RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 SULT1A2P50226 295 aa11.2□□□□□ -0.62
TNF-208ENST00000449264 PLP1P60201 277 aa11.2□□□□□ -0.62
TNF-208ENST00000449264 PXDC1Q5TGL8 231 aa11.2□□□□□ -0.62
TNF-208ENST00000449264 FAM78BQ5VT40 261 aa11.2□□□□□ -0.62
TNF-208ENST00000449264 SPATA31B1PQ5VZV4 182 aa11.2□□□□□ -0.62
TNF-208ENST00000449264 PATE2Q6UY27 113 aa11.2□□□□□ -0.62
TNF-208ENST00000449264 C12orf54Q6X4T0 127 aa11.2□□□□□ -0.62
TNF-208ENST00000449264 PCNPQ8WW12 178 aaKnown RBP11.2□□□□□ -0.62
TNF-208ENST00000449264 DNAJC4Q9NNZ3 241 aa11.2□□□□□ -0.62
TNF-208ENST00000449264 RABAC1Q9UI14 185 aa11.2□□□□□ -0.62
TNF-208ENST00000449264 A0A1W2PPV4 95 aa11.2□□□□□ -0.62
TNF-208ENST00000449264 ZNF705EA8MWA4 302 aaPredicted RBP11.2□□□□□ -0.62
TNF-208ENST00000449264 HMGB3O15347 200 aaKnown RBP11.2□□□□□ -0.62
TNF-208ENST00000449264 CDC34P49427 236 aaPredicted RBP11.2□□□□□ -0.62
TNF-208ENST00000449264 LINC00305Q7Z4B0 112 aa11.2□□□□□ -0.62
TNF-208ENST00000449264 GPHB5Q86YW7 130 aa11.2□□□□□ -0.62
TNF-208ENST00000449264 RPP25LQ8N5L8 163 aaKnown RBP11.2□□□□□ -0.62
TNF-208ENST00000449264 C3orf56Q8N813 242 aa11.2□□□□□ -0.62
TNF-208ENST00000449264 GATAD1Q8WUU5 269 aa11.2□□□□□ -0.62
TNF-208ENST00000449264 RNF141Q8WVD5 230 aa11.2□□□□□ -0.62
TNF-208ENST00000449264 SEPSECSQ9HD40 501 aaKnown RBP11.2□□□□□ -0.62
TNF-208ENST00000449264 ELOA3CA0A087WX78 387 aaPredicted RBP11.19□□□□□ -0.62
TNF-208ENST00000449264 IGHV3-49A0A0A0MS15 119 aa11.19□□□□□ -0.62
TNF-208ENST00000449264 RAB5CP51148 216 aa11.19□□□□□ -0.62
TNF-208ENST00000449264 RHOBP62745 196 aa11.19□□□□□ -0.62
TNF-208ENST00000449264 FHL3Q13643 280 aa11.19□□□□□ -0.62
TNF-208ENST00000449264 ZNF767PQ75MW2 155 aa11.19□□□□□ -0.62
TNF-208ENST00000449264 SSX7Q7RTT5 188 aa11.19□□□□□ -0.62
TNF-208ENST00000449264 C1QL4Q86Z23 238 aa11.19□□□□□ -0.62
TNF-208ENST00000449264 METTL26Q96S19 204 aa11.19□□□□□ -0.62
TNF-208ENST00000449264 SCRT1Q9BWW7 348 aa11.19□□□□□ -0.62
TNF-208ENST00000449264 SLC25A39Q9BZJ4 359 aaPredicted RBP11.19□□□□□ -0.62
TNF-208ENST00000449264 MRPL27Q9P0M9 148 aaKnown RBP11.19□□□□□ -0.62
TNF-208ENST00000449264 IGHV3OR16-13A0A075B7E8 117 aa11.18□□□□□ -0.62
TNF-208ENST00000449264 IGHV3-74A0A0B4J1X5 117 aa11.18□□□□□ -0.62
TNF-208ENST00000449264 A0A1B0GV50 99 aa11.18□□□□□ -0.62
TNF-208ENST00000449264 ZNF726P1Q15940 193 aa11.18□□□□□ -0.62
TNF-208ENST00000449264 TM4SF20Q53R12 229 aa11.18□□□□□ -0.62
TNF-208ENST00000449264 MORN5Q5VZ52 161 aa11.18□□□□□ -0.62
TNF-208ENST00000449264 LEMD1Q68G75 181 aa11.18□□□□□ -0.62
TNF-208ENST00000449264 MIR17HGQ75NE6 70 aa11.18□□□□□ -0.62
TNF-208ENST00000449264 ACTR3CQ9C0K3 210 aaPredicted RBP11.18□□□□□ -0.62
TNF-208ENST00000449264 FUT9Q9Y231 359 aa11.18□□□□□ -0.62
TNF-208ENST00000449264 IGHV3-66A0A0C4DH42 116 aa11.17□□□□□ -0.62
TNF-208ENST00000449264 KLF5Q13887 457 aaPredicted RBP11.17□□□□□ -0.62
TNF-208ENST00000449264 DLX4Q92988 240 aaPredicted RBP11.17□□□□□ -0.62
TNF-208ENST00000449264 RAB24Q969Q5 203 aa11.17□□□□□ -0.62
TNF-208ENST00000449264 RNF2Q99496 336 aa11.17□□□□□ -0.62
TNF-208ENST00000449264 MRPL32Q9BYC8 188 aaKnown RBP11.17□□□□□ -0.62
TNF-208ENST00000449264 DAZ1Q9NQZ3 744 aaKnown RBP11.17□□□□□ -0.62
TNF-208ENST00000449264 UFC1Q9Y3C8 167 aa11.17□□□□□ -0.62
TNF-208ENST00000449264 TRAV5A0A0B4J249 113 aa11.17□□□□□ -0.62
TNF-208ENST00000449264 CTXND1A0A1B0GTU2 59 aa11.17□□□□□ -0.62
TNF-208ENST00000449264 SEC14L6B5MCN3 397 aa11.17□□□□□ -0.62
TNF-208ENST00000449264 H3BRN7 92 aa11.17□□□□□ -0.62
TNF-208ENST00000449264 APOHP02749 345 aaPredicted RBP11.17□□□□□ -0.62
TNF-208ENST00000449264 PF4P02776 101 aa11.17□□□□□ -0.62
TNF-208ENST00000449264 EDN2P20800 178 aa11.17□□□□□ -0.62
TNF-208ENST00000449264 NPPCP23582 126 aa11.17□□□□□ -0.62
TNF-208ENST00000449264 LCN15Q6UWW0 184 aa11.17□□□□□ -0.62
TNF-208ENST00000449264 DPPA3Q6W0C5 159 aa11.17□□□□□ -0.62
TNF-208ENST00000449264 REC114Q7Z4M0 266 aa11.17□□□□□ -0.62
TNF-208ENST00000449264 ZNF747Q9BV97 191 aa11.17□□□□□ -0.62
TNF-208ENST00000449264 MAP1LC3B2A6NCE7 125 aa11.16□□□□□ -0.62
TNF-208ENST00000449264 FGF8P55075 233 aaPredicted RBP11.16□□□□□ -0.62
TNF-208ENST00000449264 S100A7AQ86SG5 101 aa11.16□□□□□ -0.62
TNF-208ENST00000449264 SHANK2-AS3Q9BTD1 123 aa11.16□□□□□ -0.62
TNF-208ENST00000449264 MAP1LC3BQ9GZQ8 125 aa11.16□□□□□ -0.62
TNF-208ENST00000449264 VWFP04275 2813 aa11.16□□□□□ -0.62
TNF-208ENST00000449264 TMEM213A2RRL7 107 aa11.15□□□□□ -0.62
TNF-208ENST00000449264 ZNF98A6NK75 572 aa11.15□□□□□ -0.62
TNF-208ENST00000449264 A8MWP6 167 aa11.15□□□□□ -0.62
TNF-208ENST00000449264 LGALS9O00182 355 aa11.15□□□□□ -0.62
TNF-208ENST00000449264 RGS13O14921 159 aa11.15□□□□□ -0.62
TNF-208ENST00000449264 H2AFB1P0C5Y9 115 aa11.15□□□□□ -0.62
TNF-208ENST00000449264 CRYBB3P26998 211 aa11.15□□□□□ -0.62
TNF-208ENST00000449264 MYCNOSP40205 109 aa11.15□□□□□ -0.62
TNF-208ENST00000449264 IQCF2Q8IXL9 164 aa11.15□□□□□ -0.62
TNF-208ENST00000449264 OR4F17Q8NGA8 305 aa11.15□□□□□ -0.62
TNF-208ENST00000449264 SFT2D1Q8WV19 159 aa11.15□□□□□ -0.62
TNF-208ENST00000449264 NARS2Q96I59 477 aaKnown RBP11.15□□□□□ -0.62
TNF-208ENST00000449264 OR4F4Q96R69 305 aa11.15□□□□□ -0.62
TNF-208ENST00000449264 SLC25A2Q9BXI2 301 aa11.15□□□□□ -0.62
TNF-208ENST00000449264 OR7C2O60412 319 aa11.14□□□□□ -0.63
TNF-208ENST00000449264 C8orf88P0DMB2 117 aa11.14□□□□□ -0.63
TNF-208ENST00000449264 S100A7P31151 101 aa11.14□□□□□ -0.63
TNF-208ENST00000449264 TAS2R45P59539 299 aa11.14□□□□□ -0.63
TNF-208ENST00000449264 RAB14P61106 215 aa11.14□□□□□ -0.63
TNF-208ENST00000449264 KHDC3LQ587J8 217 aa11.14□□□□□ -0.63
TNF-208ENST00000449264 OR9G4Q8NGQ1 327 aa11.14□□□□□ -0.63
TNF-208ENST00000449264 LRRC20Q8TCA0 184 aa11.14□□□□□ -0.63
TNF-208ENST00000449264 TECRQ9NZ01 308 aaKnown RBP11.14□□□□□ -0.63
TNF-208ENST00000449264 PEMTQ9UBM1 199 aa11.14□□□□□ -0.63
TNF-208ENST00000449264 PFDN2Q9UHV9 154 aa11.14□□□□□ -0.63
TNF-208ENST00000449264 SELENOKQ9Y6D0 94 aa11.14□□□□□ -0.63
TNF-208ENST00000449264 IGHV7-4-1A0A0J9YVY3 117 aa11.14□□□□□ -0.63
TNF-208ENST00000449264 K7EMT4 169 aa11.14□□□□□ -0.63
TNF-208ENST00000449264 NMBP08949 121 aa11.14□□□□□ -0.63
TNF-208ENST00000449264 ARL14EPLP0DKL9 152 aa11.14□□□□□ -0.63
TNF-208ENST00000449264 BLOC1S1P78537 153 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms