RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 EIF3GO75821 320 aaKnown RBP eCLIP9.81□□□□□ -0.84
HMGB3P4-201ENST00000428776 IFNA1P01562 189 aa9.81□□□□□ -0.84
HMGB3P4-201ENST00000428776 ARL14EPLP0DKL9 152 aa9.81□□□□□ -0.84
HMGB3P4-201ENST00000428776 GUK1Q16774 197 aa9.81□□□□□ -0.84
HMGB3P4-201ENST00000428776 TOMM20LQ6UXN7 152 aa9.81□□□□□ -0.84
HMGB3P4-201ENST00000428776 STXBP6Q8NFX7 210 aa9.81□□□□□ -0.84
HMGB3P4-201ENST00000428776 OR4F5Q8NH21 305 aa9.81□□□□□ -0.84
HMGB3P4-201ENST00000428776 WIPF2Q8TF74 440 aaPredicted RBP9.81□□□□□ -0.84
HMGB3P4-201ENST00000428776 ZNF414Q96IQ9 312 aa9.81□□□□□ -0.84
HMGB3P4-201ENST00000428776 SLC25A39Q9BZJ4 359 aaPredicted RBP9.81□□□□□ -0.84
HMGB3P4-201ENST00000428776 ZFAND3Q9H8U3 227 aa9.81□□□□□ -0.84
HMGB3P4-201ENST00000428776 RNF24Q9Y225 148 aa9.81□□□□□ -0.84
HMGB3P4-201ENST00000428776 NDUFA4O00483 81 aa9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 GGCTO75223 188 aaKnown RBP9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 ATP6V1G1O75348 118 aa9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 LGALS1P09382 135 aaKnown RBP9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 GCHFRP30047 84 aa9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 TAGLN2P37802 199 aaKnown RBP9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 CDX1P47902 265 aaPredicted RBP9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 PEA15Q15121 130 aa9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 USF2Q15853 346 aaPredicted RBP9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 MORN5Q5VZ52 161 aa9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 WFDC12Q8WWY7 111 aa9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 FAM167A-AS1Q96KT0 104 aa9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 SHANK2-AS3Q9BTD1 123 aa9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 SCRT1Q9BWW7 348 aa9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 SLC25A2Q9BXI2 301 aa9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 EIF5A2Q9GZV4 153 aaKnown RBP9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 TMPRSS5Q9H3S3 457 aa9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 SMDT1Q9H4I9 107 aa9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 MANBALQ9NQG1 85 aa9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 GNG13Q9P2W3 67 aa9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 RABAC1Q9UI14 185 aa9.8□□□□□ -0.84
HMGB3P4-201ENST00000428776 TRAV5A0A0B4J249 113 aa9.79□□□□□ -0.84
HMGB3P4-201ENST00000428776 IGHV3-35A0A0C4DH35 117 aa9.79□□□□□ -0.84
HMGB3P4-201ENST00000428776 H3BRN7 92 aa9.79□□□□□ -0.84
HMGB3P4-201ENST00000428776 OR7C2O60412 319 aa9.79□□□□□ -0.84
HMGB3P4-201ENST00000428776 TRBV12-3P01733 135 aa9.79□□□□□ -0.84
HMGB3P4-201ENST00000428776 CD5P06127 495 aa9.79□□□□□ -0.84
HMGB3P4-201ENST00000428776 HAGHQ16775 308 aa9.79□□□□□ -0.84
HMGB3P4-201ENST00000428776 TOR2AQ5JU69 321 aa9.79□□□□□ -0.84
HMGB3P4-201ENST00000428776 ZNF506Q5JVG8 444 aa9.79□□□□□ -0.84
HMGB3P4-201ENST00000428776 IQCF2Q8IXL9 164 aa9.79□□□□□ -0.84
HMGB3P4-201ENST00000428776 TMEM167BQ9NRX6 74 aa9.79□□□□□ -0.84
HMGB3P4-201ENST00000428776 LOC102723971A0A1B0GUV8 181 aa9.78□□□□□ -0.84
HMGB3P4-201ENST00000428776 CLPSL1A2RUU4 121 aa9.78□□□□□ -0.84
HMGB3P4-201ENST00000428776 BCL2P10415 239 aa9.78□□□□□ -0.84
HMGB3P4-201ENST00000428776 TCTEX1D4Q5JR98 221 aa9.78□□□□□ -0.84
HMGB3P4-201ENST00000428776 GPHB5Q86YW7 130 aa9.78□□□□□ -0.84
HMGB3P4-201ENST00000428776 SUN5Q8TC36 379 aa9.78□□□□□ -0.84
HMGB3P4-201ENST00000428776 ZNF503Q96F45 646 aa9.78□□□□□ -0.84
HMGB3P4-201ENST00000428776 OR5B12Q96R08 314 aa9.78□□□□□ -0.84
HMGB3P4-201ENST00000428776 RARRES2Q99969 163 aa9.78□□□□□ -0.84
HMGB3P4-201ENST00000428776 PAXXQ9BUH6 204 aa9.78□□□□□ -0.84
HMGB3P4-201ENST00000428776 OR51M1Q9H341 326 aa9.78□□□□□ -0.84
HMGB3P4-201ENST00000428776 TREM1Q9NP99 234 aa9.78□□□□□ -0.84
HMGB3P4-201ENST00000428776 TMEM14CQ9P0S9 112 aa9.78□□□□□ -0.84
HMGB3P4-201ENST00000428776 VAX2Q9UIW0 290 aa9.78□□□□□ -0.84
HMGB3P4-201ENST00000428776 RNF114Q9Y508 228 aa9.78□□□□□ -0.84
HMGB3P4-201ENST00000428776 ZNF98A6NK75 572 aa9.77□□□□□ -0.85
HMGB3P4-201ENST00000428776 I3L521 148 aa9.77□□□□□ -0.85
HMGB3P4-201ENST00000428776 HSPB1P04792 205 aaKnown RBP9.77□□□□□ -0.85
HMGB3P4-201ENST00000428776 S100A1P23297 94 aa9.77□□□□□ -0.85
HMGB3P4-201ENST00000428776 NPPCP23582 126 aa9.77□□□□□ -0.85
HMGB3P4-201ENST00000428776 SRSF3P84103 164 aaKnown RBP9.77□□□□□ -0.85
HMGB3P4-201ENST00000428776 ICAM4Q14773 271 aa9.77□□□□□ -0.85
HMGB3P4-201ENST00000428776 FAM106AQ4KMX7 169 aa9.77□□□□□ -0.85
HMGB3P4-201ENST00000428776 BPIFA4PQ86YQ2 179 aa9.77□□□□□ -0.85
HMGB3P4-201ENST00000428776 C4orf3Q8WVX3 66 aa9.77□□□□□ -0.85
HMGB3P4-201ENST00000428776 ARL2-SNX15V9GYD0 113 aa9.77□□□□□ -0.85
HMGB3P4-201ENST00000428776 A0A1B0GUS0 222 aa9.76□□□□□ -0.85
HMGB3P4-201ENST00000428776 PAGE4O60829 102 aa9.76□□□□□ -0.85
HMGB3P4-201ENST00000428776 NDUFS6O75380 124 aaKnown RBP9.76□□□□□ -0.85
HMGB3P4-201ENST00000428776 OR10J4P0C629 311 aa9.76□□□□□ -0.85
HMGB3P4-201ENST00000428776 GP9P14770 177 aa9.76□□□□□ -0.85
HMGB3P4-201ENST00000428776 CRYBB3P26998 211 aa9.76□□□□□ -0.85
HMGB3P4-201ENST00000428776 PROK1P58294 105 aa9.76□□□□□ -0.85
HMGB3P4-201ENST00000428776 UBE2L3P68036 154 aaKnown RBP9.76□□□□□ -0.85
HMGB3P4-201ENST00000428776 LEMD1Q68G75 181 aa9.76□□□□□ -0.85
HMGB3P4-201ENST00000428776 FXYD5Q96DB9 178 aa9.76□□□□□ -0.85
HMGB3P4-201ENST00000428776 METTL26Q96S19 204 aa9.76□□□□□ -0.85
HMGB3P4-201ENST00000428776 TXNDC17Q9BRA2 123 aa9.76□□□□□ -0.85
HMGB3P4-201ENST00000428776 C20orf24Q9BUV8 137 aa9.76□□□□□ -0.85
HMGB3P4-201ENST00000428776 TMEM231Q9H6L2 316 aa9.76□□□□□ -0.85
HMGB3P4-201ENST00000428776 SETD2Q9BYW2 2564 aaPredicted RBP9.75□□□□□ -0.85
HMGB3P4-201ENST00000428776 IGHV3OR16-8A0A075B7F1 116 aa9.75□□□□□ -0.85
HMGB3P4-201ENST00000428776 KRBOX1C9JBD0 128 aa9.75□□□□□ -0.85
HMGB3P4-201ENST00000428776 K7EMT4 169 aa9.75□□□□□ -0.85
HMGB3P4-201ENST00000428776 PYYP10082 97 aa9.75□□□□□ -0.85
HMGB3P4-201ENST00000428776 MEF2BQ02080 365 aaPredicted RBP9.75□□□□□ -0.85
HMGB3P4-201ENST00000428776 RPEL1Q2QD12 228 aa9.75□□□□□ -0.85
HMGB3P4-201ENST00000428776 C1orf194Q5T5A4 169 aa9.75□□□□□ -0.85
HMGB3P4-201ENST00000428776 RXFP4Q8TDU9 374 aa9.75□□□□□ -0.85
HMGB3P4-201ENST00000428776 TMEM190Q8WZ59 177 aa9.75□□□□□ -0.85
HMGB3P4-201ENST00000428776 NARS2Q96I59 477 aaKnown RBP9.75□□□□□ -0.85
HMGB3P4-201ENST00000428776 U3KQE9 123 aa9.75□□□□□ -0.85
HMGB3P4-201ENST00000428776 MAST4O15021 2626 aa9.75□□□□□ -0.85
HMGB3P4-201ENST00000428776 IGHV4OR15-8A0A075B7B6 117 aa9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 A0A087WW49 117 aa9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 A0A1W2PRE2 83 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms