RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 OR51G1Q8NGK1 321 aa12.63□□□□□ -0.39
UBE3D-204ENST00000430071 GINS3Q9BRX5 216 aa12.63□□□□□ -0.39
UBE3D-204ENST00000430071 SACSQ9NZJ4 4579 aa12.62□□□□□ -0.39
UBE3D-204ENST00000430071 IGHV3OR16-13A0A075B7E8 117 aa12.62□□□□□ -0.39
UBE3D-204ENST00000430071 IGHV3-74A0A0B4J1X5 117 aa12.62□□□□□ -0.39
UBE3D-204ENST00000430071 UBE2L5PA0A1B0GUS4 154 aa12.62□□□□□ -0.39
UBE3D-204ENST00000430071 A0A1B0GVG6 124 aa12.62□□□□□ -0.39
UBE3D-204ENST00000430071 FABP1P07148 127 aa12.62□□□□□ -0.39
UBE3D-204ENST00000430071 CLINT1Q14677 625 aa12.62□□□□□ -0.39
UBE3D-204ENST00000430071 ATP6V1FQ16864 119 aa12.62□□□□□ -0.39
UBE3D-204ENST00000430071 RNF125Q96EQ8 232 aa12.62□□□□□ -0.39
UBE3D-204ENST00000430071 MGST2Q99735 147 aa12.62□□□□□ -0.39
UBE3D-204ENST00000430071 WDR83OSQ9Y284 106 aa12.62□□□□□ -0.39
UBE3D-204ENST00000430071 FXYD6-FXYD2A0A087WZ82 144 aa12.61□□□□□ -0.39
UBE3D-204ENST00000430071 CHEK1O14757 476 aa12.61□□□□□ -0.39
UBE3D-204ENST00000430071 CRYBB3P26998 211 aa12.61□□□□□ -0.39
UBE3D-204ENST00000430071 RHPN1-AS1Q9BWJ2 59 aa12.61□□□□□ -0.39
UBE3D-204ENST00000430071 IGHV3-66A0A0C4DH42 116 aa12.6□□□□□ -0.39
UBE3D-204ENST00000430071 AGPAT2O15120 278 aa12.6□□□□□ -0.39
UBE3D-204ENST00000430071 NPPCP23582 126 aa12.6□□□□□ -0.39
UBE3D-204ENST00000430071 LYZP61626 148 aa12.6□□□□□ -0.39
UBE3D-204ENST00000430071 ST8SIA2Q92186 375 aa12.6□□□□□ -0.39
UBE3D-204ENST00000430071 ST6GAL2Q96JF0 529 aa12.6□□□□□ -0.39
UBE3D-204ENST00000430071 AQP10Q96PS8 301 aa12.6□□□□□ -0.39
UBE3D-204ENST00000430071 METTL26Q96S19 204 aa12.6□□□□□ -0.39
UBE3D-204ENST00000430071 PBDC1Q9BVG4 233 aa12.6□□□□□ -0.39
UBE3D-204ENST00000430071 SMIM3Q9BZL3 60 aa12.6□□□□□ -0.39
UBE3D-204ENST00000430071 UBQLN2Q9UHD9 624 aa12.6□□□□□ -0.39
UBE3D-204ENST00000430071 SLC45A2Q9UMX9 530 aa12.6□□□□□ -0.39
UBE3D-204ENST00000430071 U3KQE9 123 aa12.6□□□□□ -0.39
UBE3D-204ENST00000430071 RNF222A6NCQ9 220 aa12.59□□□□□ -0.39
UBE3D-204ENST00000430071 SELENOTP62341 195 aa12.59□□□□□ -0.39
UBE3D-204ENST00000430071 ZNF546Q86UE3 836 aa12.59□□□□□ -0.39
UBE3D-204ENST00000430071 STPG3Q8N7X2 389 aa12.59□□□□□ -0.39
UBE3D-204ENST00000430071 BPIFCQ8NFQ6 507 aa12.59□□□□□ -0.39
UBE3D-204ENST00000430071 RNF2Q99496 336 aa12.59□□□□□ -0.39
UBE3D-204ENST00000430071 GGTLC1Q9BX51 225 aa12.59□□□□□ -0.39
UBE3D-204ENST00000430071 VSIRQ9H7M9 311 aa12.59□□□□□ -0.39
UBE3D-204ENST00000430071 WFDC1Q9HC57 220 aa12.59□□□□□ -0.39
UBE3D-204ENST00000430071 TNFSF18Q9UNG2 199 aa12.59□□□□□ -0.39
UBE3D-204ENST00000430071 HNRNPCP07910 306 aaKnown RBP eCLIP12.58□□□□□ -0.4
UBE3D-204ENST00000430071 FGF7P21781 194 aa12.58□□□□□ -0.4
UBE3D-204ENST00000430071 CAMLGP49069 296 aa12.58□□□□□ -0.4
UBE3D-204ENST00000430071 ATP5SQ99766 215 aa12.58□□□□□ -0.4
UBE3D-204ENST00000430071 FBXL17Q9UF56 701 aa12.58□□□□□ -0.4
UBE3D-204ENST00000430071 RABAC1Q9UI14 185 aa12.58□□□□□ -0.4
UBE3D-204ENST00000430071 TRAV25A0A0B4J276 109 aa12.57□□□□□ -0.4
UBE3D-204ENST00000430071 CFDP00746 253 aaPredicted RBP12.57□□□□□ -0.4
UBE3D-204ENST00000430071 LINC00869P0C866 280 aa12.57□□□□□ -0.4
UBE3D-204ENST00000430071 EIF2B2P49770 351 aaKnown RBP12.57□□□□□ -0.4
UBE3D-204ENST00000430071 RBPMS2Q6ZRY4 209 aaKnown RBP12.57□□□□□ -0.4
UBE3D-204ENST00000430071 OR11H4Q8NGC9 324 aa12.57□□□□□ -0.4
UBE3D-204ENST00000430071 ORM2P19652 201 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 NUP62P37198 522 aaPredicted RBP12.56□□□□□ -0.4
UBE3D-204ENST00000430071 RAB31Q13636 194 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 OPCMLQ14982 345 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 ODF3L2Q3SX64 289 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 MIC13Q5XKP0 118 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 FAM90A2PQ658T7 463 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 WDR61Q9GZS3 305 aaKnown RBP12.56□□□□□ -0.4
UBE3D-204ENST00000430071 DOK5Q9P104 306 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 TSPAN4O14817 238 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 DFFBO76075 338 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 PLP1P60201 277 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 PRR20EP86478 221 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 PRR20CP86479 221 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 PRR20DP86480 221 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 PRR20BP86481 221 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 PRR20AP86496 221 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 PATE2Q6UY27 113 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 INO80EQ8NBZ0 244 aaPredicted RBP12.56□□□□□ -0.4
UBE3D-204ENST00000430071 OR1B1Q8NGR6 318 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 NPCDR1Q9BY65 106 aa12.56□□□□□ -0.4
UBE3D-204ENST00000430071 A0A1W2PS18 150 aa12.55□□□□□ -0.4
UBE3D-204ENST00000430071 ARPC5O15511 151 aa12.55□□□□□ -0.4
UBE3D-204ENST00000430071 BUB3O43684 328 aa12.55□□□□□ -0.4
UBE3D-204ENST00000430071 MPDU1O75352 247 aa12.55□□□□□ -0.4
UBE3D-204ENST00000430071 BMI1P35226 326 aa12.55□□□□□ -0.4
UBE3D-204ENST00000430071 RPL29P47914 159 aaKnown RBP12.55□□□□□ -0.4
UBE3D-204ENST00000430071 AP2S1P53680 142 aaPredicted RBP12.55□□□□□ -0.4
UBE3D-204ENST00000430071 ZNF124Q15973 351 aa12.55□□□□□ -0.4
UBE3D-204ENST00000430071 C16orf54Q6UWD8 224 aa12.55□□□□□ -0.4
UBE3D-204ENST00000430071 TCF24Q7RTU0 167 aa12.55□□□□□ -0.4
UBE3D-204ENST00000430071 GLMPQ8WWB7 406 aa12.55□□□□□ -0.4
UBE3D-204ENST00000430071 NARS2Q96I59 477 aaKnown RBP12.55□□□□□ -0.4
UBE3D-204ENST00000430071 OVOL2Q9BRP0 275 aa12.55□□□□□ -0.4
UBE3D-204ENST00000430071 ARL6Q9H0F7 186 aa12.55□□□□□ -0.4
UBE3D-204ENST00000430071 TMEM231Q9H6L2 316 aa12.55□□□□□ -0.4
UBE3D-204ENST00000430071 HYPMO75409 117 aa12.54□□□□□ -0.4
UBE3D-204ENST00000430071 LAMTOR1Q6IAA8 161 aa12.54□□□□□ -0.4
UBE3D-204ENST00000430071 TCTE3Q8IZS6 198 aa12.54□□□□□ -0.4
UBE3D-204ENST00000430071 SPAG8Q99932 426 aaPredicted RBP12.54□□□□□ -0.4
UBE3D-204ENST00000430071 PXMP4Q9Y6I8 212 aa12.54□□□□□ -0.4
UBE3D-204ENST00000430071 IGKV3-7A0A075B6H7 116 aa12.53□□□□□ -0.4
UBE3D-204ENST00000430071 LOC102724200A0A096LPH7 203 aaPredicted RBP12.53□□□□□ -0.4
UBE3D-204ENST00000430071 IFNA5P01569 189 aa12.53□□□□□ -0.4
UBE3D-204ENST00000430071 OR5G3P0C626 314 aa12.53□□□□□ -0.4
UBE3D-204ENST00000430071 AKAP14Q86UN6 197 aa12.53□□□□□ -0.4
UBE3D-204ENST00000430071 GRAMD2BQ96HH9 432 aa12.53□□□□□ -0.4
UBE3D-204ENST00000430071 UHRF2Q96PU4 802 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms