RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 SOSTQ9BQB4 213 aa10.48□□□□□ -0.73
SMPD4-216ENST00000461187 SLC35B3Q9H1N7 401 aa10.48□□□□□ -0.73
SMPD4-216ENST00000461187 DKK2Q9UBU2 259 aa10.48□□□□□ -0.73
SMPD4-216ENST00000461187 RSL24D1Q9UHA3 163 aaKnown RBP10.48□□□□□ -0.73
SMPD4-216ENST00000461187 RFNGQ9Y644 331 aa10.48□□□□□ -0.73
SMPD4-216ENST00000461187 F6UB75 175 aa10.47□□□□□ -0.73
SMPD4-216ENST00000461187 M0R2N4 97 aa10.47□□□□□ -0.73
SMPD4-216ENST00000461187 ISLRO14498 428 aa10.47□□□□□ -0.73
SMPD4-216ENST00000461187 FABP1P07148 127 aa10.47□□□□□ -0.73
SMPD4-216ENST00000461187 ANXA3P12429 323 aa10.47□□□□□ -0.73
SMPD4-216ENST00000461187 PAX9P55771 341 aa10.47□□□□□ -0.73
SMPD4-216ENST00000461187 OR2F1Q13607 317 aa10.47□□□□□ -0.73
SMPD4-216ENST00000461187 FAM222AQ5U5X8 452 aa10.47□□□□□ -0.73
SMPD4-216ENST00000461187 SPATA31B1PQ5VZV4 182 aa10.47□□□□□ -0.73
SMPD4-216ENST00000461187 COQ8AQ8NI60 647 aa10.47□□□□□ -0.73
SMPD4-216ENST00000461187 RAB2BQ8WUD1 216 aa10.47□□□□□ -0.73
SMPD4-216ENST00000461187 NIPSNAP3BQ9BS92 247 aa10.47□□□□□ -0.73
SMPD4-216ENST00000461187 DUXBA0A1W2PPF3 345 aa10.46□□□□□ -0.73
SMPD4-216ENST00000461187 PRSS29PA6NIE9 313 aa10.46□□□□□ -0.73
SMPD4-216ENST00000461187 IAPPP10997 89 aa10.46□□□□□ -0.73
SMPD4-216ENST00000461187 TNFSF8P32971 234 aa10.46□□□□□ -0.73
SMPD4-216ENST00000461187 PSG9Q00887 426 aa10.46□□□□□ -0.73
SMPD4-216ENST00000461187 LGALS9BQ3B8N2 356 aa10.46□□□□□ -0.73
SMPD4-216ENST00000461187 FAM78BQ5VT40 261 aa10.46□□□□□ -0.73
SMPD4-216ENST00000461187 OR8I2Q8N0Y5 310 aa10.46□□□□□ -0.73
SMPD4-216ENST00000461187 C1orf158Q8N1D5 194 aa10.46□□□□□ -0.73
SMPD4-216ENST00000461187 THAP8Q8NA92 274 aa10.46□□□□□ -0.73
SMPD4-216ENST00000461187 PPP1R14BQ96C90 147 aa10.46□□□□□ -0.73
SMPD4-216ENST00000461187 FAM210BQ96KR6 192 aa10.46□□□□□ -0.73
SMPD4-216ENST00000461187 PLA2G2EQ9NZK7 142 aa10.46□□□□□ -0.73
SMPD4-216ENST00000461187 A0A0J9YX75 114 aa10.45□□□□□ -0.74
SMPD4-216ENST00000461187 TEX48A0A1B0GUV7 120 aa10.45□□□□□ -0.74
SMPD4-216ENST00000461187 TMBIM6P55061 237 aa10.45□□□□□ -0.74
SMPD4-216ENST00000461187 RAB11AP62491 216 aa10.45□□□□□ -0.74
SMPD4-216ENST00000461187 EBLN2Q6P2I7 272 aa10.45□□□□□ -0.74
SMPD4-216ENST00000461187 C20orf173Q96LM9 149 aa10.45□□□□□ -0.74
SMPD4-216ENST00000461187 C17orf77Q96MU5 243 aa10.45□□□□□ -0.74
SMPD4-216ENST00000461187 BCL7BQ9BQE9 202 aa10.45□□□□□ -0.74
SMPD4-216ENST00000461187 SLIRPQ9GZT3 109 aaKnown RBP10.45□□□□□ -0.74
SMPD4-216ENST00000461187 GOLT1BQ9Y3E0 138 aa10.45□□□□□ -0.74
SMPD4-216ENST00000461187 DYNC1H1Q14204 4646 aaKnown RBP10.45□□□□□ -0.74
SMPD4-216ENST00000461187 PIGBOS1A0A0B4J2F0 54 aa10.44□□□□□ -0.74
SMPD4-216ENST00000461187 FABP12A6NFH5 140 aa10.44□□□□□ -0.74
SMPD4-216ENST00000461187 A8MTW9 85 aa10.44□□□□□ -0.74
SMPD4-216ENST00000461187 PRSS46E5RG02 174 aa10.44□□□□□ -0.74
SMPD4-216ENST00000461187 SLC25A6P12236 298 aa10.44□□□□□ -0.74
SMPD4-216ENST00000461187 OXA1LQ15070 435 aa10.44□□□□□ -0.74
SMPD4-216ENST00000461187 TMEM128Q5BJH2 165 aa10.44□□□□□ -0.74
SMPD4-216ENST00000461187 SAMD13Q5VXD3 122 aa10.44□□□□□ -0.74
SMPD4-216ENST00000461187 Q6ZR54 194 aa10.44□□□□□ -0.74
SMPD4-216ENST00000461187 TMED4Q7Z7H5 227 aa10.44□□□□□ -0.74
SMPD4-216ENST00000461187 LRTM2Q8N967 370 aa10.44□□□□□ -0.74
SMPD4-216ENST00000461187 SLC25A32Q9H2D1 315 aa10.44□□□□□ -0.74
SMPD4-216ENST00000461187 RPRMQ9NS64 109 aa10.44□□□□□ -0.74
SMPD4-216ENST00000461187 LOC102723971A0A1B0GUV8 181 aa10.43□□□□□ -0.74
SMPD4-216ENST00000461187 CFDP00746 253 aaPredicted RBP10.43□□□□□ -0.74
SMPD4-216ENST00000461187 IFNA21P01568 189 aa10.43□□□□□ -0.74
SMPD4-216ENST00000461187 HBE1P02100 147 aa10.43□□□□□ -0.74
SMPD4-216ENST00000461187 MEOX2P50222 304 aa10.43□□□□□ -0.74
SMPD4-216ENST00000461187 GGNBP1Q5YKI7 109 aa10.43□□□□□ -0.74
SMPD4-216ENST00000461187 AMTNQ6UX39 209 aa10.43□□□□□ -0.74
SMPD4-216ENST00000461187 UBE2DNLQ8IWF7 75 aa10.43□□□□□ -0.74
SMPD4-216ENST00000461187 TRIM63Q969Q1 353 aa10.43□□□□□ -0.74
SMPD4-216ENST00000461187 C16orf92Q96LL3 132 aa10.43□□□□□ -0.74
SMPD4-216ENST00000461187 C7orf50Q9BRJ6 194 aaKnown RBP10.43□□□□□ -0.74
SMPD4-216ENST00000461187 PAIP2BQ9ULR5 123 aaKnown RBP10.43□□□□□ -0.74
SMPD4-216ENST00000461187 YTHDF2Q9Y5A9 579 aaKnown RBP10.43□□□□□ -0.74
SMPD4-216ENST00000461187 DNAH11Q96DT5 4516 aa10.43□□□□□ -0.74
SMPD4-216ENST00000461187 IGLV2-18A0A075B6J9 118 aa10.42□□□□□ -0.74
SMPD4-216ENST00000461187 ZNF98A6NK75 572 aa10.42□□□□□ -0.74
SMPD4-216ENST00000461187 MED6O75586 246 aa10.42□□□□□ -0.74
SMPD4-216ENST00000461187 MED14OSP0DP75 135 aa10.42□□□□□ -0.74
SMPD4-216ENST00000461187 HTN3P15516 51 aa10.42□□□□□ -0.74
SMPD4-216ENST00000461187 FAUP35544 74 aaKnown RBP10.42□□□□□ -0.74
SMPD4-216ENST00000461187 GALR1P47211 349 aa10.42□□□□□ -0.74
SMPD4-216ENST00000461187 RRN3P1Q2M238 152 aa10.42□□□□□ -0.74
SMPD4-216ENST00000461187 TMEM182Q6ZP80 229 aaPredicted RBP10.42□□□□□ -0.74
SMPD4-216ENST00000461187 RSG1Q9BU20 258 aa10.42□□□□□ -0.74
SMPD4-216ENST00000461187 MAGT1Q9H0U3 335 aa10.42□□□□□ -0.74
SMPD4-216ENST00000461187 SLC25A22Q9H936 323 aa10.42□□□□□ -0.74
SMPD4-216ENST00000461187 DOK5Q9P104 306 aa10.42□□□□□ -0.74
SMPD4-216ENST00000461187 SLC45A2Q9UMX9 530 aa10.42□□□□□ -0.74
SMPD4-216ENST00000461187 RYR1P21817 5038 aa10.42□□□□□ -0.74
SMPD4-216ENST00000461187 H3BMQ9 156 aa10.41□□□□□ -0.74
SMPD4-216ENST00000461187 SYNGR2O43760 224 aa10.41□□□□□ -0.74
SMPD4-216ENST00000461187 VAMP1P23763 118 aa10.41□□□□□ -0.74
SMPD4-216ENST00000461187 GATA2P23769 480 aaPredicted RBP10.41□□□□□ -0.74
SMPD4-216ENST00000461187 RNF212Q495C1 297 aa10.41□□□□□ -0.74
SMPD4-216ENST00000461187 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.41□□□□□ -0.74
SMPD4-216ENST00000461187 OR4D5Q8NGN0 318 aa10.41□□□□□ -0.74
SMPD4-216ENST00000461187 MCFD2Q8NI22 146 aa10.41□□□□□ -0.74
SMPD4-216ENST00000461187 IGF2BP2-AS1Q96M15 143 aa10.41□□□□□ -0.74
SMPD4-216ENST00000461187 CIB3Q96Q77 187 aaPredicted RBP10.41□□□□□ -0.74
SMPD4-216ENST00000461187 TMED3Q9Y3Q3 217 aa10.41□□□□□ -0.74
SMPD4-216ENST00000461187 WRBO00258 174 aa10.4□□□□□ -0.74
SMPD4-216ENST00000461187 SFT2D2O95562 160 aa10.4□□□□□ -0.74
SMPD4-216ENST00000461187 DAD1P61803 113 aa10.4□□□□□ -0.74
SMPD4-216ENST00000461187 RPP30P78346 268 aaKnown RBP10.4□□□□□ -0.74
SMPD4-216ENST00000461187 TMEM88Q6PEY1 159 aa10.4□□□□□ -0.74
SMPD4-216ENST00000461187 TOMM5Q8N4H5 51 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms