RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 LOC102724200A0A096LPH7 203 aaPredicted RBP12.98□□□□□ -0.33
SMARCAL1-209ENST00000444508 RBMY1BA6NDE4 496 aaKnown RBP12.98□□□□□ -0.33
SMARCAL1-209ENST00000444508 RBMY1EA6NEQ0 496 aaKnown RBP12.98□□□□□ -0.33
SMARCAL1-209ENST00000444508 RBMY1DP0C7P1 496 aaKnown RBP12.98□□□□□ -0.33
SMARCAL1-209ENST00000444508 PET100P0DJ07 73 aa12.98□□□□□ -0.33
SMARCAL1-209ENST00000444508 S100A11P31949 105 aa12.98□□□□□ -0.33
SMARCAL1-209ENST00000444508 C1orf194Q5T5A4 169 aa12.98□□□□□ -0.33
SMARCAL1-209ENST00000444508 OR1B1Q8NGR6 318 aa12.98□□□□□ -0.33
SMARCAL1-209ENST00000444508 PPP1R1CQ8WVI7 109 aa12.98□□□□□ -0.33
SMARCAL1-209ENST00000444508 SPATA25Q9BR10 227 aa12.98□□□□□ -0.33
SMARCAL1-209ENST00000444508 TM2D3Q9BRN9 247 aa12.98□□□□□ -0.33
SMARCAL1-209ENST00000444508 TMEM147Q9BVK8 224 aa12.98□□□□□ -0.33
SMARCAL1-209ENST00000444508 GGTLC1Q9BX51 225 aa12.98□□□□□ -0.33
SMARCAL1-209ENST00000444508 SLC25A31Q9H0C2 315 aa12.98□□□□□ -0.33
SMARCAL1-209ENST00000444508 MAP6D1Q9H9H5 199 aa12.98□□□□□ -0.33
SMARCAL1-209ENST00000444508 UQCC1Q9NVA1 299 aa12.98□□□□□ -0.33
SMARCAL1-209ENST00000444508 K7EQG2 157 aa12.97□□□□□ -0.33
SMARCAL1-209ENST00000444508 LINC00869P0C866 280 aa12.97□□□□□ -0.33
SMARCAL1-209ENST00000444508 RAB31Q13636 194 aa12.97□□□□□ -0.33
SMARCAL1-209ENST00000444508 TMEM182Q6ZP80 229 aaPredicted RBP12.97□□□□□ -0.33
SMARCAL1-209ENST00000444508 ZNF546Q86UE3 836 aa12.97□□□□□ -0.33
SMARCAL1-209ENST00000444508 APRG1Q8IVJ8 170 aa12.97□□□□□ -0.33
SMARCAL1-209ENST00000444508 CITED4Q96RK1 184 aa12.97□□□□□ -0.33
SMARCAL1-209ENST00000444508 MED28Q9H204 178 aa12.97□□□□□ -0.33
SMARCAL1-209ENST00000444508 NRN1Q9NPD7 142 aa12.97□□□□□ -0.33
SMARCAL1-209ENST00000444508 OR5AC2Q9NZP5 309 aa12.97□□□□□ -0.33
SMARCAL1-209ENST00000444508 STAB2Q8WWQ8 2551 aa12.96□□□□□ -0.33
SMARCAL1-209ENST00000444508 RAP2BP61225 183 aa12.96□□□□□ -0.33
SMARCAL1-209ENST00000444508 ATP6V1FQ16864 119 aa12.96□□□□□ -0.33
SMARCAL1-209ENST00000444508 S100A7AQ86SG5 101 aa12.96□□□□□ -0.33
SMARCAL1-209ENST00000444508 OR8I2Q8N0Y5 310 aa12.96□□□□□ -0.33
SMARCAL1-209ENST00000444508 RCHY1Q96PM5 261 aa12.96□□□□□ -0.33
SMARCAL1-209ENST00000444508 NBEAL2Q6ZNJ1 2754 aa12.95□□□□□ -0.34
SMARCAL1-209ENST00000444508 HUWE1Q7Z6Z7 4374 aaKnown RBP12.95□□□□□ -0.34
SMARCAL1-209ENST00000444508 H0YIZ8 118 aa12.95□□□□□ -0.34
SMARCAL1-209ENST00000444508 AGPAT2O15120 278 aa12.95□□□□□ -0.34
SMARCAL1-209ENST00000444508 HYPMO75409 117 aa12.95□□□□□ -0.34
SMARCAL1-209ENST00000444508 MPC2O95563 127 aa12.95□□□□□ -0.34
SMARCAL1-209ENST00000444508 OR5G3P0C626 314 aa12.95□□□□□ -0.34
SMARCAL1-209ENST00000444508 DEFB131AP59861 70 aa12.95□□□□□ -0.34
SMARCAL1-209ENST00000444508 FAM24BQ8N5W8 94 aa12.95□□□□□ -0.34
SMARCAL1-209ENST00000444508 STPG3Q8N7X2 389 aa12.95□□□□□ -0.34
SMARCAL1-209ENST00000444508 DCANP1Q8TF63 244 aa12.95□□□□□ -0.34
SMARCAL1-209ENST00000444508 SLC25A22Q9H936 323 aa12.95□□□□□ -0.34
SMARCAL1-209ENST00000444508 DOK5Q9P104 306 aa12.95□□□□□ -0.34
SMARCAL1-209ENST00000444508 HIGD1AQ9Y241 93 aa12.95□□□□□ -0.34
SMARCAL1-209ENST00000444508 UBE2L5PA0A1B0GUS4 154 aa12.94□□□□□ -0.34
SMARCAL1-209ENST00000444508 ZNF688P0C7X2 276 aa12.94□□□□□ -0.34
SMARCAL1-209ENST00000444508 CAMLGP49069 296 aa12.94□□□□□ -0.34
SMARCAL1-209ENST00000444508 APOC4P55056 127 aa12.94□□□□□ -0.34
SMARCAL1-209ENST00000444508 PLP1P60201 277 aa12.94□□□□□ -0.34
SMARCAL1-209ENST00000444508 EWSR1Q01844 656 aaKnown RBP eCLIP12.94□□□□□ -0.34
SMARCAL1-209ENST00000444508 BAXQ07812 192 aa12.94□□□□□ -0.34
SMARCAL1-209ENST00000444508 VWC2Q2TAL6 325 aa12.94□□□□□ -0.34
SMARCAL1-209ENST00000444508 PXDC1Q5TGL8 231 aa12.94□□□□□ -0.34
SMARCAL1-209ENST00000444508 MGST2Q99735 147 aa12.94□□□□□ -0.34
SMARCAL1-209ENST00000444508 ARL6Q9H0F7 186 aa12.94□□□□□ -0.34
SMARCAL1-209ENST00000444508 WDR83OSQ9Y284 106 aa12.94□□□□□ -0.34
SMARCAL1-209ENST00000444508 TENM3Q9P273 2699 aa12.94□□□□□ -0.34
SMARCAL1-209ENST00000444508 ZNF98A6NK75 572 aa12.93□□□□□ -0.34
SMARCAL1-209ENST00000444508 CXCL3P19876 107 aa12.93□□□□□ -0.34
SMARCAL1-209ENST00000444508 GALR1P47211 349 aa12.93□□□□□ -0.34
SMARCAL1-209ENST00000444508 SNRPD3P62318 126 aaKnown RBP12.93□□□□□ -0.34
SMARCAL1-209ENST00000444508 NHLH2Q02577 135 aa12.93□□□□□ -0.34
SMARCAL1-209ENST00000444508 FCN2Q15485 313 aa12.93□□□□□ -0.34
SMARCAL1-209ENST00000444508 ZNF124Q15973 351 aa12.93□□□□□ -0.34
SMARCAL1-209ENST00000444508 LEMD1Q68G75 181 aa12.93□□□□□ -0.34
SMARCAL1-209ENST00000444508 GPR82Q96P67 336 aa12.93□□□□□ -0.34
SMARCAL1-209ENST00000444508 RPL35AP18077 110 aaKnown RBP12.92□□□□□ -0.34
SMARCAL1-209ENST00000444508 OXA1LQ15070 435 aa12.92□□□□□ -0.34
SMARCAL1-209ENST00000444508 OR5C1Q8NGR4 320 aa12.92□□□□□ -0.34
SMARCAL1-209ENST00000444508 SHANK2-AS3Q9BTD1 123 aa12.92□□□□□ -0.34
SMARCAL1-209ENST00000444508 RNF126Q9BV68 326 aa12.92□□□□□ -0.34
SMARCAL1-209ENST00000444508 SLC25A39Q9BZJ4 359 aaPredicted RBP12.92□□□□□ -0.34
SMARCAL1-209ENST00000444508 SEPSECSQ9HD40 501 aaKnown RBP12.92□□□□□ -0.34
SMARCAL1-209ENST00000444508 H3BRN7 92 aa12.91□□□□□ -0.34
SMARCAL1-209ENST00000444508 MPDU1O75352 247 aa12.91□□□□□ -0.34
SMARCAL1-209ENST00000444508 FGF7P21781 194 aa12.91□□□□□ -0.34
SMARCAL1-209ENST00000444508 ID1P41134 155 aa12.91□□□□□ -0.34
SMARCAL1-209ENST00000444508 PSMG4Q5JS54 123 aa12.91□□□□□ -0.34
SMARCAL1-209ENST00000444508 Q6ZRG5 221 aa12.91□□□□□ -0.34
SMARCAL1-209ENST00000444508 SCRT1Q9BWW7 348 aa12.91□□□□□ -0.34
SMARCAL1-209ENST00000444508 ARV1Q9H2C2 271 aa12.91□□□□□ -0.34
SMARCAL1-209ENST00000444508 SLC25A32Q9H2D1 315 aa12.91□□□□□ -0.34
SMARCAL1-209ENST00000444508 MBD2Q9UBB5 411 aa12.91□□□□□ -0.34
SMARCAL1-209ENST00000444508 RNF24Q9Y225 148 aa12.91□□□□□ -0.34
SMARCAL1-209ENST00000444508 KIR2DL5BA0A0G2JN68 375 aa12.9□□□□□ -0.34
SMARCAL1-209ENST00000444508 KIR2DL5BA0A0G2JPC4 375 aa12.9□□□□□ -0.34
SMARCAL1-209ENST00000444508 UBE2CO00762 179 aa12.9□□□□□ -0.34
SMARCAL1-209ENST00000444508 COX7A2P2O60397 106 aa12.9□□□□□ -0.34
SMARCAL1-209ENST00000444508 MEOX2P50222 304 aa12.9□□□□□ -0.34
SMARCAL1-209ENST00000444508 CLINT1Q14677 625 aa12.9□□□□□ -0.34
SMARCAL1-209ENST00000444508 SAMD13Q5VXD3 122 aa12.9□□□□□ -0.34
SMARCAL1-209ENST00000444508 STHQ8IWL8 128 aa12.9□□□□□ -0.34
SMARCAL1-209ENST00000444508 KIR2DL5AQ8N109 375 aa12.9□□□□□ -0.34
SMARCAL1-209ENST00000444508 OR11H7Q8NGC8 314 aa12.9□□□□□ -0.34
SMARCAL1-209ENST00000444508 KIR2DL5BQ8NHK3 375 aa12.9□□□□□ -0.34
SMARCAL1-209ENST00000444508 THAP6Q8TBB0 222 aa12.9□□□□□ -0.34
SMARCAL1-209ENST00000444508 WWC2-AS2Q96NR7 200 aa12.9□□□□□ -0.34
SMARCAL1-209ENST00000444508 UHRF2Q96PU4 802 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms