RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 AP2S1P53680 142 aaPredicted RBP10.48□□□□□ -0.73
HDAC4-205ENST00000454542 CYCSP99999 105 aaKnown RBP10.48□□□□□ -0.73
HDAC4-205ENST00000454542 TEPPQ6URK8 271 aa10.48□□□□□ -0.73
HDAC4-205ENST00000454542 STXBP6Q8NFX7 210 aa10.48□□□□□ -0.73
HDAC4-205ENST00000454542 SEPSECSQ9HD40 501 aaKnown RBP10.48□□□□□ -0.73
HDAC4-205ENST00000454542 PFDN2Q9UHV9 154 aa10.48□□□□□ -0.73
HDAC4-205ENST00000454542 H3BRN7 92 aa10.47□□□□□ -0.73
HDAC4-205ENST00000454542 DNASE2O00115 360 aaPredicted RBP10.47□□□□□ -0.73
HDAC4-205ENST00000454542 SSNA1O43805 119 aa10.47□□□□□ -0.73
HDAC4-205ENST00000454542 CST7O76096 145 aa10.47□□□□□ -0.73
HDAC4-205ENST00000454542 BCAP31P51572 246 aa10.47□□□□□ -0.73
HDAC4-205ENST00000454542 ZNF124Q15973 351 aa10.47□□□□□ -0.73
HDAC4-205ENST00000454542 STX12Q86Y82 276 aa10.47□□□□□ -0.73
HDAC4-205ENST00000454542 APRG1Q8IVJ8 170 aa10.47□□□□□ -0.73
HDAC4-205ENST00000454542 PPP1R1CQ8WVI7 109 aa10.47□□□□□ -0.73
HDAC4-205ENST00000454542 WWC2-AS2Q96NR7 200 aa10.47□□□□□ -0.73
HDAC4-205ENST00000454542 MGST2Q99735 147 aa10.47□□□□□ -0.73
HDAC4-205ENST00000454542 NRN1Q9NPD7 142 aa10.47□□□□□ -0.73
HDAC4-205ENST00000454542 OR5AC2Q9NZP5 309 aa10.47□□□□□ -0.73
HDAC4-205ENST00000454542 FBXL17Q9UF56 701 aa10.47□□□□□ -0.73
HDAC4-205ENST00000454542 KIR2DL5BA0A0G2JN68 375 aa10.46□□□□□ -0.73
HDAC4-205ENST00000454542 KIR2DL5BA0A0G2JPC4 375 aa10.46□□□□□ -0.73
HDAC4-205ENST00000454542 E5RGE8 158 aa10.46□□□□□ -0.73
HDAC4-205ENST00000454542 SOCS3O14543 225 aa10.46□□□□□ -0.73
HDAC4-205ENST00000454542 LINC00869P0C866 280 aa10.46□□□□□ -0.73
HDAC4-205ENST00000454542 RPL11P62913 178 aaKnown RBP10.46□□□□□ -0.73
HDAC4-205ENST00000454542 ZNF546Q86UE3 836 aa10.46□□□□□ -0.73
HDAC4-205ENST00000454542 WFDC3Q8IUB2 231 aa10.46□□□□□ -0.73
HDAC4-205ENST00000454542 KIR2DL5AQ8N109 375 aa10.46□□□□□ -0.73
HDAC4-205ENST00000454542 KIR2DL5BQ8NHK3 375 aa10.46□□□□□ -0.73
HDAC4-205ENST00000454542 TMEM147Q9BVK8 224 aa10.46□□□□□ -0.73
HDAC4-205ENST00000454542 UQCC1Q9NVA1 299 aa10.46□□□□□ -0.73
HDAC4-205ENST00000454542 WDR83OSQ9Y284 106 aa10.46□□□□□ -0.73
HDAC4-205ENST00000454542 ZNF98A6NK75 572 aa10.45□□□□□ -0.74
HDAC4-205ENST00000454542 AGPAT2O15120 278 aa10.45□□□□□ -0.74
HDAC4-205ENST00000454542 S100A11P31949 105 aa10.45□□□□□ -0.74
HDAC4-205ENST00000454542 DEFB131AP59861 70 aa10.45□□□□□ -0.74
HDAC4-205ENST00000454542 EWSR1Q01844 656 aaKnown RBP eCLIP10.45□□□□□ -0.74
HDAC4-205ENST00000454542 TMEM217Q8N7C4 229 aa10.45□□□□□ -0.74
HDAC4-205ENST00000454542 C17orf77Q96MU5 243 aa10.45□□□□□ -0.74
HDAC4-205ENST00000454542 SLC25A32Q9H2D1 315 aa10.45□□□□□ -0.74
HDAC4-205ENST00000454542 RETNQ9HD89 108 aa10.45□□□□□ -0.74
HDAC4-205ENST00000454542 MPC2O95563 127 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 ZNF688P0C7X2 276 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 LYL1P12980 280 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 ORM2P19652 201 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 CXCL3P19876 107 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 APOC4P55056 127 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 HBG1P69891 147 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 HBG2P69892 147 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 BAXQ07812 192 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 OPCMLQ14982 345 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 OXA1LQ15070 435 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 LRRC37A5PQ49AS3 106 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 PXDC1Q5TGL8 231 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 OR1B1Q8NGR6 318 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 CHAC2Q8WUX2 184 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 SHANK2-AS3Q9BTD1 123 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 RNF126Q9BV68 326 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 SCRT1Q9BWW7 348 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 SLC25A39Q9BZJ4 359 aaPredicted RBP10.44□□□□□ -0.74
HDAC4-205ENST00000454542 EDA2RQ9HAV5 297 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 HIGD1AQ9Y241 93 aa10.44□□□□□ -0.74
HDAC4-205ENST00000454542 UBE2L5PA0A1B0GUS4 154 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 UBE2CO00762 179 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 RLN2P04090 185 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 PET100P0DJ07 73 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 S100A7P31151 101 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 PRR20EP86478 221 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 PRR20CP86479 221 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 PRR20DP86480 221 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 PRR20BP86481 221 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 PRR20AP86496 221 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 ATP6V1FQ16864 119 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 RGS21Q2M5E4 152 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 LEMD1Q68G75 181 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 PATE2Q6UY27 113 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 Q6ZWC4 215 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 TRPT1Q86TN4 253 aaKnown RBP10.43□□□□□ -0.74
HDAC4-205ENST00000454542 OR11H7Q8NGC8 314 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 GPR82Q96P67 336 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 SLC25A31Q9H0C2 315 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 DOK5Q9P104 306 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 TP53TG1Q9Y2A0 90 aa10.43□□□□□ -0.74
HDAC4-205ENST00000454542 HYPMO75409 117 aa10.42□□□□□ -0.74
HDAC4-205ENST00000454542 CAMLGP49069 296 aa10.42□□□□□ -0.74
HDAC4-205ENST00000454542 PSMB3P49720 205 aa10.42□□□□□ -0.74
HDAC4-205ENST00000454542 RAP2BP61225 183 aa10.42□□□□□ -0.74
HDAC4-205ENST00000454542 SAMD13Q5VXD3 122 aa10.42□□□□□ -0.74
HDAC4-205ENST00000454542 OR8I2Q8N0Y5 310 aa10.42□□□□□ -0.74
HDAC4-205ENST00000454542 PPP1R14BQ96C90 147 aa10.42□□□□□ -0.74
HDAC4-205ENST00000454542 OVOL2Q9BRP0 275 aa10.42□□□□□ -0.74
HDAC4-205ENST00000454542 ARV1Q9H2C2 271 aa10.42□□□□□ -0.74
HDAC4-205ENST00000454542 STARD9Q9P2P6 4700 aa10.42□□□□□ -0.74
HDAC4-205ENST00000454542 MRPS12O15235 138 aaKnown RBP10.41□□□□□ -0.74
HDAC4-205ENST00000454542 MPDU1O75352 247 aa10.41□□□□□ -0.74
HDAC4-205ENST00000454542 RPL35AP18077 110 aaKnown RBP10.41□□□□□ -0.74
HDAC4-205ENST00000454542 GALR1P47211 349 aa10.41□□□□□ -0.74
HDAC4-205ENST00000454542 RPL29P47914 159 aaKnown RBP10.41□□□□□ -0.74
HDAC4-205ENST00000454542 MEOX2P50222 304 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms