RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 TRGV9Q99603 122 aa20.23■□□□□ 0.83
CBX4-202ENST00000448310 SLC35B3Q9H1N7 401 aa20.23■□□□□ 0.83
CBX4-202ENST00000448310 SPART-AS1P0CW21 52 aa20.22■□□□□ 0.83
CBX4-202ENST00000448310 RAB11AP62491 216 aa20.22■□□□□ 0.83
CBX4-202ENST00000448310 OR8I2Q8N0Y5 310 aa20.22■□□□□ 0.83
CBX4-202ENST00000448310 POM121L12Q8N7R1 296 aa20.22■□□□□ 0.83
CBX4-202ENST00000448310 DUXBA0A1W2PPF3 345 aa20.21■□□□□ 0.83
CBX4-202ENST00000448310 VAMP1P23763 118 aa20.21■□□□□ 0.83
CBX4-202ENST00000448310 TRIM63Q969Q1 353 aa20.21■□□□□ 0.83
CBX4-202ENST00000448310 SMIM9A6NGZ8 99 aa20.2■□□□□ 0.82
CBX4-202ENST00000448310 NOL3O60936 208 aaKnown RBP20.2■□□□□ 0.82
CBX4-202ENST00000448310 P0DMU3 169 aa20.2■□□□□ 0.82
CBX4-202ENST00000448310 FAM231AP0DMU4 169 aa20.2■□□□□ 0.82
CBX4-202ENST00000448310 FAM231CP0DMU5 169 aa20.2■□□□□ 0.82
CBX4-202ENST00000448310 FAUP35544 74 aaKnown RBP20.2■□□□□ 0.82
CBX4-202ENST00000448310 ZNF79Q15937 498 aa20.2■□□□□ 0.82
CBX4-202ENST00000448310 TMEM128Q5BJH2 165 aa20.2■□□□□ 0.82
CBX4-202ENST00000448310 THAP8Q8NA92 274 aa20.2■□□□□ 0.82
CBX4-202ENST00000448310 MAGT1Q9H0U3 335 aa20.2■□□□□ 0.82
CBX4-202ENST00000448310 RFNGQ9Y644 331 aa20.2■□□□□ 0.82
CBX4-202ENST00000448310 TMEM189A5PLL7 270 aa20.19■□□□□ 0.82
CBX4-202ENST00000448310 FAM78BQ5VT40 261 aa20.19■□□□□ 0.82
CBX4-202ENST00000448310 C20orf173Q96LM9 149 aa20.19■□□□□ 0.82
CBX4-202ENST00000448310 CLUHP3Q96NS8 147 aa20.19■□□□□ 0.82
CBX4-202ENST00000448310 PLA2G2EQ9NZK7 142 aa20.19■□□□□ 0.82
CBX4-202ENST00000448310 M0R2N4 97 aa20.18■□□□□ 0.82
CBX4-202ENST00000448310 ISLRO14498 428 aa20.18■□□□□ 0.82
CBX4-202ENST00000448310 PSG9Q00887 426 aa20.18■□□□□ 0.82
CBX4-202ENST00000448310 PYDC2Q56P42 97 aa20.18■□□□□ 0.82
CBX4-202ENST00000448310 FAM222AQ5U5X8 452 aa20.18■□□□□ 0.82
CBX4-202ENST00000448310 EBLN2Q6P2I7 272 aa20.18■□□□□ 0.82
CBX4-202ENST00000448310 LINC00336Q6ZUF6 198 aa20.18■□□□□ 0.82
CBX4-202ENST00000448310 TOMM5Q8N4H5 51 aa20.18■□□□□ 0.82
CBX4-202ENST00000448310 LRTM2Q8N967 370 aa20.18■□□□□ 0.82
CBX4-202ENST00000448310 SLC25A32Q9H2D1 315 aa20.18■□□□□ 0.82
CBX4-202ENST00000448310 DKK2Q9UBU2 259 aa20.18■□□□□ 0.82
CBX4-202ENST00000448310 PIGBOS1A0A0B4J2F0 54 aa20.17■□□□□ 0.82
CBX4-202ENST00000448310 PAX9P55771 341 aa20.17■□□□□ 0.82
CBX4-202ENST00000448310 SLC25A22Q9H936 323 aa20.17■□□□□ 0.82
CBX4-202ENST00000448310 PKHD1P08F94 4074 aa20.16■□□□□ 0.82
CBX4-202ENST00000448310 A0A0J9YX75 114 aa20.16■□□□□ 0.82
CBX4-202ENST00000448310 PRSS46E5RG02 174 aa20.16■□□□□ 0.82
CBX4-202ENST00000448310 WRBO00258 174 aa20.16■□□□□ 0.82
CBX4-202ENST00000448310 MED6O75586 246 aa20.16■□□□□ 0.82
CBX4-202ENST00000448310 SLC25A6P12236 298 aa20.16■□□□□ 0.82
CBX4-202ENST00000448310 GATA2P23769 480 aaPredicted RBP20.16■□□□□ 0.82
CBX4-202ENST00000448310 C1orf158Q8N1D5 194 aa20.16■□□□□ 0.82
CBX4-202ENST00000448310 C16orf92Q96LL3 132 aa20.16■□□□□ 0.82
CBX4-202ENST00000448310 GOLT1BQ9Y3E0 138 aa20.16■□□□□ 0.82
CBX4-202ENST00000448310 PCLOQ9Y6V0 5065 aa20.16■□□□□ 0.82
CBX4-202ENST00000448310 HOXB5P09067 269 aa20.15■□□□□ 0.82
CBX4-202ENST00000448310 AP3S2P59780 193 aa20.15■□□□□ 0.82
CBX4-202ENST00000448310 PPP1R1AQ13522 171 aa20.15■□□□□ 0.82
CBX4-202ENST00000448310 SPATA31B1PQ5VZV4 182 aa20.15■□□□□ 0.82
CBX4-202ENST00000448310 TMEM182Q6ZP80 229 aaPredicted RBP20.15■□□□□ 0.82
CBX4-202ENST00000448310 C17orf77Q96MU5 243 aa20.15■□□□□ 0.82
CBX4-202ENST00000448310 C7orf50Q9BRJ6 194 aaKnown RBP20.15■□□□□ 0.82
CBX4-202ENST00000448310 NIPSNAP3BQ9BS92 247 aa20.15■□□□□ 0.82
CBX4-202ENST00000448310 V9GYH0 126 aa20.15■□□□□ 0.82
CBX4-202ENST00000448310 SYNGR2O43760 224 aa20.14■□□□□ 0.81
CBX4-202ENST00000448310 SFT2D2O95562 160 aa20.14■□□□□ 0.81
CBX4-202ENST00000448310 GGNBP1Q5YKI7 109 aa20.14■□□□□ 0.81
CBX4-202ENST00000448310 CIB3Q96Q77 187 aaPredicted RBP20.14■□□□□ 0.81
CBX4-202ENST00000448310 RSG1Q9BU20 258 aa20.14■□□□□ 0.81
CBX4-202ENST00000448310 RPRMQ9NS64 109 aa20.14■□□□□ 0.81
CBX4-202ENST00000448310 TMED3Q9Y3Q3 217 aa20.14■□□□□ 0.81
CBX4-202ENST00000448310 A0A1B0GVY2 172 aa20.13■□□□□ 0.81
CBX4-202ENST00000448310 ZNF98A6NK75 572 aa20.13■□□□□ 0.81
CBX4-202ENST00000448310 H3BP45 60 aa20.13■□□□□ 0.81
CBX4-202ENST00000448310 HTN3P15516 51 aa20.13■□□□□ 0.81
CBX4-202ENST00000448310 GALR1P47211 349 aa20.13■□□□□ 0.81
CBX4-202ENST00000448310 LOC102723971A0A1B0GUV8 181 aa20.12■□□□□ 0.81
CBX4-202ENST00000448310 HBE1P02100 147 aa20.12■□□□□ 0.81
CBX4-202ENST00000448310 ORM2P19652 201 aa20.12■□□□□ 0.81
CBX4-202ENST00000448310 MEOX2P50222 304 aa20.12■□□□□ 0.81
CBX4-202ENST00000448310 RPP30P78346 268 aaKnown RBP20.12■□□□□ 0.81
CBX4-202ENST00000448310 SPANXN5Q5MJ07 72 aa20.12■□□□□ 0.81
CBX4-202ENST00000448310 SLC25A21Q9BQT8 299 aaPredicted RBP20.12■□□□□ 0.81
CBX4-202ENST00000448310 DOK5Q9P104 306 aa20.12■□□□□ 0.81
CBX4-202ENST00000448310 YTHDF2Q9Y5A9 579 aaKnown RBP20.12■□□□□ 0.81
CBX4-202ENST00000448310 DYNC1H1Q14204 4646 aaKnown RBP20.11■□□□□ 0.81
CBX4-202ENST00000448310 RTL8CO15255 209 aa20.11■□□□□ 0.81
CBX4-202ENST00000448310 CFDP00746 253 aaPredicted RBP20.11■□□□□ 0.81
CBX4-202ENST00000448310 SAMD13Q5VXD3 122 aa20.11■□□□□ 0.81
CBX4-202ENST00000448310 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa20.11■□□□□ 0.81
CBX4-202ENST00000448310 UBE2DNLQ8IWF7 75 aa20.11■□□□□ 0.81
CBX4-202ENST00000448310 BPIFCQ8NFQ6 507 aa20.11■□□□□ 0.81
CBX4-202ENST00000448310 TEX48A0A1B0GUV7 120 aa20.1■□□□□ 0.81
CBX4-202ENST00000448310 AKR1C1Q04828 323 aa20.1■□□□□ 0.81
CBX4-202ENST00000448310 IGFL4Q6B9Z1 124 aa20.1■□□□□ 0.81
CBX4-202ENST00000448310 OR1B1Q8NGR6 318 aa20.1■□□□□ 0.81
CBX4-202ENST00000448310 SLC45A2Q9UMX9 530 aa20.1■□□□□ 0.81
CBX4-202ENST00000448310 IGLV2-18A0A075B6J9 118 aa20.09■□□□□ 0.81
CBX4-202ENST00000448310 PRSS29PA6NIE9 313 aa20.09■□□□□ 0.81
CBX4-202ENST00000448310 RRN3P1Q2M238 152 aa20.09■□□□□ 0.81
CBX4-202ENST00000448310 AMTNQ6UX39 209 aa20.09■□□□□ 0.81
CBX4-202ENST00000448310 ACOT7LQ6ZUV0 252 aa20.09■□□□□ 0.81
CBX4-202ENST00000448310 TMEM147Q9BVK8 224 aa20.09■□□□□ 0.81
CBX4-202ENST00000448310 PKD1P98161 4303 aa20.09■□□□□ 0.81
CBX4-202ENST00000448310 DNAH11Q96DT5 4516 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms