RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 SEC14L6B5MCN3 397 aa10.93□□□□□ -0.66
COL6A1-202ENST00000463060 MBP02144 154 aa10.93□□□□□ -0.66
COL6A1-202ENST00000463060 OR5G3P0C626 314 aa10.93□□□□□ -0.66
COL6A1-202ENST00000463060 SYNJ2BPP57105 145 aa10.93□□□□□ -0.66
COL6A1-202ENST00000463060 TMEM41BQ5BJD5 291 aa10.93□□□□□ -0.66
COL6A1-202ENST00000463060 SHISA2Q6UWI4 295 aa10.93□□□□□ -0.66
COL6A1-202ENST00000463060 IL34Q6ZMJ4 242 aa10.93□□□□□ -0.66
COL6A1-202ENST00000463060 C3orf56Q8N813 242 aa10.93□□□□□ -0.66
COL6A1-202ENST00000463060 OR10G4Q8NGN3 311 aa10.93□□□□□ -0.66
COL6A1-202ENST00000463060 OR10G9Q8NGN4 311 aa10.93□□□□□ -0.66
COL6A1-202ENST00000463060 OR10G7Q8NGN6 311 aa10.93□□□□□ -0.66
COL6A1-202ENST00000463060 OR1B1Q8NGR6 318 aa10.93□□□□□ -0.66
COL6A1-202ENST00000463060 SEPSECSQ9HD40 501 aaKnown RBP10.93□□□□□ -0.66
COL6A1-202ENST00000463060 TMEM213A2RRL7 107 aa10.92□□□□□ -0.66
COL6A1-202ENST00000463060 C8orf88P0DMB2 117 aa10.92□□□□□ -0.66
COL6A1-202ENST00000463060 FHITP49789 147 aa10.92□□□□□ -0.66
COL6A1-202ENST00000463060 RAB5CP51148 216 aa10.92□□□□□ -0.66
COL6A1-202ENST00000463060 ZNF726P1Q15940 193 aa10.92□□□□□ -0.66
COL6A1-202ENST00000463060 TM4SF20Q53R12 229 aa10.92□□□□□ -0.66
COL6A1-202ENST00000463060 FAM74A1Q5RGS3 127 aa10.92□□□□□ -0.66
COL6A1-202ENST00000463060 AKR1C8PQ5T2L2 129 aa10.92□□□□□ -0.66
COL6A1-202ENST00000463060 MORN5Q5VZ52 161 aa10.92□□□□□ -0.66
COL6A1-202ENST00000463060 C10orf113Q5VZT2 155 aa10.92□□□□□ -0.66
COL6A1-202ENST00000463060 OR1L4Q8NGR5 311 aa10.92□□□□□ -0.66
COL6A1-202ENST00000463060 UHRF2Q96PU4 802 aa10.92□□□□□ -0.66
COL6A1-202ENST00000463060 PFDN5Q99471 154 aa10.92□□□□□ -0.66
COL6A1-202ENST00000463060 PBDC1Q9BVG4 233 aa10.92□□□□□ -0.66
COL6A1-202ENST00000463060 DOK5Q9P104 306 aa10.92□□□□□ -0.66
COL6A1-202ENST00000463060 HIGD1AQ9Y241 93 aa10.92□□□□□ -0.66
COL6A1-202ENST00000463060 ANK2Q01484 3957 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 ZNF320A2RRD8 509 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 H3BRN7 92 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 BUB3O43684 328 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 COX7A2P2O60397 106 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 APOHP02749 345 aaPredicted RBP10.91□□□□□ -0.66
COL6A1-202ENST00000463060 NPPCP23582 126 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 SPATA31B1PQ5VZV4 182 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 DPPA3Q6W0C5 159 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 ADAMTSL5Q6ZMM2 481 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 SSX7Q7RTT5 188 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 LINC00305Q7Z4B0 112 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 FAM167A-AS1Q96KT0 104 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 SHANK2-AS3Q9BTD1 123 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 C20orf24Q9BUV8 137 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 SLC25A39Q9BZJ4 359 aaPredicted RBP10.91□□□□□ -0.66
COL6A1-202ENST00000463060 DAZ1Q9NQZ3 744 aaKnown RBP10.91□□□□□ -0.66
COL6A1-202ENST00000463060 TECRQ9NZ01 308 aaKnown RBP10.91□□□□□ -0.66
COL6A1-202ENST00000463060 RABAC1Q9UI14 185 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 FUT9Q9Y231 359 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 UFC1Q9Y3C8 167 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 VWFP04275 2813 aa10.91□□□□□ -0.66
COL6A1-202ENST00000463060 IGHV7-4-1A0A0J9YVY3 117 aa10.9□□□□□ -0.66
COL6A1-202ENST00000463060 ZNF207O43670 478 aaKnown RBP10.9□□□□□ -0.66
COL6A1-202ENST00000463060 EDN2P20800 178 aa10.9□□□□□ -0.66
COL6A1-202ENST00000463060 FAM78BQ5VT40 261 aa10.9□□□□□ -0.66
COL6A1-202ENST00000463060 MIR17HGQ75NE6 70 aa10.9□□□□□ -0.66
COL6A1-202ENST00000463060 LINC00482Q8N8I6 264 aa10.9□□□□□ -0.66
COL6A1-202ENST00000463060 OR4F17Q8NGA8 305 aa10.9□□□□□ -0.66
COL6A1-202ENST00000463060 OR9G4Q8NGQ1 327 aa10.9□□□□□ -0.66
COL6A1-202ENST00000463060 MBD3L1Q8WWY6 194 aa10.9□□□□□ -0.66
COL6A1-202ENST00000463060 RAB24Q969Q5 203 aa10.9□□□□□ -0.66
COL6A1-202ENST00000463060 OR4F4Q96R69 305 aa10.9□□□□□ -0.66
COL6A1-202ENST00000463060 METTL26Q96S19 204 aa10.9□□□□□ -0.66
COL6A1-202ENST00000463060 RNF2Q99496 336 aa10.9□□□□□ -0.66
COL6A1-202ENST00000463060 MRPL32Q9BYC8 188 aaKnown RBP10.9□□□□□ -0.66
COL6A1-202ENST00000463060 SMPXQ9UHP9 88 aa10.9□□□□□ -0.66
COL6A1-202ENST00000463060 TRAV5A0A0B4J249 113 aa10.89□□□□□ -0.67
COL6A1-202ENST00000463060 C2orf70A6NJV1 201 aa10.89□□□□□ -0.67
COL6A1-202ENST00000463060 ZNF98A6NK75 572 aa10.89□□□□□ -0.67
COL6A1-202ENST00000463060 IFNA7P01567 189 aa10.89□□□□□ -0.67
COL6A1-202ENST00000463060 CSN3P07498 182 aa10.89□□□□□ -0.67
COL6A1-202ENST00000463060 CBLN1P23435 193 aa10.89□□□□□ -0.67
COL6A1-202ENST00000463060 RHOBP62745 196 aa10.89□□□□□ -0.67
COL6A1-202ENST00000463060 FAM122CQ6P4D5 195 aa10.89□□□□□ -0.67
COL6A1-202ENST00000463060 RNF141Q8WVD5 230 aa10.89□□□□□ -0.67
COL6A1-202ENST00000463060 SCRT1Q9BWW7 348 aa10.89□□□□□ -0.67
COL6A1-202ENST00000463060 ACTR3CQ9C0K3 210 aaPredicted RBP10.89□□□□□ -0.67
COL6A1-202ENST00000463060 WNK1Q9H4A3 2382 aa10.89□□□□□ -0.67
COL6A1-202ENST00000463060 CTXND1A0A1B0GTU2 59 aa10.88□□□□□ -0.67
COL6A1-202ENST00000463060 OVOL1O14753 267 aa10.88□□□□□ -0.67
COL6A1-202ENST00000463060 CHEK1O14757 476 aa10.88□□□□□ -0.67
COL6A1-202ENST00000463060 MRPS12O15235 138 aaKnown RBP10.88□□□□□ -0.67
COL6A1-202ENST00000463060 CDC34P49427 236 aaPredicted RBP10.88□□□□□ -0.67
COL6A1-202ENST00000463060 C1orf194Q5T5A4 169 aa10.88□□□□□ -0.67
COL6A1-202ENST00000463060 C16orf54Q6UWD8 224 aa10.88□□□□□ -0.67
COL6A1-202ENST00000463060 ZNF767PQ75MW2 155 aa10.88□□□□□ -0.67
COL6A1-202ENST00000463060 WFDC9Q8NEX5 89 aa10.88□□□□□ -0.67
COL6A1-202ENST00000463060 FAM213BQ8TBF2 198 aa10.88□□□□□ -0.67
COL6A1-202ENST00000463060 SAT2Q96F10 170 aaPredicted RBP10.88□□□□□ -0.67
COL6A1-202ENST00000463060 ZNF503Q96F45 646 aa10.88□□□□□ -0.67
COL6A1-202ENST00000463060 SIGLEC8Q9NYZ4 499 aa10.88□□□□□ -0.67
COL6A1-202ENST00000463060 UBQLN2Q9UHD9 624 aa10.88□□□□□ -0.67
COL6A1-202ENST00000463060 TRAV1-1A0A0B4J248 108 aa10.87□□□□□ -0.67
COL6A1-202ENST00000463060 A0A1W2PPV4 95 aa10.87□□□□□ -0.67
COL6A1-202ENST00000463060 RGS13O14921 159 aa10.87□□□□□ -0.67
COL6A1-202ENST00000463060 EIF3GO75821 320 aaKnown RBP eCLIP10.87□□□□□ -0.67
COL6A1-202ENST00000463060 STAG3L2P0CL84 134 aa10.87□□□□□ -0.67
COL6A1-202ENST00000463060 STAG3L3P0CL85 134 aa10.87□□□□□ -0.67
COL6A1-202ENST00000463060 FOLR2P14207 255 aa10.87□□□□□ -0.67
COL6A1-202ENST00000463060 LEMD1Q68G75 181 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms