RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 HBG1P69891 147 aa11.99□□□□□ -0.49
CD28-203ENST00000458610 HBG2P69892 147 aa11.99□□□□□ -0.49
CD28-203ENST00000458610 STX12Q86Y82 276 aa11.99□□□□□ -0.49
CD28-203ENST00000458610 OR8I2Q8N0Y5 310 aa11.99□□□□□ -0.49
CD28-203ENST00000458610 CITED4Q96RK1 184 aa11.99□□□□□ -0.49
CD28-203ENST00000458610 NRN1Q9NPD7 142 aa11.99□□□□□ -0.49
CD28-203ENST00000458610 LYRM2Q9NU23 88 aaPredicted RBP11.99□□□□□ -0.49
CD28-203ENST00000458610 FAM24AA6NFZ4 105 aa11.98□□□□□ -0.49
CD28-203ENST00000458610 CCNKO75909 580 aa11.98□□□□□ -0.49
CD28-203ENST00000458610 ORM2P19652 201 aa11.98□□□□□ -0.49
CD28-203ENST00000458610 SULT1A1P50225 295 aa11.98□□□□□ -0.49
CD28-203ENST00000458610 DEFB131AP59861 70 aa11.98□□□□□ -0.49
CD28-203ENST00000458610 RAP2BP61225 183 aa11.98□□□□□ -0.49
CD28-203ENST00000458610 SNRPD3P62318 126 aaKnown RBP11.98□□□□□ -0.49
CD28-203ENST00000458610 ATP6V1FQ16864 119 aa11.98□□□□□ -0.49
CD28-203ENST00000458610 PXDC1Q5TGL8 231 aa11.98□□□□□ -0.49
CD28-203ENST00000458610 SAMD13Q5VXD3 122 aa11.98□□□□□ -0.49
CD28-203ENST00000458610 APRG1Q8IVJ8 170 aa11.98□□□□□ -0.49
CD28-203ENST00000458610 GPR82Q96P67 336 aa11.98□□□□□ -0.49
CD28-203ENST00000458610 SLC25A31Q9H0C2 315 aa11.98□□□□□ -0.49
CD28-203ENST00000458610 C11orf1Q9H5F2 150 aa11.98□□□□□ -0.49
CD28-203ENST00000458610 E5RGE8 158 aa11.97□□□□□ -0.49
CD28-203ENST00000458610 HYPMO75409 117 aa11.97□□□□□ -0.49
CD28-203ENST00000458610 SIX6O95475 246 aa11.97□□□□□ -0.49
CD28-203ENST00000458610 ID1P41134 155 aa11.97□□□□□ -0.49
CD28-203ENST00000458610 SLC38A11Q08AI6 406 aa11.97□□□□□ -0.49
CD28-203ENST00000458610 Q6ZWC4 215 aa11.97□□□□□ -0.49
CD28-203ENST00000458610 ZNF546Q86UE3 836 aa11.97□□□□□ -0.49
CD28-203ENST00000458610 TMEM252Q8N6L7 170 aa11.97□□□□□ -0.49
CD28-203ENST00000458610 OR1B1Q8NGR6 318 aa11.97□□□□□ -0.49
CD28-203ENST00000458610 DCANP1Q8TF63 244 aa11.97□□□□□ -0.49
CD28-203ENST00000458610 CST7O76096 145 aa11.96□□□□□ -0.49
CD28-203ENST00000458610 PET100P0DJ07 73 aa11.96□□□□□ -0.49
CD28-203ENST00000458610 GATA2P23769 480 aaPredicted RBP11.96□□□□□ -0.49
CD28-203ENST00000458610 GALR1P47211 349 aa11.96□□□□□ -0.49
CD28-203ENST00000458610 PLP1P60201 277 aa11.96□□□□□ -0.49
CD28-203ENST00000458610 ARL16Q0P5N6 197 aa11.96□□□□□ -0.49
CD28-203ENST00000458610 TMEM217Q8N7C4 229 aa11.96□□□□□ -0.49
CD28-203ENST00000458610 CSTL1Q9H114 145 aa11.96□□□□□ -0.49
CD28-203ENST00000458610 UQCC1Q9NVA1 299 aa11.96□□□□□ -0.49
CD28-203ENST00000458610 HIGD1AQ9Y241 93 aa11.96□□□□□ -0.49
CD28-203ENST00000458610 ZNF98A6NK75 572 aa11.95□□□□□ -0.5
CD28-203ENST00000458610 OR5G3P0C626 314 aa11.95□□□□□ -0.5
CD28-203ENST00000458610 ZNF688P0C7X2 276 aa11.95□□□□□ -0.5
CD28-203ENST00000458610 LINC00869P0C866 280 aa11.95□□□□□ -0.5
CD28-203ENST00000458610 RPL35AP18077 110 aaKnown RBP11.95□□□□□ -0.5
CD28-203ENST00000458610 MEOX2P50222 304 aa11.95□□□□□ -0.5
CD28-203ENST00000458610 TMEM182Q6ZP80 229 aaPredicted RBP11.95□□□□□ -0.5
CD28-203ENST00000458610 STHQ8IWL8 128 aa11.95□□□□□ -0.5
CD28-203ENST00000458610 TP53TG1Q9Y2A0 90 aa11.95□□□□□ -0.5
CD28-203ENST00000458610 AGPAT2O15120 278 aa11.94□□□□□ -0.5
CD28-203ENST00000458610 Q6ZRG5 221 aa11.94□□□□□ -0.5
CD28-203ENST00000458610 SLC25A22Q9H936 323 aa11.94□□□□□ -0.5
CD28-203ENST00000458610 SPRY2O43597 315 aa11.93□□□□□ -0.5
CD28-203ENST00000458610 CAMLGP49069 296 aa11.93□□□□□ -0.5
CD28-203ENST00000458610 H2BFSP57053 126 aa11.93□□□□□ -0.5
CD28-203ENST00000458610 VWC2Q2TAL6 325 aa11.93□□□□□ -0.5
CD28-203ENST00000458610 LRRC37A5PQ49AS3 106 aa11.93□□□□□ -0.5
CD28-203ENST00000458610 PSMG4Q5JS54 123 aa11.93□□□□□ -0.5
CD28-203ENST00000458610 LEMD1Q68G75 181 aa11.93□□□□□ -0.5
CD28-203ENST00000458610 FAM24BQ8N5W8 94 aa11.93□□□□□ -0.5
CD28-203ENST00000458610 PPP1R1CQ8WVI7 109 aa11.93□□□□□ -0.5
CD28-203ENST00000458610 SLC25A39Q9BZJ4 359 aaPredicted RBP11.93□□□□□ -0.5
CD28-203ENST00000458610 ARL6Q9H0F7 186 aa11.93□□□□□ -0.5
CD28-203ENST00000458610 DOK5Q9P104 306 aa11.93□□□□□ -0.5
CD28-203ENST00000458610 ELOA3CA0A087WX78 387 aaPredicted RBP11.92□□□□□ -0.5
CD28-203ENST00000458610 IGSF23A1L1A6 192 aa11.92□□□□□ -0.5
CD28-203ENST00000458610 C3orf84H3BNL1 204 aa11.92□□□□□ -0.5
CD28-203ENST00000458610 MPDU1O75352 247 aa11.92□□□□□ -0.5
CD28-203ENST00000458610 RPL7P18124 248 aaKnown RBP11.92□□□□□ -0.5
CD28-203ENST00000458610 BAXQ07812 192 aa11.92□□□□□ -0.5
CD28-203ENST00000458610 ZNF124Q15973 351 aa11.92□□□□□ -0.5
CD28-203ENST00000458610 TMEM41BQ5BJD5 291 aa11.92□□□□□ -0.5
CD28-203ENST00000458610 MORN3Q6PF18 240 aaPredicted RBP11.92□□□□□ -0.5
CD28-203ENST00000458610 IL17DQ8TAD2 202 aa11.92□□□□□ -0.5
CD28-203ENST00000458610 SHANK2-AS3Q9BTD1 123 aa11.92□□□□□ -0.5
CD28-203ENST00000458610 WDR83OSQ9Y284 106 aa11.92□□□□□ -0.5
CD28-203ENST00000458610 ALG5Q9Y673 324 aa11.92□□□□□ -0.5
CD28-203ENST00000458610 H3BRN7 92 aa11.91□□□□□ -0.5
CD28-203ENST00000458610 ISLRO14498 428 aa11.91□□□□□ -0.5
CD28-203ENST00000458610 PSMB3P49720 205 aa11.91□□□□□ -0.5
CD28-203ENST00000458610 RGS21Q2M5E4 152 aa11.91□□□□□ -0.5
CD28-203ENST00000458610 GATAD1Q8WUU5 269 aa11.91□□□□□ -0.5
CD28-203ENST00000458610 CHAC2Q8WUX2 184 aa11.91□□□□□ -0.5
CD28-203ENST00000458610 RNF183Q96D59 192 aa11.91□□□□□ -0.5
CD28-203ENST00000458610 MGST2Q99735 147 aa11.91□□□□□ -0.5
CD28-203ENST00000458610 OVOL2Q9BRP0 275 aa11.91□□□□□ -0.5
CD28-203ENST00000458610 RSG1Q9BU20 258 aa11.91□□□□□ -0.5
CD28-203ENST00000458610 MED28Q9H204 178 aa11.91□□□□□ -0.5
CD28-203ENST00000458610 RETNQ9HD89 108 aa11.91□□□□□ -0.5
CD28-203ENST00000458610 COX7A2P2O60397 106 aa11.9□□□□□ -0.5
CD28-203ENST00000458610 MPC2O95563 127 aa11.9□□□□□ -0.5
CD28-203ENST00000458610 SPP1P10451 314 aa11.9□□□□□ -0.5
CD28-203ENST00000458610 ATF4P18848 351 aaPredicted RBP11.9□□□□□ -0.5
CD28-203ENST00000458610 NUTF2P61970 127 aaKnown RBP11.9□□□□□ -0.5
CD28-203ENST00000458610 EWSR1Q01844 656 aaKnown RBP eCLIP11.9□□□□□ -0.5
CD28-203ENST00000458610 ACTL10Q5JWF8 245 aa11.9□□□□□ -0.5
CD28-203ENST00000458610 OR1L4Q8NGR5 311 aa11.9□□□□□ -0.5
CD28-203ENST00000458610 MUC7Q8TAX7 377 aa11.9□□□□□ -0.5
CD28-203ENST00000458610 C16orf92Q96LL3 132 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms