RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 TRGV9Q99603 122 aa11.79□□□□□ -0.52
IFT140-204ENST00000439987 TNFRSF19Q9NS68 423 aa11.79□□□□□ -0.52
IFT140-204ENST00000439987 DOPEY2Q9Y3R5 2298 aa11.79□□□□□ -0.52
IFT140-204ENST00000439987 APCP25054 2843 aa11.79□□□□□ -0.52
IFT140-204ENST00000439987 PSMB11A5LHX3 300 aa11.79□□□□□ -0.52
IFT140-204ENST00000439987 NPIPB5A8MRT5 1133 aa11.79□□□□□ -0.52
IFT140-204ENST00000439987 RANP62826 216 aaKnown RBP11.79□□□□□ -0.52
IFT140-204ENST00000439987 DEFB113Q30KQ7 82 aa11.79□□□□□ -0.52
IFT140-204ENST00000439987 RASL11BQ9BPW5 248 aa11.79□□□□□ -0.52
IFT140-204ENST00000439987 CSMD1Q96PZ7 3565 aa11.79□□□□□ -0.52
IFT140-204ENST00000439987 A0A0U1RQK1 487 aa11.78□□□□□ -0.52
IFT140-204ENST00000439987 J3QKU1 62 aa11.78□□□□□ -0.52
IFT140-204ENST00000439987 GCHFRP30047 84 aa11.78□□□□□ -0.52
IFT140-204ENST00000439987 OR4F5Q8NH21 305 aa11.78□□□□□ -0.52
IFT140-204ENST00000439987 OR4F4Q96R69 305 aa11.78□□□□□ -0.52
IFT140-204ENST00000439987 C20orf144Q9BQM9 153 aa11.78□□□□□ -0.52
IFT140-204ENST00000439987 DNAJC4Q9NNZ3 241 aa11.78□□□□□ -0.52
IFT140-204ENST00000439987 HELZ2Q9BYK8 2649 aaKnown RBP11.78□□□□□ -0.52
IFT140-204ENST00000439987 UBE2G2P60604 165 aa11.78□□□□□ -0.52
IFT140-204ENST00000439987 TTC9CQ8N5M4 171 aa11.78□□□□□ -0.52
IFT140-204ENST00000439987 LINC01356Q8N9X3 169 aa11.78□□□□□ -0.52
IFT140-204ENST00000439987 MS4A10Q96PG2 267 aa11.78□□□□□ -0.52
IFT140-204ENST00000439987 MEGF9Q9H1U4 602 aa11.78□□□□□ -0.52
IFT140-204ENST00000439987 TECRQ9NZ01 308 aaKnown RBP11.78□□□□□ -0.52
IFT140-204ENST00000439987 C11orf94C9JXX5 98 aa11.77□□□□□ -0.52
IFT140-204ENST00000439987 K7EIM0 57 aa11.77□□□□□ -0.52
IFT140-204ENST00000439987 CD99P14209 185 aa11.77□□□□□ -0.52
IFT140-204ENST00000439987 ZNF705AQ6ZN79 300 aaPredicted RBP11.77□□□□□ -0.52
IFT140-204ENST00000439987 LRRC75A-AS1Q8N1F1 130 aa11.77□□□□□ -0.52
IFT140-204ENST00000439987 RPUSD4Q96CM3 377 aaKnown RBP11.77□□□□□ -0.52
IFT140-204ENST00000439987 PARLQ9H300 379 aa11.77□□□□□ -0.52
IFT140-204ENST00000439987 EGR2P11161 476 aaPredicted RBP11.77□□□□□ -0.53
IFT140-204ENST00000439987 KLF17Q5JT82 389 aaPredicted RBP11.77□□□□□ -0.53
IFT140-204ENST00000439987 OR1L4Q8NGR5 311 aa11.77□□□□□ -0.53
IFT140-204ENST00000439987 RNF2Q99496 336 aa11.77□□□□□ -0.53
IFT140-204ENST00000439987 HSPB9Q9BQS6 159 aa11.77□□□□□ -0.53
IFT140-204ENST00000439987 MIEN1Q9BRT3 115 aa11.77□□□□□ -0.53
IFT140-204ENST00000439987 MRPL32Q9BYC8 188 aaKnown RBP11.77□□□□□ -0.53
IFT140-204ENST00000439987 COX7A2P2O60397 106 aa11.76□□□□□ -0.53
IFT140-204ENST00000439987 AVPP01185 164 aa11.76□□□□□ -0.53
IFT140-204ENST00000439987 PCP4P48539 62 aa11.76□□□□□ -0.53
IFT140-204ENST00000439987 TAS2R45P59539 299 aa11.76□□□□□ -0.53
IFT140-204ENST00000439987 CST9LP1Q5W188 147 aa11.76□□□□□ -0.53
IFT140-204ENST00000439987 PIFOQ8TCI5 191 aa11.76□□□□□ -0.53
IFT140-204ENST00000439987 ZNF705FA8MVS1 300 aaPredicted RBP11.76□□□□□ -0.53
IFT140-204ENST00000439987 ZNF705DP0CH99 300 aaPredicted RBP11.76□□□□□ -0.53
IFT140-204ENST00000439987 ZNF705BP0CI00 300 aaPredicted RBP11.76□□□□□ -0.53
IFT140-204ENST00000439987 BPIFB3P59826 476 aa11.76□□□□□ -0.53
IFT140-204ENST00000439987 LOXL1Q08397 574 aaPredicted RBP11.76□□□□□ -0.53
IFT140-204ENST00000439987 ANKRD39Q53RE8 183 aa11.76□□□□□ -0.53
IFT140-204ENST00000439987 PATE2Q6UY27 113 aa11.76□□□□□ -0.53
IFT140-204ENST00000439987 PQLC2Q6ZP29 291 aa11.76□□□□□ -0.53
IFT140-204ENST00000439987 FANCD2OSQ96PS1 177 aa11.76□□□□□ -0.53
IFT140-204ENST00000439987 ELOVL1Q9BW60 279 aa11.76□□□□□ -0.53
IFT140-204ENST00000439987 IGLV11-55A0A075B6I3 123 aa11.75□□□□□ -0.53
IFT140-204ENST00000439987 IGLC1P0CG04 106 aa11.75□□□□□ -0.53
IFT140-204ENST00000439987 C8orf88P0DMB2 117 aa11.75□□□□□ -0.53
IFT140-204ENST00000439987 PAFAH1B2P68402 229 aa11.75□□□□□ -0.53
IFT140-204ENST00000439987 C10orf113Q5VZT2 155 aa11.75□□□□□ -0.53
IFT140-204ENST00000439987 TXNDC17Q9BRA2 123 aa11.75□□□□□ -0.53
IFT140-204ENST00000439987 GSX1Q9H4S2 264 aaPredicted RBP11.75□□□□□ -0.53
IFT140-204ENST00000439987 TRAPPC1Q9Y5R8 145 aa11.75□□□□□ -0.53
IFT140-204ENST00000439987 ZANQ9Y493 2812 aa11.75□□□□□ -0.53
IFT140-204ENST00000439987 NPSP0C0P6 89 aa11.75□□□□□ -0.53
IFT140-204ENST00000439987 ATP5G3P48201 142 aa11.75□□□□□ -0.53
IFT140-204ENST00000439987 C5orf56Q8N8D9 126 aa11.75□□□□□ -0.53
IFT140-204ENST00000439987 ZNF503Q96F45 646 aa11.75□□□□□ -0.53
IFT140-204ENST00000439987 RNF223E7ERA6 249 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 PDE6DO43924 150 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 OR7C2O60412 319 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 RPL15P61313 204 aaKnown RBP11.74□□□□□ -0.53
IFT140-204ENST00000439987 Q5PR19 223 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 MORN5Q5VZ52 161 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 TMEM219Q86XT9 240 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 MAPK1IP1LQ8NDC0 245 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 SGMS2Q8NHU3 365 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 TMEM167BQ9NRX6 74 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 OR5T1Q8NG75 326 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 UHRF2Q96PU4 802 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 MOB4Q9Y3A3 225 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 YTHDF2Q9Y5A9 579 aaKnown RBP11.74□□□□□ -0.53
IFT140-204ENST00000439987 SOX21Q9Y651 276 aaPredicted RBP11.74□□□□□ -0.53
IFT140-204ENST00000439987 CSPG4Q6UVK1 2322 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 CREBBPQ92793 2442 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 FOXL1Q12952 345 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 TMEM183BQ1AE95 376 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 TEX43Q6ZNM6 134 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 FAM167A-AS1Q96KT0 104 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 PSMG3-AS1Q96PY0 264 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 ZNF355PQ9NSJ1 428 aa11.74□□□□□ -0.53
IFT140-204ENST00000439987 TRAV5A0A0B4J249 113 aa11.73□□□□□ -0.53
IFT140-204ENST00000439987 ATP6V0E1O15342 81 aa11.73□□□□□ -0.53
IFT140-204ENST00000439987 ORM2P19652 201 aa11.73□□□□□ -0.53
IFT140-204ENST00000439987 OR1B1Q8NGR6 318 aa11.73□□□□□ -0.53
IFT140-204ENST00000439987 SLC25A2Q9BXI2 301 aa11.73□□□□□ -0.53
IFT140-204ENST00000439987 THYN1Q9P016 225 aa11.73□□□□□ -0.53
IFT140-204ENST00000439987 J3QLI3 93 aa11.73□□□□□ -0.53
IFT140-204ENST00000439987 TGFAP01135 160 aa11.73□□□□□ -0.53
IFT140-204ENST00000439987 IGKV1-17P01599 117 aa11.73□□□□□ -0.53
IFT140-204ENST00000439987 NPPCP23582 126 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms