RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 PRR20CP86479 221 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 PRR20DP86480 221 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 PRR20BP86481 221 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 PRR20AP86496 221 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 MORN5Q5VZ52 161 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 LAMTOR1Q6IAA8 161 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 C9orf62Q8N4C0 152 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 ZNF709Q8N972 641 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 DYNLRB2Q8TF09 96 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 TMEM37Q8WXS4 190 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 PPP1R14BQ96C90 147 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 METTL26Q96S19 204 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 RNF2Q99496 336 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 GINS3Q9BRX5 216 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 ZNF471Q9BX82 626 aaPredicted RBP6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 VSIRQ9H7M9 311 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 SLC25A22Q9H936 323 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 DAZ1Q9NQZ3 744 aaKnown RBP6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 SLC39A9Q9NUM3 307 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 RABAC1Q9UI14 185 aa6.57□□□□□ -1.36
CLTCL1-204ENST00000458188 BORCS7-ASMTA0A0B4J1R7 106 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 KANTRA0A1W2PQU2 76 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 A8MWP6 167 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 BCL2L11O43521 198 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 COX7A2P2O60397 106 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 HNRNPCP07910 306 aaKnown RBP eCLIP6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 CRYBB3P26998 211 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 RPL29P47914 159 aaKnown RBP6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 TFPI2P48307 235 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 SELENOTP62341 195 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 RPL11P62913 178 aaKnown RBP6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 ZNF266Q14584 549 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 ZNF345Q14585 488 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 DEFB114Q30KQ6 69 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 CD300EQ496F6 205 aaPredicted RBP6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 FFAR4Q5NUL3 377 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 C9orf66Q5T8R8 295 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 SPATA31B1PQ5VZV4 182 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 Q6ZRG5 221 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 WFDC3Q8IUB2 231 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 GBGT1Q8N5D6 347 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 SCRT1Q9BWW7 348 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 ARV1Q9H2C2 271 aa6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 MRPL27Q9P0M9 148 aaKnown RBP6.56□□□□□ -1.36
CLTCL1-204ENST00000458188 C17orf112F2Z3M2 114 aa6.55□□□□□ -1.36
CLTCL1-204ENST00000458188 TAAR5O14804 337 aa6.55□□□□□ -1.36
CLTCL1-204ENST00000458188 MPDU1O75352 247 aa6.55□□□□□ -1.36
CLTCL1-204ENST00000458188 PRB2P02812 416 aaPredicted RBP6.55□□□□□ -1.36
CLTCL1-204ENST00000458188 C8orf88P0DMB2 117 aa6.55□□□□□ -1.36
CLTCL1-204ENST00000458188 KRTAP10-11P60412 298 aa6.55□□□□□ -1.36
CLTCL1-204ENST00000458188 GUCA2BQ16661 112 aa6.55□□□□□ -1.36
CLTCL1-204ENST00000458188 C10orf113Q5VZT2 155 aa6.55□□□□□ -1.36
CLTCL1-204ENST00000458188 LINC00305Q7Z4B0 112 aa6.55□□□□□ -1.36
CLTCL1-204ENST00000458188 SLC25A39Q9BZJ4 359 aaPredicted RBP6.55□□□□□ -1.36
CLTCL1-204ENST00000458188 SLC25A32Q9H2D1 315 aa6.55□□□□□ -1.36
CLTCL1-204ENST00000458188 DNAJC4Q9NNZ3 241 aa6.55□□□□□ -1.36
CLTCL1-204ENST00000458188 PLA2G2EQ9NZK7 142 aa6.55□□□□□ -1.36
CLTCL1-204ENST00000458188 HIGD1AQ9Y241 93 aa6.55□□□□□ -1.36
CLTCL1-204ENST00000458188 U3KQE9 123 aa6.55□□□□□ -1.36
CLTCL1-204ENST00000458188 VWFP04275 2813 aa6.55□□□□□ -1.36
CLTCL1-204ENST00000458188 PRKDCP78527 4128 aaKnown RBP6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 ZNF98A6NK75 572 aa6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 H3BTX0 84 aa6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 HMGB3O15347 200 aaKnown RBP6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 BUB3O43684 328 aa6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 JTBO76095 146 aa6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 CFDP00746 253 aaPredicted RBP6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 IGLV1-51P01701 117 aa6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 PRB4P10163 310 aaPredicted RBP6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 PLP1P60201 277 aa6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 RAB2AP61019 212 aa6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 FAM78BQ5VT40 261 aa6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 C16orf54Q6UWD8 224 aa6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 RBPMS2Q6ZRY4 209 aaKnown RBP6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 MIR17HGQ75NE6 70 aa6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 TCF24Q7RTU0 167 aa6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 TMEM61Q8N0U2 210 aa6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 OR2G3Q8NGZ4 309 aa6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 MCRIP2Q9BUT9 160 aaKnown RBP6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 PARD6GQ9BYG4 376 aaPredicted RBP6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 SEPSECSQ9HD40 501 aaKnown RBP6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 SMAD5-AS1Q9Y6J3 95 aa6.54□□□□□ -1.36
CLTCL1-204ENST00000458188 A0A1W2PS18 150 aa6.53□□□□□ -1.36
CLTCL1-204ENST00000458188 ZNF785A8K8V0 405 aa6.53□□□□□ -1.36
CLTCL1-204ENST00000458188 H3BRN7 92 aa6.53□□□□□ -1.36
CLTCL1-204ENST00000458188 SAMD5Q5TGI4 173 aa6.53□□□□□ -1.36
CLTCL1-204ENST00000458188 IGFL4Q6B9Z1 124 aa6.53□□□□□ -1.36
CLTCL1-204ENST00000458188 FAM122CQ6P4D5 195 aa6.53□□□□□ -1.36
CLTCL1-204ENST00000458188 OR8I2Q8N0Y5 310 aa6.53□□□□□ -1.36
CLTCL1-204ENST00000458188 OR10G4Q8NGN3 311 aa6.53□□□□□ -1.36
CLTCL1-204ENST00000458188 OR10G9Q8NGN4 311 aa6.53□□□□□ -1.36
CLTCL1-204ENST00000458188 OR10G7Q8NGN6 311 aa6.53□□□□□ -1.36
CLTCL1-204ENST00000458188 OR1L4Q8NGR5 311 aa6.53□□□□□ -1.36
CLTCL1-204ENST00000458188 GLMPQ8WWB7 406 aa6.53□□□□□ -1.36
CLTCL1-204ENST00000458188 MARC2Q969Z3 335 aa6.53□□□□□ -1.36
CLTCL1-204ENST00000458188 NARS2Q96I59 477 aaKnown RBP6.53□□□□□ -1.36
CLTCL1-204ENST00000458188 PRR25Q96S07 402 aa6.53□□□□□ -1.36
CLTCL1-204ENST00000458188 SHANK2-AS3Q9BTD1 123 aa6.53□□□□□ -1.36
CLTCL1-204ENST00000458188 ELOA3CA0A087WX78 387 aaPredicted RBP6.52□□□□□ -1.37
CLTCL1-204ENST00000458188 PXDC1Q5TGL8 231 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms