RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 GRAMD2BQ96HH9 432 aa13.99□□□□□ -0.17
HDAC6-208ENST00000438518 CYTL1Q9NRR1 136 aa13.99□□□□□ -0.17
HDAC6-208ENST00000438518 TECRQ9NZ01 308 aaKnown RBP13.99□□□□□ -0.17
HDAC6-208ENST00000438518 SMPXQ9UHP9 88 aa13.99□□□□□ -0.17
HDAC6-208ENST00000438518 WIPF1O43516 503 aa13.98□□□□□ -0.17
HDAC6-208ENST00000438518 ORM2P19652 201 aa13.98□□□□□ -0.17
HDAC6-208ENST00000438518 SERF2P84101 59 aa13.98□□□□□ -0.17
HDAC6-208ENST00000438518 IL34Q6ZMJ4 242 aa13.98□□□□□ -0.17
HDAC6-208ENST00000438518 C9orf62Q8N4C0 152 aa13.98□□□□□ -0.17
HDAC6-208ENST00000438518 OR2K2Q8NGT1 345 aa13.98□□□□□ -0.17
HDAC6-208ENST00000438518 OR2G3Q8NGZ4 309 aa13.98□□□□□ -0.17
HDAC6-208ENST00000438518 GATAD1Q8WUU5 269 aa13.98□□□□□ -0.17
HDAC6-208ENST00000438518 PPP1R14BQ96C90 147 aa13.98□□□□□ -0.17
HDAC6-208ENST00000438518 VSIRQ9H7M9 311 aa13.98□□□□□ -0.17
HDAC6-208ENST00000438518 HIGD1AQ9Y241 93 aa13.98□□□□□ -0.17
HDAC6-208ENST00000438518 U3KQE9 123 aa13.98□□□□□ -0.17
HDAC6-208ENST00000438518 COX7A2P2O60397 106 aa13.97□□□□□ -0.17
HDAC6-208ENST00000438518 SAP30O75446 220 aa13.97□□□□□ -0.17
HDAC6-208ENST00000438518 ATP6V0CP27449 155 aa13.97□□□□□ -0.17
HDAC6-208ENST00000438518 HSD17B11Q8NBQ5 300 aa13.97□□□□□ -0.17
HDAC6-208ENST00000438518 OR1B1Q8NGR6 318 aa13.97□□□□□ -0.17
HDAC6-208ENST00000438518 DYNLRB2Q8TF09 96 aa13.97□□□□□ -0.17
HDAC6-208ENST00000438518 RNF2Q99496 336 aa13.97□□□□□ -0.17
HDAC6-208ENST00000438518 RSG1Q9BU20 258 aa13.97□□□□□ -0.17
HDAC6-208ENST00000438518 ZNF471Q9BX82 626 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-208ENST00000438518 ARV1Q9H2C2 271 aa13.97□□□□□ -0.17
HDAC6-208ENST00000438518 IGHV3OR16-8A0A075B7F1 116 aa13.96□□□□□ -0.17
HDAC6-208ENST00000438518 MBP02144 154 aa13.96□□□□□ -0.17
HDAC6-208ENST00000438518 OR5G3P0C626 314 aa13.96□□□□□ -0.17
HDAC6-208ENST00000438518 TPT1P13693 172 aaKnown RBP13.96□□□□□ -0.17
HDAC6-208ENST00000438518 C1orf194Q5T5A4 169 aa13.96□□□□□ -0.17
HDAC6-208ENST00000438518 STOML3Q8TAV4 291 aa13.96□□□□□ -0.17
HDAC6-208ENST00000438518 DNAJC4Q9NNZ3 241 aa13.96□□□□□ -0.17
HDAC6-208ENST00000438518 ZMAT5Q9UDW3 170 aaKnown RBP13.96□□□□□ -0.17
HDAC6-208ENST00000438518 CHEK1O14757 476 aa13.95□□□□□ -0.18
HDAC6-208ENST00000438518 ZNF207O43670 478 aaKnown RBP13.95□□□□□ -0.18
HDAC6-208ENST00000438518 BUB3O43684 328 aa13.95□□□□□ -0.18
HDAC6-208ENST00000438518 IGLV1-51P01701 117 aa13.95□□□□□ -0.18
HDAC6-208ENST00000438518 C10orf113Q5VZT2 155 aa13.95□□□□□ -0.18
HDAC6-208ENST00000438518 LAMTOR1Q6IAA8 161 aa13.95□□□□□ -0.18
HDAC6-208ENST00000438518 SLC51BQ86UW2 128 aa13.95□□□□□ -0.18
HDAC6-208ENST00000438518 RHPN1-AS1Q9BWJ2 59 aa13.95□□□□□ -0.18
HDAC6-208ENST00000438518 WNK1Q9H4A3 2382 aa13.95□□□□□ -0.18
HDAC6-208ENST00000438518 DNHD1Q96M86 4753 aa13.94□□□□□ -0.18
HDAC6-208ENST00000438518 TRAV25A0A0B4J276 109 aa13.94□□□□□ -0.18
HDAC6-208ENST00000438518 H3BRN7 92 aa13.94□□□□□ -0.18
HDAC6-208ENST00000438518 ACOT6Q3I5F7 207 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-208ENST00000438518 FFAR4Q5NUL3 377 aa13.94□□□□□ -0.18
HDAC6-208ENST00000438518 EIF5AL1Q6IS14 154 aaKnown RBP13.94□□□□□ -0.18
HDAC6-208ENST00000438518 ADAMTSL5Q6ZMM2 481 aa13.94□□□□□ -0.18
HDAC6-208ENST00000438518 BAP18Q8IXM2 172 aa13.94□□□□□ -0.18
HDAC6-208ENST00000438518 TMEM37Q8WXS4 190 aa13.94□□□□□ -0.18
HDAC6-208ENST00000438518 GPR82Q96P67 336 aa13.94□□□□□ -0.18
HDAC6-208ENST00000438518 SHANK2-AS3Q9BTD1 123 aa13.94□□□□□ -0.18
HDAC6-208ENST00000438518 MRPL32Q9BYC8 188 aaKnown RBP13.94□□□□□ -0.18
HDAC6-208ENST00000438518 SLC25A39Q9BZJ4 359 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-208ENST00000438518 DOK5Q9P104 306 aa13.94□□□□□ -0.18
HDAC6-208ENST00000438518 HELTA6NFD8 242 aa13.93□□□□□ -0.18
HDAC6-208ENST00000438518 SEC11BP0C7V7 166 aa13.93□□□□□ -0.18
HDAC6-208ENST00000438518 SPP1P10451 314 aa13.93□□□□□ -0.18
HDAC6-208ENST00000438518 IGLL1P15814 213 aa13.93□□□□□ -0.18
HDAC6-208ENST00000438518 M6PRP20645 277 aa13.93□□□□□ -0.18
HDAC6-208ENST00000438518 DEFB114Q30KQ6 69 aa13.93□□□□□ -0.18
HDAC6-208ENST00000438518 LCN12Q6JVE5 192 aa13.93□□□□□ -0.18
HDAC6-208ENST00000438518 C16orf54Q6UWD8 224 aa13.93□□□□□ -0.18
HDAC6-208ENST00000438518 PATE2Q6UY27 113 aa13.93□□□□□ -0.18
HDAC6-208ENST00000438518 LINC00305Q7Z4B0 112 aa13.93□□□□□ -0.18
HDAC6-208ENST00000438518 ST8SIA2Q92186 375 aa13.93□□□□□ -0.18
HDAC6-208ENST00000438518 MLXQ9UH92 298 aa13.93□□□□□ -0.18
HDAC6-208ENST00000438518 ZNF98A6NK75 572 aa13.92□□□□□ -0.18
HDAC6-208ENST00000438518 SLC25A32Q9H2D1 315 aa13.92□□□□□ -0.18
HDAC6-208ENST00000438518 TRRAPQ9Y4A5 3859 aa13.91□□□□□ -0.18
HDAC6-208ENST00000438518 APOHP02749 345 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-208ENST00000438518 EDN2P20800 178 aa13.91□□□□□ -0.18
HDAC6-208ENST00000438518 RHOBP62745 196 aa13.91□□□□□ -0.18
HDAC6-208ENST00000438518 RBPMS2Q6ZRY4 209 aaKnown RBP13.91□□□□□ -0.18
HDAC6-208ENST00000438518 GLMPQ8WWB7 406 aa13.91□□□□□ -0.18
HDAC6-208ENST00000438518 VWFP04275 2813 aa13.91□□□□□ -0.18
HDAC6-208ENST00000438518 UMAD1C9J7I0 102 aa13.9□□□□□ -0.18
HDAC6-208ENST00000438518 RPL7P18124 248 aaKnown RBP13.9□□□□□ -0.18
HDAC6-208ENST00000438518 FAM78BQ5VT40 261 aa13.9□□□□□ -0.18
HDAC6-208ENST00000438518 FAM90A2PQ658T7 463 aa13.9□□□□□ -0.18
HDAC6-208ENST00000438518 OR8I2Q8N0Y5 310 aa13.9□□□□□ -0.18
HDAC6-208ENST00000438518 UHRF2Q96PU4 802 aa13.9□□□□□ -0.18
HDAC6-208ENST00000438518 SH3BGRL3Q9H299 93 aa13.9□□□□□ -0.18
HDAC6-208ENST00000438518 IGHV3-49A0A0A0MS15 119 aa13.89□□□□□ -0.19
HDAC6-208ENST00000438518 TRAV2A0A0B4J234 112 aa13.89□□□□□ -0.19
HDAC6-208ENST00000438518 TSPAN4O14817 238 aa13.89□□□□□ -0.19
HDAC6-208ENST00000438518 GALR1P47211 349 aa13.89□□□□□ -0.19
HDAC6-208ENST00000438518 MEOX2P50222 304 aa13.89□□□□□ -0.19
HDAC6-208ENST00000438518 NKX2-5P52952 324 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-208ENST00000438518 PAFAH1B2P68402 229 aa13.89□□□□□ -0.19
HDAC6-208ENST00000438518 CD300EQ496F6 205 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-208ENST00000438518 SAMD5Q5TGI4 173 aa13.89□□□□□ -0.19
HDAC6-208ENST00000438518 SAMD13Q5VXD3 122 aa13.89□□□□□ -0.19
HDAC6-208ENST00000438518 SIGLEC15Q6ZMC9 328 aa13.89□□□□□ -0.19
HDAC6-208ENST00000438518 TCF24Q7RTU0 167 aa13.89□□□□□ -0.19
HDAC6-208ENST00000438518 BPIFA4PQ86YQ2 179 aa13.89□□□□□ -0.19
HDAC6-208ENST00000438518 STXBP6Q8NFX7 210 aa13.89□□□□□ -0.19
HDAC6-208ENST00000438518 PHYHIPLQ96FC7 376 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms