RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 ZNF546Q86UE3 836 aa13.88□□□□□ -0.19
DDR1-236ENST00000431373 PPP1R14BQ96C90 147 aa13.88□□□□□ -0.19
DDR1-236ENST00000431373 MS4A6AQ9H2W1 248 aa13.88□□□□□ -0.19
DDR1-236ENST00000431373 TRAV2A0A0B4J234 112 aa13.87□□□□□ -0.19
DDR1-236ENST00000431373 UBE2L5PA0A1B0GUS4 154 aa13.87□□□□□ -0.19
DDR1-236ENST00000431373 LINC00869P0C866 280 aa13.87□□□□□ -0.19
DDR1-236ENST00000431373 RAB31Q13636 194 aa13.87□□□□□ -0.19
DDR1-236ENST00000431373 WFDC3Q8IUB2 231 aa13.87□□□□□ -0.19
DDR1-236ENST00000431373 STPG3Q8N7X2 389 aa13.87□□□□□ -0.19
DDR1-236ENST00000431373 STXBP6Q8NFX7 210 aa13.87□□□□□ -0.19
DDR1-236ENST00000431373 OR5C1Q8NGR4 320 aa13.87□□□□□ -0.19
DDR1-236ENST00000431373 OR1B1Q8NGR6 318 aa13.87□□□□□ -0.19
DDR1-236ENST00000431373 THAP6Q8TBB0 222 aa13.87□□□□□ -0.19
DDR1-236ENST00000431373 ASB13Q8WXK3 278 aa13.87□□□□□ -0.19
DDR1-236ENST00000431373 MGST2Q99735 147 aa13.87□□□□□ -0.19
DDR1-236ENST00000431373 UBQLN2Q9UHD9 624 aa13.87□□□□□ -0.19
DDR1-236ENST00000431373 WDR83OSQ9Y284 106 aa13.87□□□□□ -0.19
DDR1-236ENST00000431373 GIPP09681 153 aaPredicted RBP13.86□□□□□ -0.19
DDR1-236ENST00000431373 LYL1P12980 280 aa13.86□□□□□ -0.19
DDR1-236ENST00000431373 S100A7P31151 101 aa13.86□□□□□ -0.19
DDR1-236ENST00000431373 AP2S1P53680 142 aaPredicted RBP13.86□□□□□ -0.19
DDR1-236ENST00000431373 PLP1P60201 277 aa13.86□□□□□ -0.19
DDR1-236ENST00000431373 ODF3L2Q3SX64 289 aa13.86□□□□□ -0.19
DDR1-236ENST00000431373 C1orf194Q5T5A4 169 aa13.86□□□□□ -0.19
DDR1-236ENST00000431373 SIGLEC15Q6ZMC9 328 aa13.86□□□□□ -0.19
DDR1-236ENST00000431373 FAM110AQ9BQ89 295 aa13.86□□□□□ -0.19
DDR1-236ENST00000431373 SRD5A3Q9H8P0 318 aa13.86□□□□□ -0.19
DDR1-236ENST00000431373 DOK5Q9P104 306 aa13.86□□□□□ -0.19
DDR1-236ENST00000431373 FBXL17Q9UF56 701 aa13.86□□□□□ -0.19
DDR1-236ENST00000431373 HYPMO75409 117 aa13.85□□□□□ -0.19
DDR1-236ENST00000431373 CAMLGP49069 296 aa13.85□□□□□ -0.19
DDR1-236ENST00000431373 CMC4P56277 68 aaPredicted RBP13.85□□□□□ -0.19
DDR1-236ENST00000431373 HSPB11Q9Y547 144 aa13.85□□□□□ -0.19
DDR1-236ENST00000431373 K7EQG2 157 aa13.84□□□□□ -0.19
DDR1-236ENST00000431373 FGF7P21781 194 aa13.84□□□□□ -0.19
DDR1-236ENST00000431373 RPL12P30050 165 aaKnown RBP13.84□□□□□ -0.19
DDR1-236ENST00000431373 RAP2BP61225 183 aa13.84□□□□□ -0.19
DDR1-236ENST00000431373 FGL1Q08830 312 aa13.84□□□□□ -0.19
DDR1-236ENST00000431373 PXDC1Q5TGL8 231 aa13.84□□□□□ -0.19
DDR1-236ENST00000431373 ASCL2Q99929 193 aa13.84□□□□□ -0.19
DDR1-236ENST00000431373 GGTLC1Q9BX51 225 aa13.84□□□□□ -0.19
DDR1-236ENST00000431373 ARL6Q9H0F7 186 aa13.84□□□□□ -0.19
DDR1-236ENST00000431373 HIGD1AQ9Y241 93 aa13.84□□□□□ -0.19
DDR1-236ENST00000431373 ZNF98A6NK75 572 aa13.83□□□□□ -0.2
DDR1-236ENST00000431373 OR5G3P0C626 314 aa13.83□□□□□ -0.2
DDR1-236ENST00000431373 CLINT1Q14677 625 aa13.83□□□□□ -0.2
DDR1-236ENST00000431373 S100A7AQ86SG5 101 aa13.83□□□□□ -0.2
DDR1-236ENST00000431373 SBSPONQ8IVN8 264 aa13.83□□□□□ -0.2
DDR1-236ENST00000431373 OR8I2Q8N0Y5 310 aa13.83□□□□□ -0.2
DDR1-236ENST00000431373 DCANP1Q8TF63 244 aa13.83□□□□□ -0.2
DDR1-236ENST00000431373 MAP6D1Q9H9H5 199 aa13.83□□□□□ -0.2
DDR1-236ENST00000431373 H3BRN7 92 aa13.82□□□□□ -0.2
DDR1-236ENST00000431373 MPDU1O75352 247 aa13.82□□□□□ -0.2
DDR1-236ENST00000431373 NHLRC4P0CG21 123 aaPredicted RBP13.82□□□□□ -0.2
DDR1-236ENST00000431373 OPCMLQ14982 345 aa13.82□□□□□ -0.2
DDR1-236ENST00000431373 MIC13Q5XKP0 118 aa13.82□□□□□ -0.2
DDR1-236ENST00000431373 CHAC2Q8WUX2 184 aa13.82□□□□□ -0.2
DDR1-236ENST00000431373 SLC25A39Q9BZJ4 359 aaPredicted RBP13.82□□□□□ -0.2
DDR1-236ENST00000431373 SLC25A22Q9H936 323 aa13.82□□□□□ -0.2
DDR1-236ENST00000431373 NRN1Q9NPD7 142 aa13.82□□□□□ -0.2
DDR1-236ENST00000431373 COL7A1Q02388 2944 aa13.82□□□□□ -0.2
DDR1-236ENST00000431373 RBMY1BA6NDE4 496 aaKnown RBP13.81□□□□□ -0.2
DDR1-236ENST00000431373 RBMY1EA6NEQ0 496 aaKnown RBP13.81□□□□□ -0.2
DDR1-236ENST00000431373 RBMY1DP0C7P1 496 aaKnown RBP13.81□□□□□ -0.2
DDR1-236ENST00000431373 RPL29P47914 159 aaKnown RBP13.81□□□□□ -0.2
DDR1-236ENST00000431373 PRR20EP86478 221 aa13.81□□□□□ -0.2
DDR1-236ENST00000431373 PRR20CP86479 221 aa13.81□□□□□ -0.2
DDR1-236ENST00000431373 PRR20DP86480 221 aa13.81□□□□□ -0.2
DDR1-236ENST00000431373 PRR20BP86481 221 aa13.81□□□□□ -0.2
DDR1-236ENST00000431373 PRR20AP86496 221 aa13.81□□□□□ -0.2
DDR1-236ENST00000431373 PATE2Q6UY27 113 aa13.81□□□□□ -0.2
DDR1-236ENST00000431373 LINC00322Q6ZN03 302 aaPredicted RBP13.81□□□□□ -0.2
DDR1-236ENST00000431373 FAM24BQ8N5W8 94 aa13.81□□□□□ -0.2
DDR1-236ENST00000431373 CITED4Q96RK1 184 aa13.81□□□□□ -0.2
DDR1-236ENST00000431373 ATP5SQ99766 215 aa13.81□□□□□ -0.2
DDR1-236ENST00000431373 SHANK2-AS3Q9BTD1 123 aa13.81□□□□□ -0.2
DDR1-236ENST00000431373 SCRT1Q9BWW7 348 aa13.81□□□□□ -0.2
DDR1-236ENST00000431373 ARV1Q9H2C2 271 aa13.81□□□□□ -0.2
DDR1-236ENST00000431373 COX7A2P2O60397 106 aa13.8□□□□□ -0.2
DDR1-236ENST00000431373 LEMD1Q68G75 181 aa13.8□□□□□ -0.2
DDR1-236ENST00000431373 Q6ZRG5 221 aa13.8□□□□□ -0.2
DDR1-236ENST00000431373 APRG1Q8IVJ8 170 aa13.8□□□□□ -0.2
DDR1-236ENST00000431373 GPR82Q96P67 336 aa13.8□□□□□ -0.2
DDR1-236ENST00000431373 UHRF2Q96PU4 802 aa13.8□□□□□ -0.2
DDR1-236ENST00000431373 SLC25A32Q9H2D1 315 aa13.8□□□□□ -0.2
DDR1-236ENST00000431373 ELOA3CA0A087WX78 387 aaPredicted RBP13.79□□□□□ -0.2
DDR1-236ENST00000431373 ZNF688P0C7X2 276 aa13.79□□□□□ -0.2
DDR1-236ENST00000431373 GALR1P47211 349 aa13.79□□□□□ -0.2
DDR1-236ENST00000431373 DEFB131AP59861 70 aa13.79□□□□□ -0.2
DDR1-236ENST00000431373 B2MP61769 119 aa13.79□□□□□ -0.2
DDR1-236ENST00000431373 HAGHQ16775 308 aa13.79□□□□□ -0.2
DDR1-236ENST00000431373 Q5BKY6 102 aa13.79□□□□□ -0.2
DDR1-236ENST00000431373 OR2T35Q8NGX2 323 aa13.79□□□□□ -0.2
DDR1-236ENST00000431373 NPCDR1Q9BY65 106 aa13.79□□□□□ -0.2
DDR1-236ENST00000431373 SMIM3Q9BZL3 60 aa13.79□□□□□ -0.2
DDR1-236ENST00000431373 WDR61Q9GZS3 305 aaKnown RBP13.79□□□□□ -0.2
DDR1-236ENST00000431373 SLC39A9Q9NUM3 307 aa13.79□□□□□ -0.2
DDR1-236ENST00000431373 RNF24Q9Y225 148 aa13.79□□□□□ -0.2
DDR1-236ENST00000431373 PXMP4Q9Y6I8 212 aa13.79□□□□□ -0.2
DDR1-236ENST00000431373 LOC102724200A0A096LPH7 203 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms