RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 MBD3L4A6NDZ8 208 aaPredicted RBP11.4□□□□□ -0.58
ERCC3-203ENST00000445889 MBD3L3A6NE82 208 aaPredicted RBP11.4□□□□□ -0.58
ERCC3-203ENST00000445889 MBD3L5A6NJ08 208 aaPredicted RBP11.4□□□□□ -0.58
ERCC3-203ENST00000445889 M0R296 226 aa11.4□□□□□ -0.58
ERCC3-203ENST00000445889 LEPROTL1O95214 131 aa11.4□□□□□ -0.58
ERCC3-203ENST00000445889 TNFSF4P23510 183 aa11.4□□□□□ -0.58
ERCC3-203ENST00000445889 GATA4P43694 442 aa11.4□□□□□ -0.58
ERCC3-203ENST00000445889 FOXE3Q13461 319 aa11.4□□□□□ -0.58
ERCC3-203ENST00000445889 RASL11AQ6T310 242 aa11.4□□□□□ -0.58
ERCC3-203ENST00000445889 MBD3L2Q8NHZ7 208 aaPredicted RBP11.4□□□□□ -0.58
ERCC3-203ENST00000445889 LINC00312Q9Y6C7 94 aa11.4□□□□□ -0.58
ERCC3-203ENST00000445889 PTPRZ1P23471 2315 aaPredicted RBP11.4□□□□□ -0.58
ERCC3-203ENST00000445889 CBY3A6NI87 242 aa11.39□□□□□ -0.59
ERCC3-203ENST00000445889 P01737 135 aa11.39□□□□□ -0.59
ERCC3-203ENST00000445889 GPR82Q96P67 336 aa11.39□□□□□ -0.59
ERCC3-203ENST00000445889 S4R3C0 116 aa11.39□□□□□ -0.59
ERCC3-203ENST00000445889 IGHV1-69-2A0A0G2JMI3 117 aa11.39□□□□□ -0.59
ERCC3-203ENST00000445889 OR2J3O76001 311 aa11.39□□□□□ -0.59
ERCC3-203ENST00000445889 IGLV2-23P01705 113 aa11.39□□□□□ -0.59
ERCC3-203ENST00000445889 FAM120AOSQ5T036 256 aa11.39□□□□□ -0.59
ERCC3-203ENST00000445889 RPP21Q9H633 154 aaKnown RBP11.39□□□□□ -0.59
ERCC3-203ENST00000445889 MUC21A0A0G2JKD1 596 aa11.39□□□□□ -0.59
ERCC3-203ENST00000445889 MUC21A0A140T8X8 626 aa11.39□□□□□ -0.59
ERCC3-203ENST00000445889 A0A1B0GXF2 115 aa11.39□□□□□ -0.59
ERCC3-203ENST00000445889 MUC21Q5SSG8 566 aa11.39□□□□□ -0.59
ERCC3-203ENST00000445889 PRNTQ86SH4 94 aa11.39□□□□□ -0.59
ERCC3-203ENST00000445889 DAZAP1Q96EP5 407 aaKnown RBP11.39□□□□□ -0.59
ERCC3-203ENST00000445889 SYS1-DBNDD2H3BUS1 97 aa11.38□□□□□ -0.59
ERCC3-203ENST00000445889 LYZP61626 148 aa11.38□□□□□ -0.59
ERCC3-203ENST00000445889 C22orf15Q8WYQ4 148 aa11.38□□□□□ -0.59
ERCC3-203ENST00000445889 C17orf77Q96MU5 243 aa11.38□□□□□ -0.59
ERCC3-203ENST00000445889 Q9H3A6 140 aa11.38□□□□□ -0.59
ERCC3-203ENST00000445889 GAL3ST2Q9H3Q3 398 aa11.38□□□□□ -0.59
ERCC3-203ENST00000445889 WNK2Q9Y3S1 2297 aa11.38□□□□□ -0.59
ERCC3-203ENST00000445889 TM4SF5O14894 197 aa11.38□□□□□ -0.59
ERCC3-203ENST00000445889 TOMM40O96008 361 aa11.38□□□□□ -0.59
ERCC3-203ENST00000445889 TMEM167AQ8TBQ9 72 aa11.38□□□□□ -0.59
ERCC3-203ENST00000445889 CHEK1O14757 476 aa11.37□□□□□ -0.59
ERCC3-203ENST00000445889 MYCNOSP40205 109 aa11.37□□□□□ -0.59
ERCC3-203ENST00000445889 FXYD7P58549 80 aa11.37□□□□□ -0.59
ERCC3-203ENST00000445889 GOLT1AQ6ZVE7 132 aa11.37□□□□□ -0.59
ERCC3-203ENST00000445889 CHRDL1Q9BU40 450 aa11.37□□□□□ -0.59
ERCC3-203ENST00000445889 OR2T8A6NH00 312 aa11.37□□□□□ -0.59
ERCC3-203ENST00000445889 A8MWL6 223 aa11.37□□□□□ -0.59
ERCC3-203ENST00000445889 KLK10O43240 276 aa11.37□□□□□ -0.59
ERCC3-203ENST00000445889 FTH1P19P0C7X4 201 aa11.37□□□□□ -0.59
ERCC3-203ENST00000445889 SUB1P53999 127 aaKnown RBP eCLIP11.37□□□□□ -0.59
ERCC3-203ENST00000445889 ATP5IP56385 69 aaPredicted RBP11.37□□□□□ -0.59
ERCC3-203ENST00000445889 IGFL2Q6UWQ7 119 aa11.37□□□□□ -0.59
ERCC3-203ENST00000445889 CTSZQ9UBR2 303 aa11.37□□□□□ -0.59
ERCC3-203ENST00000445889 LYNX1G3V0Z9 82 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 LYNX1P0DP58 116 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 COL8A1P27658 744 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 ETFRF1Q6IPR1 90 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 ZADH2Q8N4Q0 377 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 A0A087X0K7 114 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 MRGPRG-AS1Q2M3A8 158 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 PERPQ96FX8 193 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 NCOR1P1Q9H4R4 102 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 LINC00574Q9H8X3 128 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 SPTA1P02549 2419 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 LOC102724200A0A096LPH7 203 aaPredicted RBP11.36□□□□□ -0.59
ERCC3-203ENST00000445889 IGHV2-70DA0A0C4DH43 119 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 TCRAP04437 139 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 ADIPOQQ15848 244 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 ATP5L2Q7Z4Y8 100 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 FAM169BQ8N8A8 192 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 MLST8Q9BVC4 326 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 TMUB1Q9BVT8 246 aa11.36□□□□□ -0.59
ERCC3-203ENST00000445889 PPIAL4EA0A075B759 164 aa11.35□□□□□ -0.59
ERCC3-203ENST00000445889 PPIAL4DF5H284 164 aa11.35□□□□□ -0.59
ERCC3-203ENST00000445889 PPIAL4FP0DN26 164 aa11.35□□□□□ -0.59
ERCC3-203ENST00000445889 C17orf100A8MU93 164 aa11.35□□□□□ -0.59
ERCC3-203ENST00000445889 RBP4P02753 201 aa11.35□□□□□ -0.59
ERCC3-203ENST00000445889 BSPH1Q075Z2 132 aa11.35□□□□□ -0.59
ERCC3-203ENST00000445889 TEX36Q5VZQ5 186 aa11.35□□□□□ -0.59
ERCC3-203ENST00000445889 SLC25A34Q6PIV7 304 aa11.35□□□□□ -0.59
ERCC3-203ENST00000445889 TEX45Q8NA69 505 aa11.35□□□□□ -0.59
ERCC3-203ENST00000445889 PRSS33Q8NF86 280 aa11.35□□□□□ -0.59
ERCC3-203ENST00000445889 TMSB15BA0A087X1C1 80 aa11.34□□□□□ -0.59
ERCC3-203ENST00000445889 HSBP1L1C9JCN9 74 aa11.34□□□□□ -0.59
ERCC3-203ENST00000445889 PSG1P11464 419 aa11.34□□□□□ -0.59
ERCC3-203ENST00000445889 ARHGAP32A7KAX9 2087 aa11.34□□□□□ -0.59
ERCC3-203ENST00000445889 NDUFB3O43676 98 aa11.34□□□□□ -0.59
ERCC3-203ENST00000445889 FAM106CPP0CH98 169 aa11.34□□□□□ -0.59
ERCC3-203ENST00000445889 FAM106AQ4KMX7 169 aa11.34□□□□□ -0.59
ERCC3-203ENST00000445889 AMMECR1LQ6DCA0 310 aa11.34□□□□□ -0.59
ERCC3-203ENST00000445889 RBPMS2Q6ZRY4 209 aaKnown RBP11.34□□□□□ -0.59
ERCC3-203ENST00000445889 VSTM2AQ8TAG5 236 aa11.34□□□□□ -0.59
ERCC3-203ENST00000445889 PRSS22Q9GZN4 317 aa11.34□□□□□ -0.59
ERCC3-203ENST00000445889 TAX1BP3O14907 124 aa11.33□□□□□ -0.6
ERCC3-203ENST00000445889 TNFRSF1AP19438 455 aa11.33□□□□□ -0.6
ERCC3-203ENST00000445889 COX7A1P24310 79 aa11.33□□□□□ -0.6
ERCC3-203ENST00000445889 VMA21Q3ZAQ7 101 aa11.33□□□□□ -0.6
ERCC3-203ENST00000445889 BVES-AS1Q5T3Y7 98 aa11.33□□□□□ -0.6
ERCC3-203ENST00000445889 C1orf185Q5T7R7 199 aa11.33□□□□□ -0.6
ERCC3-203ENST00000445889 THAP8Q8NA92 274 aa11.33□□□□□ -0.6
ERCC3-203ENST00000445889 SRSF12Q8WXF0 261 aaKnown RBP11.33□□□□□ -0.6
ERCC3-203ENST00000445889 FBXL15Q9H469 300 aa11.33□□□□□ -0.6
ERCC3-203ENST00000445889 KLF12Q9Y4X4 402 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms