RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 ZNF835Q9Y2P0 537 aa12.28□□□□□ -0.44
APP-208ENST00000439274 ETFRF1Q6IPR1 90 aa12.28□□□□□ -0.44
APP-208ENST00000439274 SSX8Q7RTT4 187 aa12.28□□□□□ -0.44
APP-208ENST00000439274 TMEM133Q9H2Q1 129 aa12.28□□□□□ -0.44
APP-208ENST00000439274 DYNLRB1Q9NP97 96 aa12.28□□□□□ -0.44
APP-208ENST00000439274 LGALS7P47929 136 aa12.27□□□□□ -0.45
APP-208ENST00000439274 GAGE1Q13065 139 aa12.27□□□□□ -0.45
APP-208ENST00000439274 LAMTOR2Q9Y2Q5 125 aa12.27□□□□□ -0.45
APP-208ENST00000439274 MALRD1Q5VYJ5 2156 aa12.27□□□□□ -0.45
APP-208ENST00000439274 C2orf70A6NJV1 201 aa12.27□□□□□ -0.45
APP-208ENST00000439274 PRRG2O14669 202 aa12.27□□□□□ -0.45
APP-208ENST00000439274 TCRAP04437 139 aa12.27□□□□□ -0.45
APP-208ENST00000439274 HBBP68871 147 aa12.27□□□□□ -0.45
APP-208ENST00000439274 TMEM116Q8NCL8 245 aa12.27□□□□□ -0.45
APP-208ENST00000439274 OR8B3Q8NGG8 313 aa12.27□□□□□ -0.45
APP-208ENST00000439274 C22orf15Q8WYQ4 148 aa12.27□□□□□ -0.45
APP-208ENST00000439274 OR8B2Q96RD0 313 aa12.27□□□□□ -0.45
APP-208ENST00000439274 APC2O95996 2303 aa12.26□□□□□ -0.45
APP-208ENST00000439274 NDUFB8O95169 186 aa12.26□□□□□ -0.45
APP-208ENST00000439274 TOMM40O96008 361 aa12.26□□□□□ -0.45
APP-208ENST00000439274 LTAP01374 205 aa12.26□□□□□ -0.45
APP-208ENST00000439274 P01737 135 aa12.26□□□□□ -0.45
APP-208ENST00000439274 BTF3P20290 206 aaKnown RBP12.26□□□□□ -0.45
APP-208ENST00000439274 CA7P43166 264 aa12.26□□□□□ -0.45
APP-208ENST00000439274 LYZP61626 148 aa12.26□□□□□ -0.45
APP-208ENST00000439274 ATP5L2Q7Z4Y8 100 aa12.26□□□□□ -0.45
APP-208ENST00000439274 C5orf17Q8NAS9 161 aa12.26□□□□□ -0.45
APP-208ENST00000439274 PRSS22Q9GZN4 317 aa12.26□□□□□ -0.45
APP-208ENST00000439274 TP73-AS1Q9UF72 201 aa12.26□□□□□ -0.45
APP-208ENST00000439274 TPRP12270 2363 aaKnown RBP12.26□□□□□ -0.45
APP-208ENST00000439274 C19orf71A6NCJ1 209 aa12.26□□□□□ -0.45
APP-208ENST00000439274 LYNX1G3V0Z9 82 aa12.26□□□□□ -0.45
APP-208ENST00000439274 LYNX1P0DP58 116 aa12.26□□□□□ -0.45
APP-208ENST00000439274 PVRIGQ6DKI7 326 aa12.26□□□□□ -0.45
APP-208ENST00000439274 TEX45Q8NA69 505 aa12.26□□□□□ -0.45
APP-208ENST00000439274 ASCL2Q99929 193 aa12.26□□□□□ -0.45
APP-208ENST00000439274 SIGLEC9Q9Y336 463 aa12.26□□□□□ -0.45
APP-208ENST00000439274 E7EQL1 145 aa12.25□□□□□ -0.45
APP-208ENST00000439274 CRYGBP07316 175 aa12.25□□□□□ -0.45
APP-208ENST00000439274 TSPOP30536 169 aa12.25□□□□□ -0.45
APP-208ENST00000439274 HINT1P49773 126 aaPredicted RBP12.25□□□□□ -0.45
APP-208ENST00000439274 LINC00173Q6ZV60 143 aa12.25□□□□□ -0.45
APP-208ENST00000439274 Q6ZVH6 145 aa12.25□□□□□ -0.45
APP-208ENST00000439274 EXOC3-AS1Q8N2X6 119 aa12.25□□□□□ -0.45
APP-208ENST00000439274 CIARTQ8N365 385 aaPredicted RBP12.25□□□□□ -0.45
APP-208ENST00000439274 KLHDC1Q8N7A1 406 aa12.25□□□□□ -0.45
APP-208ENST00000439274 FMC1Q96HJ9 113 aa12.25□□□□□ -0.45
APP-208ENST00000439274 SPTBN2O15020 2390 aa12.25□□□□□ -0.45
APP-208ENST00000439274 IGHV2-26A0A0B4J1V2 119 aa12.25□□□□□ -0.45
APP-208ENST00000439274 PSG1P11464 419 aa12.25□□□□□ -0.45
APP-208ENST00000439274 IGLL1P15814 213 aa12.25□□□□□ -0.45
APP-208ENST00000439274 FAM120AOSQ5T036 256 aa12.25□□□□□ -0.45
APP-208ENST00000439274 C8orf46Q8TAG6 207 aa12.25□□□□□ -0.45
APP-208ENST00000439274 SCNM1Q9BWG6 230 aa12.25□□□□□ -0.45
APP-208ENST00000439274 FBXL15Q9H469 300 aa12.25□□□□□ -0.45
APP-208ENST00000439274 CSMD1Q96PZ7 3565 aa12.24□□□□□ -0.45
APP-208ENST00000439274 A8MWL6 223 aa12.24□□□□□ -0.45
APP-208ENST00000439274 TEX22C9J3V5 150 aa12.24□□□□□ -0.45
APP-208ENST00000439274 KAAG1Q9UBP8 84 aa12.24□□□□□ -0.45
APP-208ENST00000439274 ZFP30Q9Y2G7 519 aa12.24□□□□□ -0.45
APP-208ENST00000439274 POLEQ07864 2286 aa12.24□□□□□ -0.45
APP-208ENST00000439274 TRAV9-2A0A087WT02 112 aa12.24□□□□□ -0.45
APP-208ENST00000439274 SHISA9B4DS77 424 aa12.24□□□□□ -0.45
APP-208ENST00000439274 COX7A1P24310 79 aa12.24□□□□□ -0.45
APP-208ENST00000439274 DMRTA1Q5VZB9 504 aa12.24□□□□□ -0.45
APP-208ENST00000439274 HIGD1AQ9Y241 93 aa12.24□□□□□ -0.45
APP-208ENST00000439274 INSIG2Q9Y5U4 225 aa12.24□□□□□ -0.45
APP-208ENST00000439274 IGHV1-3A0A0C4DH29 117 aa12.23□□□□□ -0.45
APP-208ENST00000439274 SIAH2O43255 324 aa12.23□□□□□ -0.45
APP-208ENST00000439274 DAZAP1Q96EP5 407 aaKnown RBP12.23□□□□□ -0.45
APP-208ENST00000439274 SMIM12Q96EX1 92 aa12.23□□□□□ -0.45
APP-208ENST00000439274 ABHD17AQ96GS6 310 aa12.23□□□□□ -0.45
APP-208ENST00000439274 F11RQ9Y624 299 aaKnown RBP12.23□□□□□ -0.45
APP-208ENST00000439274 IGHV1-69-2A0A0G2JMI3 117 aa12.22□□□□□ -0.45
APP-208ENST00000439274 IGLC1P0CG04 106 aa12.22□□□□□ -0.45
APP-208ENST00000439274 GFRALQ6UXV0 394 aa12.22□□□□□ -0.45
APP-208ENST00000439274 GOLT1AQ6ZVE7 132 aa12.22□□□□□ -0.45
APP-208ENST00000439274 PRNTQ86SH4 94 aa12.22□□□□□ -0.45
APP-208ENST00000439274 Q86TA4 180 aa12.22□□□□□ -0.45
APP-208ENST00000439274 PPP1R27Q86WC6 154 aa12.22□□□□□ -0.45
APP-208ENST00000439274 IGHV1-24A0A0C4DH33 117 aa12.22□□□□□ -0.45
APP-208ENST00000439274 IGLV1-47P01700 117 aa12.22□□□□□ -0.45
APP-208ENST00000439274 RBP4P02753 201 aa12.22□□□□□ -0.45
APP-208ENST00000439274 ZNF138P52744 262 aa12.22□□□□□ -0.45
APP-208ENST00000439274 IGFBPL1Q8WX77 278 aa12.22□□□□□ -0.45
APP-208ENST00000439274 SLC25A39Q9BZJ4 359 aaPredicted RBP12.22□□□□□ -0.45
APP-208ENST00000439274 ZNF492Q9P255 531 aa12.22□□□□□ -0.45
APP-208ENST00000439274 PTPRZ1P23471 2315 aaPredicted RBP12.22□□□□□ -0.45
APP-208ENST00000439274 PRR30Q53SZ7 412 aaPredicted RBP12.21□□□□□ -0.45
APP-208ENST00000439274 RBPMS2Q6ZRY4 209 aaKnown RBP12.21□□□□□ -0.45
APP-208ENST00000439274 JKAMPQ9P055 326 aa12.21□□□□□ -0.45
APP-208ENST00000439274 LRBAP50851 2863 aa12.21□□□□□ -0.45
APP-208ENST00000439274 BUB1B-PAK6H3BSN5 160 aa12.21□□□□□ -0.45
APP-208ENST00000439274 IGLV2-11P01706 119 aa12.21□□□□□ -0.45
APP-208ENST00000439274 COL8A1P27658 744 aa12.21□□□□□ -0.45
APP-208ENST00000439274 PLP1P60201 277 aa12.21□□□□□ -0.45
APP-208ENST00000439274 CT83Q5H943 113 aa12.21□□□□□ -0.45
APP-208ENST00000439274 SRSF12Q8WXF0 261 aaKnown RBP12.21□□□□□ -0.45
APP-208ENST00000439274 C17orf77Q96MU5 243 aa12.21□□□□□ -0.45
APP-208ENST00000439274 TMEM70Q9BUB7 260 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms