RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 APOHP02749 345 aaPredicted RBP7.01□□□□□ -1.29
PTPN3-204ENST00000446349 C21orf62-AS1Q17RA5 79 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 PARD6GQ9BYG4 376 aaPredicted RBP7.01□□□□□ -1.29
PTPN3-204ENST00000446349 PLXNB3Q9ULL4 1909 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 LYNX1G3V0Z9 82 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 ROS1P08922 2347 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 LYNX1P0DP58 116 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 TMEM131Q92545 1883 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 MST1P26927 711 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 LINC00311Q8N616 119 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 FGF16O43320 207 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 ZNHIT1O43257 154 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 GZMBP10144 247 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 FAM110DQ8TAY7 271 aaPredicted RBP7.01□□□□□ -1.29
PTPN3-204ENST00000446349 TOMM7Q9P0U1 55 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 LY96Q9Y6Y9 160 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 CEP192Q8TEP8 1941 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 H7C2G1 150 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 RNASE1P07998 156 aaKnown RBP7.01□□□□□ -1.29
PTPN3-204ENST00000446349 OR5A1Q8NGJ0 315 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 GNB1LQ9BYB4 327 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 SCO2A0A1W2PP80 73 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 CLPSP04118 112 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 RNF223E7ERA6 249 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 HBDP02042 147 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 ELANEP08246 267 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 SNRPCP09234 159 aaKnown RBP7□□□□□ -1.29
PTPN3-204ENST00000446349 NOTCH4Q99466 2003 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 RAMP3O60896 148 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 BIVMQ86UB2 503 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 MBD3L1Q8WWY6 194 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 DOCK11Q5JSL3 2073 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 VCYO14598 125 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 CDK2AP2O75956 126 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 GCSAMLQ5JQS6 135 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 PRO1933Q9H354 126 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 CARHSP1Q9Y2V2 147 aaKnown RBP7□□□□□ -1.29
PTPN3-204ENST00000446349 TRAV1-1A0A0B4J248 108 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 H3BTX0 84 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 LMO1P25800 156 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 CFHR2P36980 270 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 TSKUQ8WUA8 353 aa7□□□□□ -1.29
PTPN3-204ENST00000446349 ZNF815PA8K554 130 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 DPM2O94777 84 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 SS18Q15532 418 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 ASCL4Q6XD76 172 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 ARL6IP6Q8N6S5 226 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 PGPEP1Q9NXJ5 209 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 C2orf16Q68DN1 1984 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 USF3Q68DE3 2245 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 Q6P435 159 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 CD177Q8N6Q3 437 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 MPTX1A8MV57 137 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 WISP1O95388 367 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 CD28P10747 220 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 PLEKHB2Q96CS7 222 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 PNRC2Q9NPJ4 139 aaKnown RBP6.99□□□□□ -1.29
PTPN3-204ENST00000446349 A0A1B0GV72 72 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 SRP19P09132 144 aaKnown RBP6.99□□□□□ -1.29
PTPN3-204ENST00000446349 IGKV1D-13A0A0B4J2D9 117 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 MLNRO43193 412 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 IGKV1-13P0DP09 117 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 ZCCHC24Q8N2G6 241 aaKnown RBP6.99□□□□□ -1.29
PTPN3-204ENST00000446349 RASL10AQ92737 203 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 PSG1P11464 419 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 S4R3C0 116 aa6.99□□□□□ -1.29
PTPN3-204ENST00000446349 EFNA2O43921 213 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 YPEL3P61236 119 aaPredicted RBP6.98□□□□□ -1.29
PTPN3-204ENST00000446349 NMSQ5H8A3 153 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 TEX36Q5VZQ5 186 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 MRPL16Q9NX20 251 aaKnown RBP6.98□□□□□ -1.29
PTPN3-204ENST00000446349 KAAG1Q9UBP8 84 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 CHD3Q12873 2000 aaKnown RBP6.98□□□□□ -1.29
PTPN3-204ENST00000446349 TMEM219Q86XT9 240 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 C8orf31Q8N9H6 132 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 FGFBP3Q8TAT2 258 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 FOXL1Q12952 345 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 LHFPL1Q86WI0 220 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 TMEM158Q8WZ71 300 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 FOXC2Q99958 501 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 TMEM242Q9NWH2 141 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 LAGE3Q14657 143 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 CR1LQ2VPA4 569 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 TSSC4Q9Y5U2 329 aaPredicted RBP6.98□□□□□ -1.29
PTPN3-204ENST00000446349 ARFGEF3Q5TH69 2177 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 ZNF25P17030 456 aaPredicted RBP6.98□□□□□ -1.29
PTPN3-204ENST00000446349 PLP1P60201 277 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 EFNB1P98172 346 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 REG4Q9BYZ8 158 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 ZNF98A6NK75 572 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 PRSS33Q8NF86 280 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 CLDN16Q9Y5I7 305 aa6.98□□□□□ -1.29
PTPN3-204ENST00000446349 TMEM238C9JI98 176 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 COQ2Q96H96 371 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 A0A1B0GW64 132 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 NDUFA4O00483 81 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 IGLV1-44P01699 117 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 COL8A2P25067 703 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 PSG3Q16557 428 aa6.97□□□□□ -1.29
PTPN3-204ENST00000446349 OR2K2Q8NGT1 345 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms