RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 SLC45A2Q9UMX9 530 aa16.2■□□□□ 0.18
SSNA1-202ENST00000459860 ORM2P19652 201 aa16.19■□□□□ 0.18
SSNA1-202ENST00000459860 GATA2P23769 480 aaPredicted RBP16.19■□□□□ 0.18
SSNA1-202ENST00000459860 S100A11P31949 105 aa16.19■□□□□ 0.18
SSNA1-202ENST00000459860 HAGHQ16775 308 aa16.19■□□□□ 0.18
SSNA1-202ENST00000459860 OR1B1Q8NGR6 318 aa16.19■□□□□ 0.18
SSNA1-202ENST00000459860 SLC25A31Q9H0C2 315 aa16.19■□□□□ 0.18
SSNA1-202ENST00000459860 U3KQK5 164 aa16.19■□□□□ 0.18
SSNA1-202ENST00000459860 HUWE1Q7Z6Z7 4374 aaKnown RBP16.18■□□□□ 0.18
SSNA1-202ENST00000459860 LOC102724200A0A096LPH7 203 aaPredicted RBP16.18■□□□□ 0.18
SSNA1-202ENST00000459860 IGSF23A1L1A6 192 aa16.18■□□□□ 0.18
SSNA1-202ENST00000459860 RAB31Q13636 194 aa16.18■□□□□ 0.18
SSNA1-202ENST00000459860 C1orf194Q5T5A4 169 aa16.18■□□□□ 0.18
SSNA1-202ENST00000459860 S100A7AQ86SG5 101 aa16.18■□□□□ 0.18
SSNA1-202ENST00000459860 ZNF546Q86UE3 836 aa16.18■□□□□ 0.18
SSNA1-202ENST00000459860 PPP1R1CQ8WVI7 109 aa16.18■□□□□ 0.18
SSNA1-202ENST00000459860 SPATA25Q9BR10 227 aa16.18■□□□□ 0.18
SSNA1-202ENST00000459860 GGTLC1Q9BX51 225 aa16.18■□□□□ 0.18
SSNA1-202ENST00000459860 MAP6D1Q9H9H5 199 aa16.18■□□□□ 0.18
SSNA1-202ENST00000459860 UQCC1Q9NVA1 299 aa16.18■□□□□ 0.18
SSNA1-202ENST00000459860 RBMY1BA6NDE4 496 aaKnown RBP16.17■□□□□ 0.18
SSNA1-202ENST00000459860 RBMY1EA6NEQ0 496 aaKnown RBP16.17■□□□□ 0.18
SSNA1-202ENST00000459860 RBMY1DP0C7P1 496 aaKnown RBP16.17■□□□□ 0.18
SSNA1-202ENST00000459860 LINC00869P0C866 280 aa16.17■□□□□ 0.18
SSNA1-202ENST00000459860 RAP2BP61225 183 aa16.17■□□□□ 0.18
SSNA1-202ENST00000459860 ATP6V1FQ16864 119 aa16.17■□□□□ 0.18
SSNA1-202ENST00000459860 LINC00322Q6ZN03 302 aaPredicted RBP16.17■□□□□ 0.18
SSNA1-202ENST00000459860 TM2D3Q9BRN9 247 aa16.17■□□□□ 0.18
SSNA1-202ENST00000459860 MED28Q9H204 178 aa16.17■□□□□ 0.18
SSNA1-202ENST00000459860 OR5AC2Q9NZP5 309 aa16.17■□□□□ 0.18
SSNA1-202ENST00000459860 K7EQG2 157 aa16.16■□□□□ 0.18
SSNA1-202ENST00000459860 TMEM182Q6ZP80 229 aaPredicted RBP16.16■□□□□ 0.18
SSNA1-202ENST00000459860 OR8I2Q8N0Y5 310 aa16.16■□□□□ 0.18
SSNA1-202ENST00000459860 NRN1Q9NPD7 142 aa16.16■□□□□ 0.18
SSNA1-202ENST00000459860 DNAH7Q8WXX0 4024 aa16.16■□□□□ 0.18
SSNA1-202ENST00000459860 DYNC2H1Q8NCM8 4307 aaKnown RBP16.15■□□□□ 0.18
SSNA1-202ENST00000459860 UBE2L5PA0A1B0GUS4 154 aa16.15■□□□□ 0.18
SSNA1-202ENST00000459860 AGPAT2O15120 278 aa16.15■□□□□ 0.18
SSNA1-202ENST00000459860 HYPMO75409 117 aa16.15■□□□□ 0.18
SSNA1-202ENST00000459860 APRG1Q8IVJ8 170 aa16.15■□□□□ 0.18
SSNA1-202ENST00000459860 RCHY1Q96PM5 261 aa16.15■□□□□ 0.18
SSNA1-202ENST00000459860 CITED4Q96RK1 184 aa16.15■□□□□ 0.18
SSNA1-202ENST00000459860 DOK5Q9P104 306 aa16.15■□□□□ 0.18
SSNA1-202ENST00000459860 HIGD1AQ9Y241 93 aa16.15■□□□□ 0.18
SSNA1-202ENST00000459860 RYR2Q92736 4967 aa16.15■□□□□ 0.18
SSNA1-202ENST00000459860 MPC2O95563 127 aa16.14■□□□□ 0.17
SSNA1-202ENST00000459860 OR5G3P0C626 314 aa16.14■□□□□ 0.17
SSNA1-202ENST00000459860 CAMLGP49069 296 aa16.14■□□□□ 0.17
SSNA1-202ENST00000459860 APOC4P55056 127 aa16.14■□□□□ 0.17
SSNA1-202ENST00000459860 DEFB131AP59861 70 aa16.14■□□□□ 0.17
SSNA1-202ENST00000459860 EWSR1Q01844 656 aaKnown RBP eCLIP16.14■□□□□ 0.17
SSNA1-202ENST00000459860 BAXQ07812 192 aa16.14■□□□□ 0.17
SSNA1-202ENST00000459860 PXDC1Q5TGL8 231 aa16.14■□□□□ 0.17
SSNA1-202ENST00000459860 DCANP1Q8TF63 244 aa16.14■□□□□ 0.17
SSNA1-202ENST00000459860 SLC25A22Q9H936 323 aa16.14■□□□□ 0.17
SSNA1-202ENST00000459860 H0YIZ8 118 aa16.13■□□□□ 0.17
SSNA1-202ENST00000459860 ZNF688P0C7X2 276 aa16.13■□□□□ 0.17
SSNA1-202ENST00000459860 GALR1P47211 349 aa16.13■□□□□ 0.17
SSNA1-202ENST00000459860 PLP1P60201 277 aa16.13■□□□□ 0.17
SSNA1-202ENST00000459860 SNRPD3P62318 126 aaKnown RBP16.13■□□□□ 0.17
SSNA1-202ENST00000459860 VWC2Q2TAL6 325 aa16.13■□□□□ 0.17
SSNA1-202ENST00000459860 GPR82Q96P67 336 aa16.13■□□□□ 0.17
SSNA1-202ENST00000459860 MGST2Q99735 147 aa16.13■□□□□ 0.17
SSNA1-202ENST00000459860 ARL6Q9H0F7 186 aa16.13■□□□□ 0.17
SSNA1-202ENST00000459860 RNF24Q9Y225 148 aa16.13■□□□□ 0.17
SSNA1-202ENST00000459860 WDR83OSQ9Y284 106 aa16.13■□□□□ 0.17
SSNA1-202ENST00000459860 ZNF98A6NK75 572 aa16.12■□□□□ 0.17
SSNA1-202ENST00000459860 FAM24BQ8N5W8 94 aa16.12■□□□□ 0.17
SSNA1-202ENST00000459860 STPG3Q8N7X2 389 aa16.12■□□□□ 0.17
SSNA1-202ENST00000459860 NHLH2Q02577 135 aa16.11■□□□□ 0.17
SSNA1-202ENST00000459860 FCN2Q15485 313 aa16.11■□□□□ 0.17
SSNA1-202ENST00000459860 SAMD13Q5VXD3 122 aa16.11■□□□□ 0.17
SSNA1-202ENST00000459860 OR5C1Q8NGR4 320 aa16.11■□□□□ 0.17
SSNA1-202ENST00000459860 SLC25A39Q9BZJ4 359 aaPredicted RBP16.11■□□□□ 0.17
SSNA1-202ENST00000459860 SEPSECSQ9HD40 501 aaKnown RBP16.11■□□□□ 0.17
SSNA1-202ENST00000459860 H3BRN7 92 aa16.1■□□□□ 0.17
SSNA1-202ENST00000459860 COX7A2P2O60397 106 aa16.1■□□□□ 0.17
SSNA1-202ENST00000459860 MPDU1O75352 247 aa16.1■□□□□ 0.17
SSNA1-202ENST00000459860 RPL35AP18077 110 aaKnown RBP16.1■□□□□ 0.17
SSNA1-202ENST00000459860 CXCL3P19876 107 aa16.1■□□□□ 0.17
SSNA1-202ENST00000459860 FGF7P21781 194 aa16.1■□□□□ 0.17
SSNA1-202ENST00000459860 MEOX2P50222 304 aa16.1■□□□□ 0.17
SSNA1-202ENST00000459860 OXA1LQ15070 435 aa16.1■□□□□ 0.17
SSNA1-202ENST00000459860 ZNF124Q15973 351 aa16.1■□□□□ 0.17
SSNA1-202ENST00000459860 LEMD1Q68G75 181 aa16.1■□□□□ 0.17
SSNA1-202ENST00000459860 Q6ZRG5 221 aa16.1■□□□□ 0.17
SSNA1-202ENST00000459860 THAP6Q8TBB0 222 aa16.1■□□□□ 0.17
SSNA1-202ENST00000459860 SHANK2-AS3Q9BTD1 123 aa16.1■□□□□ 0.17
SSNA1-202ENST00000459860 ARV1Q9H2C2 271 aa16.1■□□□□ 0.17
SSNA1-202ENST00000459860 SLC25A32Q9H2D1 315 aa16.1■□□□□ 0.17
SSNA1-202ENST00000459860 MBD2Q9UBB5 411 aa16.1■□□□□ 0.17
SSNA1-202ENST00000459860 STAB2Q8WWQ8 2551 aa16.1■□□□□ 0.17
SSNA1-202ENST00000459860 KIR2DL5BA0A0G2JN68 375 aa16.09■□□□□ 0.17
SSNA1-202ENST00000459860 KIR2DL5BA0A0G2JPC4 375 aa16.09■□□□□ 0.17
SSNA1-202ENST00000459860 ID1P41134 155 aa16.09■□□□□ 0.17
SSNA1-202ENST00000459860 PSMG4Q5JS54 123 aa16.09■□□□□ 0.17
SSNA1-202ENST00000459860 STHQ8IWL8 128 aa16.09■□□□□ 0.17
SSNA1-202ENST00000459860 KIR2DL5AQ8N109 375 aa16.09■□□□□ 0.17
SSNA1-202ENST00000459860 KIR2DL5BQ8NHK3 375 aa16.09■□□□□ 0.17
SSNA1-202ENST00000459860 ASB13Q8WXK3 278 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms