RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 IGHV1-46P01743 117 aa6.4□□□□□ -1.38
NEDD9-204ENST00000448183 FOXG1P55316 489 aaPredicted RBP6.4□□□□□ -1.38
NEDD9-204ENST00000448183 KLF17Q5JT82 389 aaPredicted RBP6.4□□□□□ -1.38
NEDD9-204ENST00000448183 LYZL1Q6UWQ5 148 aa6.4□□□□□ -1.38
NEDD9-204ENST00000448183 ABHD17AQ96GS6 310 aa6.4□□□□□ -1.38
NEDD9-204ENST00000448183 NBASA2RRP1 2371 aa6.4□□□□□ -1.38
NEDD9-204ENST00000448183 PAX8Q06710 450 aa6.4□□□□□ -1.38
NEDD9-204ENST00000448183 COLCA1Q6ZS62 124 aa6.4□□□□□ -1.38
NEDD9-204ENST00000448183 SCRT1Q9BWW7 348 aa6.4□□□□□ -1.38
NEDD9-204ENST00000448183 GBF1Q92538 1859 aa6.4□□□□□ -1.39
NEDD9-204ENST00000448183 PATJQ8NI35 1801 aa6.4□□□□□ -1.39
NEDD9-204ENST00000448183 IGKV2-40A0A087WW87 121 aaPredicted RBP6.4□□□□□ -1.39
NEDD9-204ENST00000448183 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.4□□□□□ -1.39
NEDD9-204ENST00000448183 IGKV2D-40P01614 121 aaPredicted RBP6.4□□□□□ -1.39
NEDD9-204ENST00000448183 CSRP2Q16527 193 aa6.4□□□□□ -1.39
NEDD9-204ENST00000448183 TPTE2P1Q5T6R2 138 aa6.4□□□□□ -1.39
NEDD9-204ENST00000448183 TMEM86BQ8N661 226 aa6.4□□□□□ -1.39
NEDD9-204ENST00000448183 RNASE6Q93091 150 aaKnown RBP6.4□□□□□ -1.39
NEDD9-204ENST00000448183 MBNL3Q9NUK0 354 aaKnown RBP6.4□□□□□ -1.39
NEDD9-204ENST00000448183 RALGAPA2Q2PPJ7 1873 aa6.4□□□□□ -1.39
NEDD9-204ENST00000448183 PKDREJQ9NTG1 2253 aa6.4□□□□□ -1.39
NEDD9-204ENST00000448183 A0A0U1RRA0 63 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 CD33P20138 364 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 NTF4P34130 210 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 GGNQ86UU5 652 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 LURAP1LQ8IV03 231 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 MESP1Q9BRJ9 268 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 PINLYPA6NC86 204 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 CD5LO43866 347 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 GFRA3O60609 400 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 SELLP14151 372 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 Q6ZS49 121 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 PLEKHB2Q96CS7 222 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 PNRC2Q9NPJ4 139 aaKnown RBP6.39□□□□□ -1.39
NEDD9-204ENST00000448183 CACNA1BQ00975 2339 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 TMEM8BA6NDV4 472 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 MALP21145 153 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 SIGLEC15Q6ZMC9 328 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 DLX4Q92988 240 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-204ENST00000448183 TRAV3A0A0B4J244 114 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 CDKN1AP38936 164 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 TDGF1P3P51864 188 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 STHQ8IWL8 128 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 BMPERQ8N8U9 685 aa6.39□□□□□ -1.39
NEDD9-204ENST00000448183 PSME4Q14997 1843 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 IGHV3-64A0A075B6Q5 118 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 C15orf62A8K5M9 175 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 PRTN3P24158 256 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 LTBRP36941 435 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 ZFP36L1Q07352 338 aaKnown RBP6.38□□□□□ -1.39
NEDD9-204ENST00000448183 KIR3DS1Q14943 382 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 ZC2HC1BQ5TFG8 222 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 SPSB3Q6PJ21 355 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 LHFPL4Q7Z7J7 247 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 SPRR3Q9UBC9 169 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 SELENOKQ9Y6D0 94 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 PI4KAP42356 2102 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 LYNX1G3V0Z9 82 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 MLNRO43193 412 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 CRPP02741 224 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 LYNX1P0DP58 116 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 RNF144BQ7Z419 303 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 RNF5Q99942 180 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 PRSS22Q9GZN4 317 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 GAGE12BA1L429 117 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 C5orf63A6NC05 138 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 ZNF138P52744 262 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 MST1LQ2TV78 715 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 GREB1Q4ZG55 1949 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 IGHV2-26A0A0B4J1V2 119 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 LINC00473A8K010 186 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 A8MWP6 167 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 EREGO14944 169 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 ESDP10768 282 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 HTN3P15516 51 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 RPL15P61313 204 aaKnown RBP6.38□□□□□ -1.39
NEDD9-204ENST00000448183 CFHR1Q03591 330 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 PRR31Q5SQ13 230 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 LYPD1Q8N2G4 141 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 KLHDC3Q9BQ90 382 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 C20orf144Q9BQM9 153 aa6.38□□□□□ -1.39
NEDD9-204ENST00000448183 DOCK6Q96HP0 2047 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 TRGV4A0A0C4DH28 118 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 A0A0G2JRQ6 117 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 Q0VG73 95 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 C15orf32Q32M92 178 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 GTSF1LQ9H1H1 148 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 TRAV8-1A0A0A6YYK1 113 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 ADARB2-AS1A8MUL3 147 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 C9JQL5 133 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 THBDP07204 575 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 IGHV1-8P0DP01 117 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 LINC00158P58513 81 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 ZNF876PQ49A33 203 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 CD177Q8N6Q3 437 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 DPH3P1Q9H4G8 78 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 PRDM6Q9NQX0 595 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 FER1L5A0AVI2 2057 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 FNDC10F2Z333 226 aa6.37□□□□□ -1.39
NEDD9-204ENST00000448183 SH2D1AO60880 128 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms