RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 PRAF2O60831 178 aa7.73□□□□□ -1.17
MCF2L-216ENST00000439475 MBPP02686 304 aaPredicted RBP7.73□□□□□ -1.17
MCF2L-216ENST00000439475 ZNF688P0C7X2 276 aa7.73□□□□□ -1.17
MCF2L-216ENST00000439475 ORM2P19652 201 aa7.73□□□□□ -1.17
MCF2L-216ENST00000439475 PAX9P55771 341 aa7.73□□□□□ -1.17
MCF2L-216ENST00000439475 RAP2BP61225 183 aa7.73□□□□□ -1.17
MCF2L-216ENST00000439475 RRAS2P62070 204 aaPredicted RBP7.73□□□□□ -1.17
MCF2L-216ENST00000439475 ZNF124Q15973 351 aa7.73□□□□□ -1.17
MCF2L-216ENST00000439475 DEFB135Q30KP9 77 aa7.73□□□□□ -1.17
MCF2L-216ENST00000439475 CASC10Q5T4H9 136 aa7.73□□□□□ -1.17
MCF2L-216ENST00000439475 MORN3Q6PF18 240 aaPredicted RBP7.73□□□□□ -1.17
MCF2L-216ENST00000439475 CYP2G1PQ6ZSU1 146 aa7.73□□□□□ -1.17
MCF2L-216ENST00000439475 TMEM217Q8N7C4 229 aa7.73□□□□□ -1.17
MCF2L-216ENST00000439475 DCANP1Q8TF63 244 aa7.73□□□□□ -1.17
MCF2L-216ENST00000439475 RNF183Q96D59 192 aa7.73□□□□□ -1.17
MCF2L-216ENST00000439475 IGKV1OR2-108A0A075B7D4 117 aa7.72□□□□□ -1.17
MCF2L-216ENST00000439475 C7orf66A4D0T2 115 aa7.72□□□□□ -1.17
MCF2L-216ENST00000439475 INMT-MINDY4F8WBC2 141 aa7.72□□□□□ -1.17
MCF2L-216ENST00000439475 K7EPK0 472 aa7.72□□□□□ -1.17
MCF2L-216ENST00000439475 RLN2P04090 185 aa7.72□□□□□ -1.17
MCF2L-216ENST00000439475 MEOX2P50222 304 aa7.72□□□□□ -1.17
MCF2L-216ENST00000439475 NUTF2P61970 127 aaKnown RBP7.72□□□□□ -1.17
MCF2L-216ENST00000439475 RAB31Q13636 194 aa7.72□□□□□ -1.17
MCF2L-216ENST00000439475 PSMG4Q5JS54 123 aa7.72□□□□□ -1.17
MCF2L-216ENST00000439475 TEPPQ6URK8 271 aa7.72□□□□□ -1.17
MCF2L-216ENST00000439475 FAM24BQ8N5W8 94 aa7.72□□□□□ -1.17
MCF2L-216ENST00000439475 OR1B1Q8NGR6 318 aa7.72□□□□□ -1.17
MCF2L-216ENST00000439475 GATAD1Q8WUU5 269 aa7.72□□□□□ -1.17
MCF2L-216ENST00000439475 GPR82Q96P67 336 aa7.72□□□□□ -1.17
MCF2L-216ENST00000439475 ZNF98A6NK75 572 aa7.71□□□□□ -1.18
MCF2L-216ENST00000439475 GOSR2O14653 212 aa7.71□□□□□ -1.18
MCF2L-216ENST00000439475 HYPMO75409 117 aa7.71□□□□□ -1.18
MCF2L-216ENST00000439475 DEDDO75618 318 aa7.71□□□□□ -1.18
MCF2L-216ENST00000439475 CA1P00915 261 aaPredicted RBP7.71□□□□□ -1.18
MCF2L-216ENST00000439475 SPP1P10451 314 aa7.71□□□□□ -1.18
MCF2L-216ENST00000439475 GALR1P47211 349 aa7.71□□□□□ -1.18
MCF2L-216ENST00000439475 CAV2P51636 162 aa7.71□□□□□ -1.18
MCF2L-216ENST00000439475 S100A10P60903 97 aa7.71□□□□□ -1.18
MCF2L-216ENST00000439475 CYCSP99999 105 aaKnown RBP7.71□□□□□ -1.18
MCF2L-216ENST00000439475 PXDC1Q5TGL8 231 aa7.71□□□□□ -1.18
MCF2L-216ENST00000439475 ZFAND6Q6FIF0 208 aa7.71□□□□□ -1.18
MCF2L-216ENST00000439475 NRARPQ7Z6K4 114 aa7.71□□□□□ -1.18
MCF2L-216ENST00000439475 RARRES2Q99969 163 aa7.71□□□□□ -1.18
MCF2L-216ENST00000439475 SLC25A22Q9H936 323 aa7.71□□□□□ -1.18
MCF2L-216ENST00000439475 OR5G3P0C626 314 aa7.7□□□□□ -1.18
MCF2L-216ENST00000439475 GATA2P23769 480 aaPredicted RBP7.7□□□□□ -1.18
MCF2L-216ENST00000439475 ACTL10Q5JWF8 245 aa7.7□□□□□ -1.18
MCF2L-216ENST00000439475 STX12Q86Y82 276 aa7.7□□□□□ -1.18
MCF2L-216ENST00000439475 LINC00052Q96N35 136 aa7.7□□□□□ -1.18
MCF2L-216ENST00000439475 HIGD1AQ9Y241 93 aa7.7□□□□□ -1.18
MCF2L-216ENST00000439475 FAM24AA6NFZ4 105 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 KNCNA6PVL3 124 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 CCNKO75909 580 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 LINC00869P0C866 280 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 RPL7P18124 248 aaKnown RBP7.69□□□□□ -1.18
MCF2L-216ENST00000439475 S100A11P31949 105 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 PSMB3P49720 205 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 PLP1P60201 277 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 HBG1P69891 147 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 HBG2P69892 147 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 IFITM3Q01628 133 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 SLC38A11Q08AI6 406 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 RAB32Q13637 225 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 ATP6V1FQ16864 119 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 SPATA31B1PQ5VZV4 182 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 TMEM182Q6ZP80 229 aaPredicted RBP7.69□□□□□ -1.18
MCF2L-216ENST00000439475 Q6ZRG5 221 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 TRPT1Q86TN4 253 aaKnown RBP7.69□□□□□ -1.18
MCF2L-216ENST00000439475 ZNF546Q86UE3 836 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 OR11H2Q8NH07 326 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 C16orf92Q96LL3 132 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 MARVELD1Q9BSK0 173 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 C1QTNF4Q9BXJ3 329 aa7.69□□□□□ -1.18
MCF2L-216ENST00000439475 A0A0J9YWU9 116 aa7.68□□□□□ -1.18
MCF2L-216ENST00000439475 ISLRO14498 428 aa7.68□□□□□ -1.18
MCF2L-216ENST00000439475 CST7O76096 145 aa7.68□□□□□ -1.18
MCF2L-216ENST00000439475 ATF4P18848 351 aaPredicted RBP7.68□□□□□ -1.18
MCF2L-216ENST00000439475 SULT1A1P50225 295 aa7.68□□□□□ -1.18
MCF2L-216ENST00000439475 IL15RAQ13261 267 aa7.68□□□□□ -1.18
MCF2L-216ENST00000439475 EBLN2Q6P2I7 272 aa7.68□□□□□ -1.18
MCF2L-216ENST00000439475 TMEM252Q8N6L7 170 aa7.68□□□□□ -1.18
MCF2L-216ENST00000439475 RSG1Q9BU20 258 aa7.68□□□□□ -1.18
MCF2L-216ENST00000439475 SLC25A39Q9BZJ4 359 aaPredicted RBP7.68□□□□□ -1.18
MCF2L-216ENST00000439475 NMES1Q9C002 83 aa7.68□□□□□ -1.18
MCF2L-216ENST00000439475 SLC25A31Q9H0C2 315 aa7.68□□□□□ -1.18
MCF2L-216ENST00000439475 ARL6Q9H0F7 186 aa7.68□□□□□ -1.18
MCF2L-216ENST00000439475 ARV1Q9H2C2 271 aa7.68□□□□□ -1.18
MCF2L-216ENST00000439475 RPRMQ9NS64 109 aa7.68□□□□□ -1.18
MCF2L-216ENST00000439475 LYRM2Q9NU23 88 aaPredicted RBP7.68□□□□□ -1.18
MCF2L-216ENST00000439475 UQCC1Q9NVA1 299 aa7.68□□□□□ -1.18
MCF2L-216ENST00000439475 DOK5Q9P104 306 aa7.68□□□□□ -1.18
MCF2L-216ENST00000439475 AGRNO00468 2067 aa7.67□□□□□ -1.18
MCF2L-216ENST00000439475 ELOA3CA0A087WX78 387 aaPredicted RBP7.67□□□□□ -1.18
MCF2L-216ENST00000439475 E5RGE8 158 aa7.67□□□□□ -1.18
MCF2L-216ENST00000439475 H3BRN7 92 aa7.67□□□□□ -1.18
MCF2L-216ENST00000439475 AGPAT2O15120 278 aa7.67□□□□□ -1.18
MCF2L-216ENST00000439475 SSNA1O43805 119 aa7.67□□□□□ -1.18
MCF2L-216ENST00000439475 CAMLGP49069 296 aa7.67□□□□□ -1.18
MCF2L-216ENST00000439475 FGL1Q08830 312 aa7.67□□□□□ -1.18
MCF2L-216ENST00000439475 ARL16Q0P5N6 197 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms