RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-222	ENST00000461849	CXCL2	P19875	107 aa		10.39	□□□□□ -0.75
RBM39-222	ENST00000461849	FGF7	P21781	194 aa		10.39	□□□□□ -0.75
RBM39-222	ENST00000461849	CAMLG	P49069	296 aa		10.39	□□□□□ -0.75
RBM39-222	ENST00000461849	ZNF90	Q03938	601 aa		10.39	□□□□□ -0.75
RBM39-222	ENST00000461849	TOMM20L	Q6UXN7	152 aa		10.39	□□□□□ -0.75
RBM39-222	ENST00000461849	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.39	□□□□□ -0.75
RBM39-222	ENST00000461849	BPIFC	Q8NFQ6	507 aa		10.39	□□□□□ -0.75
RBM39-222	ENST00000461849	OR51G1	Q8NGK1	321 aa		10.39	□□□□□ -0.75
RBM39-222	ENST00000461849	MARC2	Q969Z3	335 aa		10.39	□□□□□ -0.75
RBM39-222	ENST00000461849	GINS3	Q9BRX5	216 aa		10.39	□□□□□ -0.75
RBM39-222	ENST00000461849	ZFAND3	Q9H8U3	227 aa		10.39	□□□□□ -0.75
RBM39-222	ENST00000461849	WFDC1	Q9HC57	220 aa		10.39	□□□□□ -0.75
RBM39-222	ENST00000461849	KCNIP2	Q9NS61	270 aa		10.39	□□□□□ -0.75
RBM39-222	ENST00000461849	SLC45A2	Q9UMX9	530 aa		10.39	□□□□□ -0.75
RBM39-222	ENST00000461849	PUS1	Q9Y606	427 aa	Known RBP eCLIP	10.39	□□□□□ -0.75
RBM39-222	ENST00000461849	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.38	□□□□□ -0.75
RBM39-222	ENST00000461849	IGHV3-35	A0A0C4DH35	117 aa		10.38	□□□□□ -0.75
RBM39-222	ENST00000461849	RPL29	P47914	159 aa	Known RBP	10.38	□□□□□ -0.75
RBM39-222	ENST00000461849	PLP1	P60201	277 aa		10.38	□□□□□ -0.75
RBM39-222	ENST00000461849	OPCML	Q14982	345 aa		10.38	□□□□□ -0.75
RBM39-222	ENST00000461849	TM4SF20	Q53R12	229 aa		10.38	□□□□□ -0.75
RBM39-222	ENST00000461849	PXDC1	Q5TGL8	231 aa		10.38	□□□□□ -0.75
RBM39-222	ENST00000461849	UNQ9165/PRO28630	Q6UXU0	137 aa		10.38	□□□□□ -0.75
RBM39-222	ENST00000461849	DEFB125	Q8N687	156 aa		10.38	□□□□□ -0.75
RBM39-222	ENST00000461849	SCGB1C1	Q8TD33	95 aa		10.38	□□□□□ -0.75
RBM39-222	ENST00000461849	ARPC5L	Q9BPX5	153 aa		10.38	□□□□□ -0.75
RBM39-222	ENST00000461849	GGTLC1	Q9BX51	225 aa		10.38	□□□□□ -0.75
RBM39-222	ENST00000461849	NPCDR1	Q9BY65	106 aa		10.38	□□□□□ -0.75
RBM39-222	ENST00000461849	SRD5A3	Q9H8P0	318 aa		10.38	□□□□□ -0.75
RBM39-222	ENST00000461849	DAZ1	Q9NQZ3	744 aa	Known RBP	10.38	□□□□□ -0.75
RBM39-222	ENST00000461849	MRPL27	Q9P0M9	148 aa	Known RBP	10.38	□□□□□ -0.75
RBM39-222	ENST00000461849	SELENOK	Q9Y6D0	94 aa		10.38	□□□□□ -0.75
RBM39-222	ENST00000461849	C17orf112	F2Z3M2	114 aa		10.37	□□□□□ -0.75
RBM39-222	ENST00000461849	JTB	O76095	146 aa		10.37	□□□□□ -0.75
RBM39-222	ENST00000461849	YIF1A	O95070	293 aa		10.37	□□□□□ -0.75
RBM39-222	ENST00000461849	IL4	P05112	153 aa		10.37	□□□□□ -0.75
RBM39-222	ENST00000461849	EIF2B2	P49770	351 aa	Known RBP	10.37	□□□□□ -0.75
RBM39-222	ENST00000461849	PRR20E	P86478	221 aa		10.37	□□□□□ -0.75
RBM39-222	ENST00000461849	PRR20C	P86479	221 aa		10.37	□□□□□ -0.75
RBM39-222	ENST00000461849	PRR20D	P86480	221 aa		10.37	□□□□□ -0.75
RBM39-222	ENST00000461849	PRR20B	P86481	221 aa		10.37	□□□□□ -0.75
RBM39-222	ENST00000461849	PRR20A	P86496	221 aa		10.37	□□□□□ -0.75
RBM39-222	ENST00000461849	TMEM61	Q8N0U2	210 aa		10.37	□□□□□ -0.75
RBM39-222	ENST00000461849	MLX	Q9UH92	298 aa		10.37	□□□□□ -0.75
RBM39-222	ENST00000461849	KANTR	A0A1W2PQU2	76 aa		10.36	□□□□□ -0.75
RBM39-222	ENST00000461849	BCL2L11	O43521	198 aa		10.36	□□□□□ -0.75
RBM39-222	ENST00000461849	LGALSL	Q3ZCW2	172 aa	Predicted RBP	10.36	□□□□□ -0.75
RBM39-222	ENST00000461849	TMUB2	Q71RG4	321 aa		10.36	□□□□□ -0.75
RBM39-222	ENST00000461849	ZNF709	Q8N972	641 aa		10.36	□□□□□ -0.75
RBM39-222	ENST00000461849	RNF125	Q96EQ8	232 aa		10.36	□□□□□ -0.75
RBM39-222	ENST00000461849	C20orf24	Q9BUV8	137 aa		10.36	□□□□□ -0.75
RBM39-222	ENST00000461849	ARL6	Q9H0F7	186 aa		10.36	□□□□□ -0.75
RBM39-222	ENST00000461849	CYTL1	Q9NRR1	136 aa		10.36	□□□□□ -0.75
RBM39-222	ENST00000461849	TIMM9	Q9Y5J7	89 aa		10.36	□□□□□ -0.75
RBM39-222	ENST00000461849	TRAV25	A0A0B4J276	109 aa		10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	LINC00869	P0C866	280 aa		10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	C8orf88	P0DMB2	117 aa		10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	CRYBB3	P26998	211 aa		10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	S100A7	P31151	101 aa		10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	USF2	Q15853	346 aa	Predicted RBP	10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	RPL7L1	Q6DKI1	246 aa	Known RBP	10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	LAMTOR1	Q6IAA8	161 aa		10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	TMEM182	Q6ZP80	229 aa	Predicted RBP	10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	C9orf62	Q8N4C0	152 aa		10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	STPG3	Q8N7X2	389 aa		10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	GNPNAT1	Q96EK6	184 aa	Predicted RBP	10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	METTL26	Q96S19	204 aa		10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	WFDC10A	Q9H1F0	79 aa		10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	ARV1	Q9H2C2	271 aa		10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	EDA2R	Q9HAV5	297 aa		10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	SLC39A9	Q9NUM3	307 aa		10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	PFDN2	Q9UHV9	154 aa		10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	PXMP4	Q9Y6I8	212 aa		10.35	□□□□□ -0.75
RBM39-222	ENST00000461849	C4BPB	P20851	252 aa		10.34	□□□□□ -0.75
RBM39-222	ENST00000461849	NPPC	P23582	126 aa		10.34	□□□□□ -0.75
RBM39-222	ENST00000461849	GATA2	P23769	480 aa	Predicted RBP	10.34	□□□□□ -0.75
RBM39-222	ENST00000461849	BMI1	P35226	326 aa		10.34	□□□□□ -0.75
RBM39-222	ENST00000461849	LYZ	P61626	148 aa		10.34	□□□□□ -0.75
RBM39-222	ENST00000461849	B2M	P61769	119 aa		10.34	□□□□□ -0.75
RBM39-222	ENST00000461849	EIF5A	P63241	154 aa	Known RBP	10.34	□□□□□ -0.75
RBM39-222	ENST00000461849	ZFAND6	Q6FIF0	208 aa		10.34	□□□□□ -0.75
RBM39-222	ENST00000461849	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.34	□□□□□ -0.75
RBM39-222	ENST00000461849		Q6ZRG5	221 aa		10.34	□□□□□ -0.75
RBM39-222	ENST00000461849	S100A7A	Q86SG5	101 aa		10.34	□□□□□ -0.75
RBM39-222	ENST00000461849	PSMG3	Q9BT73	122 aa	Predicted RBP	10.34	□□□□□ -0.75
RBM39-222	ENST00000461849	RABAC1	Q9UI14	185 aa		10.34	□□□□□ -0.75
RBM39-222	ENST00000461849		U3KQE9	123 aa		10.34	□□□□□ -0.75
RBM39-222	ENST00000461849	STARD9	Q9P2P6	4700 aa		10.33	□□□□□ -0.76
RBM39-222	ENST00000461849	ELOA3C	A0A087WX78	387 aa	Predicted RBP	10.33	□□□□□ -0.76
RBM39-222	ENST00000461849	IGHV7-4-1	A0A0J9YVY3	117 aa		10.33	□□□□□ -0.76
RBM39-222	ENST00000461849		A0A1W2PS18	150 aa		10.33	□□□□□ -0.76
RBM39-222	ENST00000461849	RBMY1B	A6NDE4	496 aa	Known RBP	10.33	□□□□□ -0.76
RBM39-222	ENST00000461849	RBMY1E	A6NEQ0	496 aa	Known RBP	10.33	□□□□□ -0.76
RBM39-222	ENST00000461849	HYPM	O75409	117 aa		10.33	□□□□□ -0.76
RBM39-222	ENST00000461849	HNRNPC	P07910	306 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
RBM39-222	ENST00000461849	RBMY1D	P0C7P1	496 aa	Known RBP	10.33	□□□□□ -0.76
RBM39-222	ENST00000461849	MIC13	Q5XKP0	118 aa		10.33	□□□□□ -0.76
RBM39-222	ENST00000461849	HSD17B11	Q8NBQ5	300 aa		10.33	□□□□□ -0.76
RBM39-222	ENST00000461849	OR2G3	Q8NGZ4	309 aa		10.33	□□□□□ -0.76
RBM39-222	ENST00000461849	PPP1R14B	Q96C90	147 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms