117 aa12.35□□□□□ -0.43
HLA-DPA1-245ENST00000463066 CD5P06127 495 aa12.35□□□□□ -0.43
HLA-DPA1-245ENST00000463066 ZNF688P0C7X2 276 aa12.35□□□□□ -0.43
HLA-DPA1-245ENST00000463066 LYL1P12980 280 aa12.35□□□□□ -0.43
HLA-DPA1-245ENST00000463066 FGF7P21781 194 aa12.35□□□□□ -0.43
HLA-DPA1-245ENST00000463066 DEFB131AP59861 70 aa12.35□□□□□ -0.43
HLA-DPA1-245ENST00000463066 PLP1P60201 277 aa12.35□□□□□ -0.43
HLA-DPA1-245ENST00000463066 ZNF546Q86UE3 836 aa12.35□□□□□ -0.43
HLA-DPA1-245ENST00000463066 C17orf77Q96MU5 243 aa12.35□□□□□ -0.43
HLA-DPA1-245ENST00000463066 RETNQ9HD89 108 aa12.35□□□□□ -0.43
HLA-DPA1-245ENST00000463066 HIGD1AQ9Y241 93 aa12.35□□□□□ -0.43
HLA-DPA1-245ENST00000463066 HSPB11Q9Y547 144 aa12.35□□□□□ -0.43
HLA-DPA1-245ENST00000463066 HUWE1Q7Z6Z7 4374 aaKnown RBP12.34□□□□□ -0.43
HLA-DPA1-245ENST00000463066 TRAV2A0A0B4J234 112 aa12.34□□□□□ -0.43
HLA-DPA1-245ENST00000463066 H3BRN7 92 aa12.34□□□□□ -0.43
HLA-DPA1-245ENST00000463066 RPL12P30050 165 aaKnown RBP12.34□□□□□ -0.43
HLA-DPA1-245ENST00000463066 ATP6V1FQ16864 119 aa12.34□□□□□ -0.43
HLA-DPA1-245ENST00000463066 OR8I2Q8N0Y5 310 aa12.34□□□□□ -0.43
HLA-DPA1-245ENST00000463066 CHAC2Q8WUX2 184 aa12.34□□□□□ -0.43
HLA-DPA1-245ENST00000463066 SHANK2-AS3Q9BTD1 123 aa12.34□□□□□ -0.43
HLA-DPA1-245ENST00000463066 SLC25A39Q9BZJ4 359 aaPredicted RBP12.34□□□□□ -0.43
HLA-DPA1-245ENST00000463066 GIPP09681 153 aaPredicted RBP12.33□□□□□ -0.44
HLA-DPA1-245ENST00000463066 PET100P0DJ07 73 aa12.33□□□□□ -0.44
HLA-DPA1-245ENST00000463066 RPL35AP18077 110 aaKnown RBP12.33□□□□□ -0.44
HLA-DPA1-245ENST00000463066 NUP62P37198 522 aaPredicted RBP12.33□□□□□ -0.44
HLA-DPA1-245ENST00000463066 PRR20EP86478 221 aa12.33□□□□□ -0.44
HLA-DPA1-245ENST00000463066 PRR20CP86479 221 aa12.33□□□□□ -0.44
HLA-DPA1-245ENST00000463066 PRR20DP86480 221 aa12.33□□□□□ -0.44
HLA-DPA1-245ENST00000463066 PRR20BP86481 221 aa12.33□□□□□ -0.44
HLA-DPA1-245ENST00000463066 PRR20AP86496 221 aa12.33□□□□□ -0.44
HLA-DPA1-245ENST00000463066 OPCMLQ14982 345 aa12.33□□□□□ -0.44
HLA-DPA1-245ENST00000463066 C1orf194Q5T5A4 169 aa12.33□□□□□ -0.44
HLA-DPA1-245ENST00000463066 MORN5Q5VZ52 161 aa12.33□□□□□ -0.44
HLA-DPA1-245ENST00000463066 WFDC1Q9HC57 220 aa12.33□□□□□ -0.44
HLA-DPA1-245ENST00000463066 NRN1Q9NPD7 142 aa12.33□□□□□ -0.44
HLA-DPA1-245ENST00000463066 PFDN2Q9UHV9 154 aa12.33□□□□□ -0.44
HLA-DPA1-245ENST00000463066 DEFB1P60022 68 aa12.32□□□□□ -0.44
HLA-DPA1-245ENST00000463066 RAP2BP61225 183 aa12.32□□□□□ -0.44
HLA-DPA1-245ENST00000463066 TMEM37Q8WXS4 190 aa12.32□□□□□ -0.44
HLA-DPA1-245ENST00000463066 ARV1Q9H2C2 271 aa12.32□□□□□ -0.44
HLA-DPA1-245ENST00000463066 KNCNA6PVL3 124 aa12.31□□□□□ -0.44
HLA-DPA1-245ENST00000463066 G3V3Q6 166 aa12.31□□□□□ -0.44
HLA-DPA1-245ENST00000463066 NHLRC4P0CG21 123 aaPredicted RBP12.31□□□□□ -0.44
HLA-DPA1-245ENST00000463066 AP2S1P53680 142 aaPredicted RBP12.31□□□□□ -0.44
HLA-DPA1-245ENST00000463066 RAB31Q13636 194 aa12.31□□□□□ -0.44
HLA-DPA1-245ENST00000463066 GCSAMLQ5JQS6 135 aa12.31□□□□□ -0.44
HLA-DPA1-245ENST00000463066 PSMG4Q5JS54 123 aa12.31□□□□□ -0.44
HLA-DPA1-245ENST00000463066 FAM110AQ9BQ89 295 aa12.31□□□□□ -0.44
HLA-DPA1-245ENST00000463066 TM2D3Q9BRN9 247 aa12.31□□□□□ -0.44
HLA-DPA1-245ENST00000463066 RSG1Q9BU20 258 aa12.31□□□□□ -0.44
HLA-DPA1-245ENST00000463066 SLC39A9Q9NUM3 307 aa12.31□□□□□ -0.44
HLA-DPA1-245ENST00000463066 FBXL17Q9UF56 701 aa12.31□□□□□ -0.44
HLA-DPA1-245ENST00000463066 RFNGQ9Y644 331 aa12.31□□□□□ -0.44
HLA-DPA1-245ENST00000463066 PXMP4Q9Y6I8 212 aa12.31□□□□□ -0.44
HLA-DPA1-245ENST00000463066 LOC102724200A0A096LPH7 203 aaPredicted RBP12.3□□□□□ -0.44
HLA-DPA1-245ENST00000463066 TRAV5A0A0B4J249 113 aa12.3□□□□□ -0.44
HLA-DPA1-245ENST00000463066 SMLR1H3BR10 107 aa12.3□□□□□ -0.44
HLA-DPA1-245ENST00000463066 SOCS3O14543 225 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms