RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 TENM1Q9UKZ4 2725 aa14.77□□□□□ -0.05
RPS28-202ENST00000449223 IGHV3-35A0A0C4DH35 117 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 ADARB2-AS1A8MUL3 147 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 H2AFB1P0C5Y9 115 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 FHL3Q13643 280 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 RPEL1Q2QD12 228 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 KHDC1LQ5JSQ8 128 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 FAM122CQ6P4D5 195 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 LINC00305Q7Z4B0 112 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 UHRF2Q96PU4 802 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 PBDC1Q9BVG4 233 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 SLC25A39Q9BZJ4 359 aaPredicted RBP14.76□□□□□ -0.05
RPS28-202ENST00000449223 SLC25A22Q9H936 323 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 LINC01619G3V211 115 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 H3BRN7 92 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 LGALS9O00182 355 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 STAG3L2P0CL84 134 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 STAG3L3P0CL85 134 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 S100A7P31151 101 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 FAM106AQ4KMX7 169 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 UNQ9165/PRO28630Q6UXU0 137 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 REC114Q7Z4M0 266 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 NDUFA11Q86Y39 141 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 C11orf44Q8N8P7 122 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 SHANK2-AS3Q9BTD1 123 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 TECRQ9NZ01 308 aaKnown RBP14.76□□□□□ -0.05
RPS28-202ENST00000449223 RABAC1Q9UI14 185 aa14.76□□□□□ -0.05
RPS28-202ENST00000449223 A8MWP6 167 aa14.75□□□□□ -0.05
RPS28-202ENST00000449223 K7EMT4 169 aa14.75□□□□□ -0.05
RPS28-202ENST00000449223 CRYBB3P26998 211 aa14.75□□□□□ -0.05
RPS28-202ENST00000449223 HOXD3P31249 432 aaPredicted RBP14.75□□□□□ -0.05
RPS28-202ENST00000449223 MORN5Q5VZ52 161 aa14.75□□□□□ -0.05
RPS28-202ENST00000449223 SPATA31B1PQ5VZV4 182 aa14.75□□□□□ -0.05
RPS28-202ENST00000449223 C8orf86Q6ZUL3 223 aa14.75□□□□□ -0.05
RPS28-202ENST00000449223 OR11H1Q8NG94 326 aa14.75□□□□□ -0.05
RPS28-202ENST00000449223 RNF24Q9Y225 148 aa14.75□□□□□ -0.05
RPS28-202ENST00000449223 U3KQE9 123 aa14.75□□□□□ -0.05
RPS28-202ENST00000449223 MAP1LC3B2A6NCE7 125 aa14.74□□□□□ -0.05
RPS28-202ENST00000449223 NUDT19A8MXV4 375 aa14.74□□□□□ -0.05
RPS28-202ENST00000449223 HBE1P02100 147 aa14.74□□□□□ -0.05
RPS28-202ENST00000449223 C8orf88P0DMB2 117 aa14.74□□□□□ -0.05
RPS28-202ENST00000449223 TAS2R45P59539 299 aa14.74□□□□□ -0.05
RPS28-202ENST00000449223 KLF5Q13887 457 aaPredicted RBP14.74□□□□□ -0.05
RPS28-202ENST00000449223 MIR17HGQ75NE6 70 aa14.74□□□□□ -0.05
RPS28-202ENST00000449223 FAM167A-AS1Q96KT0 104 aa14.74□□□□□ -0.05
RPS28-202ENST00000449223 CITED1Q99966 193 aa14.74□□□□□ -0.05
RPS28-202ENST00000449223 MAP1LC3BQ9GZQ8 125 aa14.74□□□□□ -0.05
RPS28-202ENST00000449223 FBN1P35555 2871 aaKnown RBP14.73□□□□□ -0.05
RPS28-202ENST00000449223 DEFB136Q30KP8 78 aa14.73□□□□□ -0.05
RPS28-202ENST00000449223 KHDC3LQ587J8 217 aa14.73□□□□□ -0.05
RPS28-202ENST00000449223 C1QL4Q86Z23 238 aa14.73□□□□□ -0.05
RPS28-202ENST00000449223 OR1N2Q8NGR9 330 aa14.73□□□□□ -0.05
RPS28-202ENST00000449223 SFT2D1Q8WV19 159 aa14.73□□□□□ -0.05
RPS28-202ENST00000449223 METTL26Q96S19 204 aa14.73□□□□□ -0.05
RPS28-202ENST00000449223 DAZ1Q9NQZ3 744 aaKnown RBP14.73□□□□□ -0.05
RPS28-202ENST00000449223 TEX46H3BTG2 121 aa14.72□□□□□ -0.05
RPS28-202ENST00000449223 PMS2P11Q13670 270 aa14.72□□□□□ -0.05
RPS28-202ENST00000449223 PQLC2Q6ZP29 291 aa14.72□□□□□ -0.05
RPS28-202ENST00000449223 STXBP6Q8NFX7 210 aa14.72□□□□□ -0.05
RPS28-202ENST00000449223 PCNPQ8WW12 178 aaKnown RBP14.72□□□□□ -0.05
RPS28-202ENST00000449223 RAX2Q96IS3 184 aa14.72□□□□□ -0.05
RPS28-202ENST00000449223 SLC25A2Q9BXI2 301 aa14.72□□□□□ -0.05
RPS28-202ENST00000449223 PFDN2Q9UHV9 154 aa14.72□□□□□ -0.05
RPS28-202ENST00000449223 UFC1Q9Y3C8 167 aa14.72□□□□□ -0.05
RPS28-202ENST00000449223 ZNF98A6NK75 572 aa14.71□□□□□ -0.05
RPS28-202ENST00000449223 CXorf1O96002 111 aa14.71□□□□□ -0.05
RPS28-202ENST00000449223 LCN15Q6UWW0 184 aa14.71□□□□□ -0.05
RPS28-202ENST00000449223 DPF1Q92782 380 aa14.71□□□□□ -0.05
RPS28-202ENST00000449223 MED9Q9NWA0 146 aa14.71□□□□□ -0.05
RPS28-202ENST00000449223 BUB3O43684 328 aa14.71□□□□□ -0.06
RPS28-202ENST00000449223 NPPCP23582 126 aa14.71□□□□□ -0.06
RPS28-202ENST00000449223 C1orf194Q5T5A4 169 aa14.71□□□□□ -0.06
RPS28-202ENST00000449223 HIST2H2BDQ6DRA6 164 aa14.71□□□□□ -0.06
RPS28-202ENST00000449223 SUN5Q8TC36 379 aa14.71□□□□□ -0.06
RPS28-202ENST00000449223 ZNF503Q96F45 646 aa14.71□□□□□ -0.06
RPS28-202ENST00000449223 C20orf24Q9BUV8 137 aa14.71□□□□□ -0.06
RPS28-202ENST00000449223 SCRT1Q9BWW7 348 aa14.71□□□□□ -0.06
RPS28-202ENST00000449223 TMEM14CQ9P0S9 112 aa14.71□□□□□ -0.06
RPS28-202ENST00000449223 IGHV3OR16-8A0A075B7F1 116 aa14.7□□□□□ -0.06
RPS28-202ENST00000449223 CCL24O00175 119 aa14.7□□□□□ -0.06
RPS28-202ENST00000449223 HMGB3O15347 200 aaKnown RBP14.7□□□□□ -0.06
RPS28-202ENST00000449223 ARL14EPLP0DKL9 152 aa14.7□□□□□ -0.06
RPS28-202ENST00000449223 HRH4Q9H3N8 390 aa14.7□□□□□ -0.06
RPS28-202ENST00000449223 TRAV5A0A0B4J249 113 aa14.69□□□□□ -0.06
RPS28-202ENST00000449223 A0A1W2PRX2 142 aa14.69□□□□□ -0.06
RPS28-202ENST00000449223 ZNF320A2RRD8 509 aa14.69□□□□□ -0.06
RPS28-202ENST00000449223 TMEM213A2RRL7 107 aa14.69□□□□□ -0.06
RPS28-202ENST00000449223 LINC00862A6NCI5 91 aa14.69□□□□□ -0.06
RPS28-202ENST00000449223 MRPS12O15235 138 aaKnown RBP14.69□□□□□ -0.06
RPS28-202ENST00000449223 GP9P14770 177 aa14.69□□□□□ -0.06
RPS28-202ENST00000449223 SYNJ2BPP57105 145 aa14.69□□□□□ -0.06
RPS28-202ENST00000449223 TMEM158Q8WZ71 300 aa14.69□□□□□ -0.06
RPS28-202ENST00000449223 EIF3GO75821 320 aaKnown RBP eCLIP14.68□□□□□ -0.064e-11■■■■■ 28
RPS28-202ENST00000449223 PSMB3P49720 205 aa14.68□□□□□ -0.06
RPS28-202ENST00000449223 SLURP1P55000 103 aa14.68□□□□□ -0.06
RPS28-202ENST00000449223 FGF8P55075 233 aaPredicted RBP14.68□□□□□ -0.06
RPS28-202ENST00000449223 LEMD1Q68G75 181 aa14.68□□□□□ -0.06
RPS28-202ENST00000449223 IL34Q6ZMJ4 242 aa14.68□□□□□ -0.06
RPS28-202ENST00000449223 BPIFA4PQ86YQ2 179 aa14.68□□□□□ -0.06
RPS28-202ENST00000449223 GPR82Q96P67 336 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms