RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 IGKV3-7A0A075B6H7 116 aa10.62□□□□□ -0.71
SSBP3-208ENST00000444533 C17orf112F2Z3M2 114 aa10.62□□□□□ -0.71
SSBP3-208ENST00000444533 OR5G3P0C626 314 aa10.62□□□□□ -0.71
SSBP3-208ENST00000444533 VWC2Q2TAL6 325 aa10.62□□□□□ -0.71
SSBP3-208ENST00000444533 C1orf194Q5T5A4 169 aa10.62□□□□□ -0.71
SSBP3-208ENST00000444533 SCGB1C1Q8TD33 95 aa10.62□□□□□ -0.71
SSBP3-208ENST00000444533 NEURL2Q9BR09 285 aa10.62□□□□□ -0.71
SSBP3-208ENST00000444533 HIGD1AQ9Y241 93 aa10.62□□□□□ -0.71
SSBP3-208ENST00000444533 WDR83OSQ9Y284 106 aa10.62□□□□□ -0.71
SSBP3-208ENST00000444533 HSPB11Q9Y547 144 aa10.62□□□□□ -0.71
SSBP3-208ENST00000444533 FXYD6-FXYD2A0A087WZ82 144 aa10.61□□□□□ -0.71
SSBP3-208ENST00000444533 ZNF785A8K8V0 405 aa10.61□□□□□ -0.71
SSBP3-208ENST00000444533 K7EIL1 84 aa10.61□□□□□ -0.71
SSBP3-208ENST00000444533 COX7A2P2O60397 106 aa10.61□□□□□ -0.71
SSBP3-208ENST00000444533 APOHP02749 345 aaPredicted RBP10.61□□□□□ -0.71
SSBP3-208ENST00000444533 LYL1P12980 280 aa10.61□□□□□ -0.71
SSBP3-208ENST00000444533 GATA2P23769 480 aaPredicted RBP10.61□□□□□ -0.71
SSBP3-208ENST00000444533 TFPI2P48307 235 aa10.61□□□□□ -0.71
SSBP3-208ENST00000444533 OR8I2Q8N0Y5 310 aa10.61□□□□□ -0.71
SSBP3-208ENST00000444533 STXBP6Q8NFX7 210 aa10.61□□□□□ -0.71
SSBP3-208ENST00000444533 ZNF414Q96IQ9 312 aa10.61□□□□□ -0.71
SSBP3-208ENST00000444533 ATP5SQ99766 215 aa10.61□□□□□ -0.71
SSBP3-208ENST00000444533 ARL6Q9H0F7 186 aa10.61□□□□□ -0.71
SSBP3-208ENST00000444533 LSM4Q9Y4Z0 139 aaKnown RBP10.61□□□□□ -0.71
SSBP3-208ENST00000444533 ELOA3CA0A087WX78 387 aaPredicted RBP10.6□□□□□ -0.71
SSBP3-208ENST00000444533 BUB3O43684 328 aa10.6□□□□□ -0.71
SSBP3-208ENST00000444533 GALR1P47211 349 aa10.6□□□□□ -0.71
SSBP3-208ENST00000444533 C16orf54Q6UWD8 224 aa10.6□□□□□ -0.71
SSBP3-208ENST00000444533 SIGLEC15Q6ZMC9 328 aa10.6□□□□□ -0.71
SSBP3-208ENST00000444533 WFDC3Q8IUB2 231 aa10.6□□□□□ -0.71
SSBP3-208ENST00000444533 GBGT1Q8N5D6 347 aa10.6□□□□□ -0.71
SSBP3-208ENST00000444533 STPG3Q8N7X2 389 aa10.6□□□□□ -0.71
SSBP3-208ENST00000444533 OR1L4Q8NGR5 311 aa10.6□□□□□ -0.71
SSBP3-208ENST00000444533 GPR82Q96P67 336 aa10.6□□□□□ -0.71
SSBP3-208ENST00000444533 PFDN5Q99471 154 aa10.6□□□□□ -0.71
SSBP3-208ENST00000444533 MGST2Q99735 147 aa10.6□□□□□ -0.71
SSBP3-208ENST00000444533 SLC25A22Q9H936 323 aa10.6□□□□□ -0.71
SSBP3-208ENST00000444533 DOK5Q9P104 306 aa10.6□□□□□ -0.71
SSBP3-208ENST00000444533 U3KQE9 123 aa10.6□□□□□ -0.71
SSBP3-208ENST00000444533 TRAV2A0A0B4J234 112 aa10.59□□□□□ -0.71
SSBP3-208ENST00000444533 OR11H12B2RN74 326 aa10.59□□□□□ -0.71
SSBP3-208ENST00000444533 RPL29P47914 159 aaKnown RBP10.59□□□□□ -0.71
SSBP3-208ENST00000444533 PLP1P60201 277 aa10.59□□□□□ -0.71
SSBP3-208ENST00000444533 B2MP61769 119 aa10.59□□□□□ -0.71
SSBP3-208ENST00000444533 ZNF266Q14584 549 aa10.59□□□□□ -0.71
SSBP3-208ENST00000444533 SAMD13Q5VXD3 122 aa10.59□□□□□ -0.71
SSBP3-208ENST00000444533 SMIM3Q9BZL3 60 aa10.59□□□□□ -0.71
SSBP3-208ENST00000444533 MS4A6AQ9H2W1 248 aa10.59□□□□□ -0.71
SSBP3-208ENST00000444533 CMYA5Q8N3K9 4069 aa10.58□□□□□ -0.71
SSBP3-208ENST00000444533 SNRPD3P62318 126 aaKnown RBP10.58□□□□□ -0.72
SSBP3-208ENST00000444533 C10orf113Q5VZT2 155 aa10.58□□□□□ -0.72
SSBP3-208ENST00000444533 FAM90A2PQ658T7 463 aa10.58□□□□□ -0.72
SSBP3-208ENST00000444533 CHAC2Q8WUX2 184 aa10.58□□□□□ -0.72
SSBP3-208ENST00000444533 GLMPQ8WWB7 406 aa10.58□□□□□ -0.72
SSBP3-208ENST00000444533 AQP10Q96PS8 301 aa10.58□□□□□ -0.72
SSBP3-208ENST00000444533 GGTLC1Q9BX51 225 aa10.58□□□□□ -0.72
SSBP3-208ENST00000444533 NPCDR1Q9BY65 106 aa10.58□□□□□ -0.72
SSBP3-208ENST00000444533 ARV1Q9H2C2 271 aa10.58□□□□□ -0.72
SSBP3-208ENST00000444533 ZNF98A6NK75 572 aa10.57□□□□□ -0.72
SSBP3-208ENST00000444533 CD7P09564 240 aa10.57□□□□□ -0.72
SSBP3-208ENST00000444533 IGHV4-30-4P0DP06 118 aa10.57□□□□□ -0.72
SSBP3-208ENST00000444533 RPL7P18124 248 aaKnown RBP10.57□□□□□ -0.72
SSBP3-208ENST00000444533 ID1P41134 155 aa10.57□□□□□ -0.72
SSBP3-208ENST00000444533 MEOX2P50222 304 aa10.57□□□□□ -0.72
SSBP3-208ENST00000444533 TMEM182Q6ZP80 229 aaPredicted RBP10.57□□□□□ -0.72
SSBP3-208ENST00000444533 FAM110AQ9BQ89 295 aa10.57□□□□□ -0.72
SSBP3-208ENST00000444533 SLC25A39Q9BZJ4 359 aaPredicted RBP10.57□□□□□ -0.72
SSBP3-208ENST00000444533 WDR61Q9GZS3 305 aaKnown RBP10.57□□□□□ -0.72
SSBP3-208ENST00000444533 DNAJC4Q9NNZ3 241 aa10.57□□□□□ -0.72
SSBP3-208ENST00000444533 NRN1Q9NPD7 142 aa10.57□□□□□ -0.72
SSBP3-208ENST00000444533 SLC39A9Q9NUM3 307 aa10.57□□□□□ -0.72
SSBP3-208ENST00000444533 BOLA1Q9Y3E2 137 aa10.57□□□□□ -0.72
SSBP3-208ENST00000444533 PXMP4Q9Y6I8 212 aa10.57□□□□□ -0.72
SSBP3-208ENST00000444533 BORCS7-ASMTA0A0B4J1R7 106 aa10.56□□□□□ -0.72
SSBP3-208ENST00000444533 ATF4P18848 351 aaPredicted RBP10.56□□□□□ -0.72
SSBP3-208ENST00000444533 OPCMLQ14982 345 aa10.56□□□□□ -0.72
SSBP3-208ENST00000444533 MIC13Q5XKP0 118 aa10.56□□□□□ -0.72
SSBP3-208ENST00000444533 LINC00305Q7Z4B0 112 aa10.56□□□□□ -0.72
SSBP3-208ENST00000444533 Q8N1Y9 231 aa10.56□□□□□ -0.72
SSBP3-208ENST00000444533 SHANK2-AS3Q9BTD1 123 aa10.56□□□□□ -0.72
SSBP3-208ENST00000444533 H3BRN7 92 aa10.55□□□□□ -0.72
SSBP3-208ENST00000444533 PRR20EP86478 221 aa10.55□□□□□ -0.72
SSBP3-208ENST00000444533 PRR20CP86479 221 aa10.55□□□□□ -0.72
SSBP3-208ENST00000444533 PRR20DP86480 221 aa10.55□□□□□ -0.72
SSBP3-208ENST00000444533 PRR20BP86481 221 aa10.55□□□□□ -0.72
SSBP3-208ENST00000444533 PRR20AP86496 221 aa10.55□□□□□ -0.72
SSBP3-208ENST00000444533 Q6ZNX1 250 aa10.55□□□□□ -0.72
SSBP3-208ENST00000444533 LRRC20Q8TCA0 184 aa10.55□□□□□ -0.72
SSBP3-208ENST00000444533 GATAD1Q8WUU5 269 aa10.55□□□□□ -0.72
SSBP3-208ENST00000444533 PARD6GQ9BYG4 376 aaPredicted RBP10.55□□□□□ -0.72
SSBP3-208ENST00000444533 SRD5A3Q9H8P0 318 aa10.55□□□□□ -0.72
SSBP3-208ENST00000444533 UBQLN2Q9UHD9 624 aa10.55□□□□□ -0.72
SSBP3-208ENST00000444533 A8MZ25 164 aa10.54□□□□□ -0.72
SSBP3-208ENST00000444533 ARPC5O15511 151 aa10.54□□□□□ -0.72
SSBP3-208ENST00000444533 Q5BKY6 102 aa10.54□□□□□ -0.72
SSBP3-208ENST00000444533 BPIFA4PQ86YQ2 179 aa10.54□□□□□ -0.72
SSBP3-208ENST00000444533 DEFB125Q8N687 156 aa10.54□□□□□ -0.72
SSBP3-208ENST00000444533 UHRF2Q96PU4 802 aa10.54□□□□□ -0.72
SSBP3-208ENST00000444533 B9D2Q9BPU9 175 aa10.54□□□□□ -0.72
SSBP3-208ENST00000444533 SCRT1Q9BWW7 348 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms