RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 PLA2G2EQ9NZK7 142 aa11.09□□□□□ -0.63
SEC13-210ENST00000428626 IGHV3OR16-12A0A075B7B8 117 aa11.08□□□□□ -0.64
SEC13-210ENST00000428626 DUXBA0A1W2PPF3 345 aa11.08□□□□□ -0.64
SEC13-210ENST00000428626 SNRPGP15A8MWD9 76 aa11.08□□□□□ -0.64
SEC13-210ENST00000428626 GATA2P23769 480 aaPredicted RBP11.08□□□□□ -0.64
SEC13-210ENST00000428626 PSMB3P49720 205 aa11.08□□□□□ -0.64
SEC13-210ENST00000428626 EMP1P54849 157 aa11.08□□□□□ -0.64
SEC13-210ENST00000428626 PPP1R1AQ13522 171 aa11.08□□□□□ -0.64
SEC13-210ENST00000428626 C1orf194Q5T5A4 169 aa11.08□□□□□ -0.64
SEC13-210ENST00000428626 C1orf158Q8N1D5 194 aa11.08□□□□□ -0.64
SEC13-210ENST00000428626 VAMP1P23763 118 aa11.07□□□□□ -0.64
SEC13-210ENST00000428626 NUP62P37198 522 aaPredicted RBP11.07□□□□□ -0.64
SEC13-210ENST00000428626 PYDC2Q56P42 97 aa11.07□□□□□ -0.64
SEC13-210ENST00000428626 TOMM5Q8N4H5 51 aa11.07□□□□□ -0.64
SEC13-210ENST00000428626 OR4B1Q8NGF8 309 aa11.07□□□□□ -0.64
SEC13-210ENST00000428626 CLUHP3Q96NS8 147 aa11.07□□□□□ -0.64
SEC13-210ENST00000428626 SLC25A32Q9H2D1 315 aa11.07□□□□□ -0.64
SEC13-210ENST00000428626 PAIP2BQ9ULR5 123 aaKnown RBP11.07□□□□□ -0.64
SEC13-210ENST00000428626 A0A0J9YX75 114 aa11.06□□□□□ -0.64
SEC13-210ENST00000428626 SFT2D2O95562 160 aa11.06□□□□□ -0.64
SEC13-210ENST00000428626 SLC25A6P12236 298 aa11.06□□□□□ -0.64
SEC13-210ENST00000428626 ID1P41134 155 aa11.06□□□□□ -0.64
SEC13-210ENST00000428626 PAX9P55771 341 aa11.06□□□□□ -0.64
SEC13-210ENST00000428626 FAM78BQ5VT40 261 aa11.06□□□□□ -0.64
SEC13-210ENST00000428626 OR8I2Q8N0Y5 310 aa11.06□□□□□ -0.64
SEC13-210ENST00000428626 COQ8AQ8NI60 647 aa11.06□□□□□ -0.64
SEC13-210ENST00000428626 DYNC1H1Q14204 4646 aaKnown RBP11.06□□□□□ -0.64
SEC13-210ENST00000428626 A0A1B0GVY2 172 aa11.05□□□□□ -0.64
SEC13-210ENST00000428626 WRBO00258 174 aa11.05□□□□□ -0.64
SEC13-210ENST00000428626 ISLRO14498 428 aa11.05□□□□□ -0.64
SEC13-210ENST00000428626 SYNGR2O43760 224 aa11.05□□□□□ -0.64
SEC13-210ENST00000428626 HOXB5P09067 269 aa11.05□□□□□ -0.64
SEC13-210ENST00000428626 SPART-AS1P0CW21 52 aa11.05□□□□□ -0.64
SEC13-210ENST00000428626 FAUP35544 74 aaKnown RBP11.05□□□□□ -0.64
SEC13-210ENST00000428626 RAB11AP62491 216 aa11.05□□□□□ -0.64
SEC13-210ENST00000428626 FAM222AQ5U5X8 452 aa11.05□□□□□ -0.64
SEC13-210ENST00000428626 GGNBP1Q5YKI7 109 aa11.05□□□□□ -0.64
SEC13-210ENST00000428626 AMTNQ6UX39 209 aa11.05□□□□□ -0.64
SEC13-210ENST00000428626 CENPSQ8N2Z9 138 aa11.05□□□□□ -0.64
SEC13-210ENST00000428626 POM121L12Q8N7R1 296 aa11.05□□□□□ -0.64
SEC13-210ENST00000428626 PPP1R14BQ96C90 147 aa11.05□□□□□ -0.64
SEC13-210ENST00000428626 NDUFAF3Q9BU61 184 aa11.05□□□□□ -0.64
SEC13-210ENST00000428626 DKK2Q9UBU2 259 aa11.05□□□□□ -0.64
SEC13-210ENST00000428626 DNAH11Q96DT5 4516 aa11.05□□□□□ -0.64
SEC13-210ENST00000428626 PCLOQ9Y6V0 5065 aa11.04□□□□□ -0.64
SEC13-210ENST00000428626 PKD1P98161 4303 aa11.04□□□□□ -0.64
SEC13-210ENST00000428626 SMIM9A6NGZ8 99 aa11.04□□□□□ -0.64
SEC13-210ENST00000428626 ZNF98A6NK75 572 aa11.04□□□□□ -0.64
SEC13-210ENST00000428626 A8MTW9 85 aa11.04□□□□□ -0.64
SEC13-210ENST00000428626 H3BP45 60 aa11.04□□□□□ -0.64
SEC13-210ENST00000428626 PRM2P04554 102 aa11.04□□□□□ -0.64
SEC13-210ENST00000428626 FABP1P07148 127 aa11.04□□□□□ -0.64
SEC13-210ENST00000428626 PSG9Q00887 426 aa11.04□□□□□ -0.64
SEC13-210ENST00000428626 IGFL4Q6B9Z1 124 aa11.04□□□□□ -0.64
SEC13-210ENST00000428626 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.04□□□□□ -0.64
SEC13-210ENST00000428626 CCDC190Q86UF4 302 aa11.04□□□□□ -0.64
SEC13-210ENST00000428626 SLC25A22Q9H936 323 aa11.04□□□□□ -0.64
SEC13-210ENST00000428626 PFDN2Q9UHV9 154 aa11.04□□□□□ -0.64
SEC13-210ENST00000428626 TMED3Q9Y3Q3 217 aa11.04□□□□□ -0.64
SEC13-210ENST00000428626 RFNGQ9Y644 331 aa11.04□□□□□ -0.64
SEC13-210ENST00000428626 TRAV8-2A0A0B4J237 113 aa11.03□□□□□ -0.64
SEC13-210ENST00000428626 M0R2N4 97 aa11.03□□□□□ -0.64
SEC13-210ENST00000428626 RTL8CO15255 209 aa11.03□□□□□ -0.64
SEC13-210ENST00000428626 NOL3O60936 208 aaKnown RBP11.03□□□□□ -0.64
SEC13-210ENST00000428626 ADAP1O75689 374 aa11.03□□□□□ -0.64
SEC13-210ENST00000428626 AP3S2P59780 193 aa11.03□□□□□ -0.64
SEC13-210ENST00000428626 SPANXN5Q5MJ07 72 aa11.03□□□□□ -0.64
SEC13-210ENST00000428626 C16orf92Q96LL3 132 aa11.03□□□□□ -0.64
SEC13-210ENST00000428626 SLC25A21Q9BQT8 299 aaPredicted RBP11.03□□□□□ -0.64
SEC13-210ENST00000428626 RSG1Q9BU20 258 aa11.03□□□□□ -0.64
SEC13-210ENST00000428626 TMEM189A5PLL7 270 aa11.02□□□□□ -0.65
SEC13-210ENST00000428626 MED6O75586 246 aa11.02□□□□□ -0.65
SEC13-210ENST00000428626 CCNKO75909 580 aa11.02□□□□□ -0.65
SEC13-210ENST00000428626 P0DMU3 169 aa11.02□□□□□ -0.65
SEC13-210ENST00000428626 FAM231AP0DMU4 169 aa11.02□□□□□ -0.65
SEC13-210ENST00000428626 FAM231CP0DMU5 169 aa11.02□□□□□ -0.65
SEC13-210ENST00000428626 ORM2P19652 201 aa11.02□□□□□ -0.65
SEC13-210ENST00000428626 SPATA31B1PQ5VZV4 182 aa11.02□□□□□ -0.65
SEC13-210ENST00000428626 EBLN2Q6P2I7 272 aa11.02□□□□□ -0.65
SEC13-210ENST00000428626 ACOT7LQ6ZUV0 252 aa11.02□□□□□ -0.65
SEC13-210ENST00000428626 CIB3Q96Q77 187 aaPredicted RBP11.02□□□□□ -0.65
SEC13-210ENST00000428626 DOK5Q9P104 306 aa11.02□□□□□ -0.65
SEC13-210ENST00000428626 YTHDF2Q9Y5A9 579 aaKnown RBP11.02□□□□□ -0.65
SEC13-210ENST00000428626 NACAE9PAV3 2078 aa11.02□□□□□ -0.65
SEC13-210ENST00000428626 LOC102723971A0A1B0GUV8 181 aa11.01□□□□□ -0.65
SEC13-210ENST00000428626 PMS2P5A8MQ11 134 aa11.01□□□□□ -0.65
SEC13-210ENST00000428626 POLR2GP62487 172 aaKnown RBP eCLIP11.01□□□□□ -0.65
SEC13-210ENST00000428626 ID3Q02535 119 aa11.01□□□□□ -0.65
SEC13-210ENST00000428626 LINC00336Q6ZUF6 198 aa11.01□□□□□ -0.65
SEC13-210ENST00000428626 RNF182Q8N6D2 247 aa11.01□□□□□ -0.65
SEC13-210ENST00000428626 NIPSNAP3BQ9BS92 247 aa11.01□□□□□ -0.65
SEC13-210ENST00000428626 SRRQ9GZT4 340 aa11.01□□□□□ -0.65
SEC13-210ENST00000428626 RBM38Q9H0Z9 239 aaKnown RBP11.01□□□□□ -0.65
SEC13-210ENST00000428626 RPRMQ9NS64 109 aa11.01□□□□□ -0.65
SEC13-210ENST00000428626 SLC45A2Q9UMX9 530 aa11.01□□□□□ -0.65
SEC13-210ENST00000428626 FLVCR2Q9UPI3 526 aa11.01□□□□□ -0.65
SEC13-210ENST00000428626 PIGBOS1A0A0B4J2F0 54 aa11□□□□□ -0.65
SEC13-210ENST00000428626 C9orf170A2RU37 121 aa11□□□□□ -0.65
SEC13-210ENST00000428626 H3BRN7 92 aa11□□□□□ -0.65
SEC13-210ENST00000428626 CRXO43186 299 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms