RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 BUB3O43684 328 aa9.59□□□□□ -0.87
COL18A1-206ENST00000459895 ORM2P19652 201 aa9.59□□□□□ -0.87
COL18A1-206ENST00000459895 NUP62P37198 522 aaPredicted RBP9.59□□□□□ -0.87
COL18A1-206ENST00000459895 TFPI2P48307 235 aa9.59□□□□□ -0.87
COL18A1-206ENST00000459895 CAMLGP49069 296 aa9.59□□□□□ -0.87
COL18A1-206ENST00000459895 SELENOTP62341 195 aa9.59□□□□□ -0.87
COL18A1-206ENST00000459895 ODF3L2Q3SX64 289 aa9.59□□□□□ -0.87
COL18A1-206ENST00000459895 LAMTOR1Q6IAA8 161 aa9.59□□□□□ -0.87
COL18A1-206ENST00000459895 GBGT1Q8N5D6 347 aa9.59□□□□□ -0.87
COL18A1-206ENST00000459895 GRAMD2BQ96HH9 432 aa9.59□□□□□ -0.87
COL18A1-206ENST00000459895 UHRF2Q96PU4 802 aa9.59□□□□□ -0.87
COL18A1-206ENST00000459895 NPCDR1Q9BY65 106 aa9.59□□□□□ -0.87
COL18A1-206ENST00000459895 UBQLN2Q9UHD9 624 aa9.59□□□□□ -0.87
COL18A1-206ENST00000459895 SLC45A2Q9UMX9 530 aa9.59□□□□□ -0.87
COL18A1-206ENST00000459895 SORL1Q92673 2214 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 RNF222A6NCQ9 220 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 OR4C46A6NHA9 309 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 CFDP00746 253 aaPredicted RBP9.58□□□□□ -0.88
COL18A1-206ENST00000459895 IGHV4-30-4P0DP06 118 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 PRR20EP86478 221 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 PRR20CP86479 221 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 PRR20DP86480 221 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 PRR20BP86481 221 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 PRR20AP86496 221 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 FGL1Q08830 312 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 ATP6V1FQ16864 119 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 MIC13Q5XKP0 118 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 SIGLEC15Q6ZMC9 328 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 Q6ZNX1 250 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 FAM24BQ8N5W8 94 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 STXBP6Q8NFX7 210 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 PPP1R14BQ96C90 147 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 AQP10Q96PS8 301 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 ARL6Q9H0F7 186 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 SLC25A32Q9H2D1 315 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 MS4A6AQ9H2W1 248 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 C19orf73Q9NVV2 129 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 FBXL17Q9UF56 701 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 SMAD5-AS1Q9Y6J3 95 aa9.58□□□□□ -0.88
COL18A1-206ENST00000459895 DNAH9Q9NYC9 4486 aa9.57□□□□□ -0.88
COL18A1-206ENST00000459895 hCG_2014768A0A024R1R8 64 aa9.57□□□□□ -0.88
COL18A1-206ENST00000459895 PLP1P60201 277 aa9.57□□□□□ -0.88
COL18A1-206ENST00000459895 RPL11P62913 178 aaKnown RBP9.57□□□□□ -0.88
COL18A1-206ENST00000459895 LEMD1Q68G75 181 aa9.57□□□□□ -0.88
COL18A1-206ENST00000459895 WDR61Q9GZS3 305 aaKnown RBP9.57□□□□□ -0.88
COL18A1-206ENST00000459895 SLC25A22Q9H936 323 aa9.57□□□□□ -0.88
COL18A1-206ENST00000459895 MAP6D1Q9H9H5 199 aa9.57□□□□□ -0.88
COL18A1-206ENST00000459895 WFDC1Q9HC57 220 aa9.57□□□□□ -0.88
COL18A1-206ENST00000459895 HIGD1AQ9Y241 93 aa9.57□□□□□ -0.88
COL18A1-206ENST00000459895 PXMP4Q9Y6I8 212 aa9.57□□□□□ -0.88
COL18A1-206ENST00000459895 HELTA6NFD8 242 aa9.56□□□□□ -0.88
COL18A1-206ENST00000459895 COX7A2P2O60397 106 aa9.56□□□□□ -0.88
COL18A1-206ENST00000459895 MPDU1O75352 247 aa9.56□□□□□ -0.88
COL18A1-206ENST00000459895 OR5G3P0C626 314 aa9.56□□□□□ -0.88
COL18A1-206ENST00000459895 FRMD6-AS1P0C7T7 363 aa9.56□□□□□ -0.88
COL18A1-206ENST00000459895 B2MP61769 119 aa9.56□□□□□ -0.88
COL18A1-206ENST00000459895 PATE2Q6UY27 113 aa9.56□□□□□ -0.88
COL18A1-206ENST00000459895 DEFB125Q8N687 156 aa9.56□□□□□ -0.88
COL18A1-206ENST00000459895 DCANP1Q8TF63 244 aa9.56□□□□□ -0.88
COL18A1-206ENST00000459895 SHANK2-AS3Q9BTD1 123 aa9.56□□□□□ -0.88
COL18A1-206ENST00000459895 RSG1Q9BU20 258 aa9.56□□□□□ -0.88
COL18A1-206ENST00000459895 SLC25A39Q9BZJ4 359 aaPredicted RBP9.56□□□□□ -0.88
COL18A1-206ENST00000459895 ARV1Q9H2C2 271 aa9.56□□□□□ -0.88
COL18A1-206ENST00000459895 SRD5A3Q9H8P0 318 aa9.56□□□□□ -0.88
COL18A1-206ENST00000459895 TNFSF18Q9UNG2 199 aa9.56□□□□□ -0.88
COL18A1-206ENST00000459895 TRAV2A0A0B4J234 112 aa9.55□□□□□ -0.88
COL18A1-206ENST00000459895 ZNF98A6NK75 572 aa9.55□□□□□ -0.88
COL18A1-206ENST00000459895 K7EQG2 157 aa9.55□□□□□ -0.88
COL18A1-206ENST00000459895 HYPMO75409 117 aa9.55□□□□□ -0.88
COL18A1-206ENST00000459895 CD5P06127 495 aa9.55□□□□□ -0.88
COL18A1-206ENST00000459895 RAB31Q13636 194 aa9.55□□□□□ -0.88
COL18A1-206ENST00000459895 ZNF124Q15973 351 aa9.55□□□□□ -0.88
COL18A1-206ENST00000459895 DEFB121Q5J5C9 76 aa9.55□□□□□ -0.88
COL18A1-206ENST00000459895 MORN5Q5VZ52 161 aa9.55□□□□□ -0.88
COL18A1-206ENST00000459895 WFDC3Q8IUB2 231 aa9.55□□□□□ -0.88
COL18A1-206ENST00000459895 CITED4Q96RK1 184 aa9.55□□□□□ -0.88
COL18A1-206ENST00000459895 NRN1Q9NPD7 142 aa9.55□□□□□ -0.88
COL18A1-206ENST00000459895 SLC39A9Q9NUM3 307 aa9.55□□□□□ -0.88
COL18A1-206ENST00000459895 COL7A1Q02388 2944 aa9.54□□□□□ -0.88
COL18A1-206ENST00000459895 OR11H12B2RN74 326 aa9.54□□□□□ -0.88
COL18A1-206ENST00000459895 ARPC5O15511 151 aa9.54□□□□□ -0.88
COL18A1-206ENST00000459895 ZNF688P0C7X2 276 aa9.54□□□□□ -0.88
COL18A1-206ENST00000459895 RPL29P47914 159 aaKnown RBP9.54□□□□□ -0.88
COL18A1-206ENST00000459895 GCSAMLQ5JQS6 135 aa9.54□□□□□ -0.88
COL18A1-206ENST00000459895 C1orf194Q5T5A4 169 aa9.54□□□□□ -0.88
COL18A1-206ENST00000459895 PXDC1Q5TGL8 231 aa9.54□□□□□ -0.88
COL18A1-206ENST00000459895 TMEM37Q8WXS4 190 aa9.54□□□□□ -0.88
COL18A1-206ENST00000459895 PFDN2Q9UHV9 154 aa9.54□□□□□ -0.88
COL18A1-206ENST00000459895 A8MZ25 164 aa9.53□□□□□ -0.88
COL18A1-206ENST00000459895 DNASE2O00115 360 aaPredicted RBP9.53□□□□□ -0.88
COL18A1-206ENST00000459895 SOCS3O14543 225 aa9.53□□□□□ -0.88
COL18A1-206ENST00000459895 AP2S1P53680 142 aaPredicted RBP9.53□□□□□ -0.88
COL18A1-206ENST00000459895 PAFAH1B2P68402 229 aa9.53□□□□□ -0.88
COL18A1-206ENST00000459895 C10orf113Q5VZT2 155 aa9.53□□□□□ -0.88
COL18A1-206ENST00000459895 LINC00305Q7Z4B0 112 aa9.53□□□□□ -0.88
COL18A1-206ENST00000459895 APRG1Q8IVJ8 170 aa9.53□□□□□ -0.88
COL18A1-206ENST00000459895 OR8I2Q8N0Y5 310 aa9.53□□□□□ -0.88
COL18A1-206ENST00000459895 C17orf77Q96MU5 243 aa9.53□□□□□ -0.88
COL18A1-206ENST00000459895 B9D2Q9BPU9 175 aa9.53□□□□□ -0.88
COL18A1-206ENST00000459895 PARD6GQ9BYG4 376 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms