RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 DTD1Q8TEA8 209 aa8.72□□□□□ -1.01
GPNMB-204ENST00000459927 C7orf50Q9BRJ6 194 aaKnown RBP8.72□□□□□ -1.01
GPNMB-204ENST00000459927 PRR13Q9NZ81 148 aa8.72□□□□□ -1.01
GPNMB-204ENST00000459927 NACAE9PAV3 2078 aa8.72□□□□□ -1.01
GPNMB-204ENST00000459927 LOC102723971A0A1B0GUV8 181 aa8.71□□□□□ -1.02
GPNMB-204ENST00000459927 ISLRO14498 428 aa8.71□□□□□ -1.02
GPNMB-204ENST00000459927 AKAIN1P0CW23 69 aa8.71□□□□□ -1.02
GPNMB-204ENST00000459927 MRPS10P82664 201 aaKnown RBP8.71□□□□□ -1.02
GPNMB-204ENST00000459927 SMCO1Q147U7 214 aa8.71□□□□□ -1.02
GPNMB-204ENST00000459927 TMEM88Q6PEY1 159 aa8.71□□□□□ -1.02
GPNMB-204ENST00000459927 LYZL2Q7Z4W2 148 aa8.71□□□□□ -1.02
GPNMB-204ENST00000459927 OR8I2Q8N0Y5 310 aa8.71□□□□□ -1.02
GPNMB-204ENST00000459927 OR51S1Q8NGJ8 323 aa8.71□□□□□ -1.02
GPNMB-204ENST00000459927 OR4C16Q8NGL9 310 aa8.71□□□□□ -1.02
GPNMB-204ENST00000459927 COQ8AQ8NI60 647 aa8.71□□□□□ -1.02
GPNMB-204ENST00000459927 C17orf77Q96MU5 243 aa8.71□□□□□ -1.02
GPNMB-204ENST00000459927 MAGT1Q9H0U3 335 aa8.71□□□□□ -1.02
GPNMB-204ENST00000459927 A0A0B4J2A0 478 aa8.7□□□□□ -1.02
GPNMB-204ENST00000459927 PRM2P04554 102 aa8.7□□□□□ -1.02
GPNMB-204ENST00000459927 FABP1P07148 127 aa8.7□□□□□ -1.02
GPNMB-204ENST00000459927 FAM3BP58499 235 aaPredicted RBP8.7□□□□□ -1.02
GPNMB-204ENST00000459927 DAD1P61803 113 aa8.7□□□□□ -1.02
GPNMB-204ENST00000459927 OR2F1Q13607 317 aa8.7□□□□□ -1.02
GPNMB-204ENST00000459927 C20orf173Q96LM9 149 aa8.7□□□□□ -1.02
GPNMB-204ENST00000459927 TRGV9Q99603 122 aa8.7□□□□□ -1.02
GPNMB-204ENST00000459927 PRRT1Q99946 306 aa8.7□□□□□ -1.02
GPNMB-204ENST00000459927 RSG1Q9BU20 258 aa8.7□□□□□ -1.02
GPNMB-204ENST00000459927 RPRMQ9NS64 109 aa8.7□□□□□ -1.02
GPNMB-204ENST00000459927 SHPKQ9UHJ6 478 aa8.7□□□□□ -1.02
GPNMB-204ENST00000459927 A8MTW9 85 aa8.69□□□□□ -1.02
GPNMB-204ENST00000459927 CTDSPLO15194 276 aa8.69□□□□□ -1.02
GPNMB-204ENST00000459927 RGS5O15539 181 aa8.69□□□□□ -1.02
GPNMB-204ENST00000459927 AKR1C4P17516 323 aa8.69□□□□□ -1.02
GPNMB-204ENST00000459927 LYZP61626 148 aa8.69□□□□□ -1.02
GPNMB-204ENST00000459927 AMTNQ6UX39 209 aa8.69□□□□□ -1.02
GPNMB-204ENST00000459927 CLVS1Q8IUQ0 354 aaPredicted RBP8.69□□□□□ -1.02
GPNMB-204ENST00000459927 SMIM4Q8WVI0 70 aa8.69□□□□□ -1.02
GPNMB-204ENST00000459927 PPP1R14BQ96C90 147 aa8.69□□□□□ -1.02
GPNMB-204ENST00000459927 SLC35E1Q96K37 410 aa8.69□□□□□ -1.02
GPNMB-204ENST00000459927 C16orf92Q96LL3 132 aa8.69□□□□□ -1.02
GPNMB-204ENST00000459927 IGF2BP2-AS1Q96M15 143 aa8.69□□□□□ -1.02
GPNMB-204ENST00000459927 SCGB3A2Q96PL1 93 aa8.69□□□□□ -1.02
GPNMB-204ENST00000459927 DOK5Q9P104 306 aa8.69□□□□□ -1.02
GPNMB-204ENST00000459927 TMED3Q9Y3Q3 217 aa8.69□□□□□ -1.02
GPNMB-204ENST00000459927 HSPG2P98160 4391 aa8.68□□□□□ -1.02
GPNMB-204ENST00000459927 IGKV1OR2-108A0A075B7D4 117 aa8.68□□□□□ -1.02
GPNMB-204ENST00000459927 ZNF705GA8MUZ8 300 aaPredicted RBP8.68□□□□□ -1.02
GPNMB-204ENST00000459927 PITX3O75364 302 aa8.68□□□□□ -1.02
GPNMB-204ENST00000459927 TNP2Q05952 138 aa8.68□□□□□ -1.02
GPNMB-204ENST00000459927 SAMD13Q5VXD3 122 aa8.68□□□□□ -1.02
GPNMB-204ENST00000459927 GGNBP1Q5YKI7 109 aa8.68□□□□□ -1.02
GPNMB-204ENST00000459927 C15orf53Q8NAA6 179 aa8.68□□□□□ -1.02
GPNMB-204ENST00000459927 ANKRD20A5PA0PJZ0 165 aa8.67□□□□□ -1.02
GPNMB-204ENST00000459927 ZNF98A6NK75 572 aa8.67□□□□□ -1.02
GPNMB-204ENST00000459927 CRXO43186 299 aaPredicted RBP8.67□□□□□ -1.02
GPNMB-204ENST00000459927 CFDP00746 253 aaPredicted RBP8.67□□□□□ -1.02
GPNMB-204ENST00000459927 MEOX2P50222 304 aa8.67□□□□□ -1.02
GPNMB-204ENST00000459927 RAB11AP62491 216 aa8.67□□□□□ -1.02
GPNMB-204ENST00000459927 TMEM182Q6ZP80 229 aaPredicted RBP8.67□□□□□ -1.02
GPNMB-204ENST00000459927 THAP8Q8NA92 274 aa8.67□□□□□ -1.02
GPNMB-204ENST00000459927 OR4D5Q8NGN0 318 aa8.67□□□□□ -1.02
GPNMB-204ENST00000459927 OR1S1Q8NH92 325 aa8.67□□□□□ -1.02
GPNMB-204ENST00000459927 DIRAS2Q96HU8 199 aa8.67□□□□□ -1.02
GPNMB-204ENST00000459927 TMEM208Q9BTX3 173 aa8.67□□□□□ -1.02
GPNMB-204ENST00000459927 RABL2AQ9UBK7 228 aaPredicted RBP8.67□□□□□ -1.02
GPNMB-204ENST00000459927 SCP2D1Q9UJQ7 156 aa8.67□□□□□ -1.02
GPNMB-204ENST00000459927 RABL2BQ9UNT1 228 aa8.67□□□□□ -1.02
GPNMB-204ENST00000459927 LRP1BQ9NZR2 4599 aa8.67□□□□□ -1.02
GPNMB-204ENST00000459927 LYRM9A8MSI8 78 aa8.66□□□□□ -1.02
GPNMB-204ENST00000459927 DUSP14O95147 198 aaKnown RBP8.66□□□□□ -1.02
GPNMB-204ENST00000459927 AZU1P20160 251 aa8.66□□□□□ -1.02
GPNMB-204ENST00000459927 GALR1P47211 349 aa8.66□□□□□ -1.02
GPNMB-204ENST00000459927 B2MP61769 119 aa8.66□□□□□ -1.02
GPNMB-204ENST00000459927 IL18Q14116 193 aa8.66□□□□□ -1.02
GPNMB-204ENST00000459927 FCN2Q15485 313 aa8.66□□□□□ -1.02
GPNMB-204ENST00000459927 IGFL4Q6B9Z1 124 aa8.66□□□□□ -1.02
GPNMB-204ENST00000459927 ZNRF2Q8NHG8 242 aa8.66□□□□□ -1.02
GPNMB-204ENST00000459927 ATG101Q9BSB4 218 aa8.66□□□□□ -1.02
GPNMB-204ENST00000459927 SLC25A32Q9H2D1 315 aa8.66□□□□□ -1.02
GPNMB-204ENST00000459927 SLC45A2Q9UMX9 530 aa8.66□□□□□ -1.02
GPNMB-204ENST00000459927 NBDYA0A0U1RRE5 68 aa8.65□□□□□ -1.02
GPNMB-204ENST00000459927 C16orf90A8MZG2 172 aa8.65□□□□□ -1.02
GPNMB-204ENST00000459927 CDK2AP2O75956 126 aa8.65□□□□□ -1.02
GPNMB-204ENST00000459927 DEFB130BP0DP73 79 aa8.65□□□□□ -1.02
GPNMB-204ENST00000459927 DEFB130AP0DP74 79 aa8.65□□□□□ -1.02
GPNMB-204ENST00000459927 ANXA3P12429 323 aa8.65□□□□□ -1.02
GPNMB-204ENST00000459927 GATA2P23769 480 aaPredicted RBP8.65□□□□□ -1.02
GPNMB-204ENST00000459927 ALDH3B2P48448 385 aa8.65□□□□□ -1.02
GPNMB-204ENST00000459927 CNN1P51911 297 aaKnown RBP8.65□□□□□ -1.02
GPNMB-204ENST00000459927 SPCS2Q15005 226 aa8.65□□□□□ -1.02
GPNMB-204ENST00000459927 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.65□□□□□ -1.02
GPNMB-204ENST00000459927 GPR141Q7Z602 305 aa8.65□□□□□ -1.02
GPNMB-204ENST00000459927 OR11H7Q8NGC8 314 aa8.65□□□□□ -1.02
GPNMB-204ENST00000459927 OR1B1Q8NGR6 318 aa8.65□□□□□ -1.02
GPNMB-204ENST00000459927 SLC25A22Q9H936 323 aa8.65□□□□□ -1.02
GPNMB-204ENST00000459927 TRAV8-2A0A0B4J237 113 aa8.64□□□□□ -1.03
GPNMB-204ENST00000459927 PLAC8L1A1L4L8 177 aa8.64□□□□□ -1.03
GPNMB-204ENST00000459927 CBY3A6NI87 242 aa8.64□□□□□ -1.03
GPNMB-204ENST00000459927 F5H768 121 aa8.64□□□□□ -1.03
GPNMB-204ENST00000459927 M0R2Z0 102 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms