RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 NDUFB4O95168 129 aa11.87□□□□□ -0.51
CALD1-206ENST00000424922 REG1AP05451 166 aa11.87□□□□□ -0.51
CALD1-206ENST00000424922 NPSP0C0P6 89 aa11.87□□□□□ -0.51
CALD1-206ENST00000424922 AREGP15514 252 aa11.87□□□□□ -0.51
CALD1-206ENST00000424922 DEFB112Q30KQ8 113 aa11.87□□□□□ -0.51
CALD1-206ENST00000424922 LINC01551Q86U37 167 aa11.87□□□□□ -0.51
CALD1-206ENST00000424922 C11orf52Q96A22 123 aa11.87□□□□□ -0.51
CALD1-206ENST00000424922 ELOA3CA0A087WX78 387 aaPredicted RBP11.86□□□□□ -0.51
CALD1-206ENST00000424922 IGLC7A0M8Q6 106 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 EREGO14944 169 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 FXYD3Q14802 87 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 LY6EQ16553 131 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 SPATA31B1PQ5VZV4 182 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 CDPF1Q6NVV7 123 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 IMMP2LQ96T52 175 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 TMEM167BQ9NRX6 74 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 IGKV1OR2-108A0A075B7D4 117 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 TEX22C9J3V5 150 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 OR10J1P30954 320 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 SUB1P53999 127 aaKnown RBP eCLIP11.86□□□□□ -0.51
CALD1-206ENST00000424922 NDUFA6P56556 154 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 CX3CL1P78423 397 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 BTF3L4Q96K17 158 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 RASL11BQ9BPW5 248 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 ATG101Q9BSB4 218 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 SLC25A33Q9BSK2 321 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 FAM103A1Q9BTL3 118 aaKnown RBP11.86□□□□□ -0.51
CALD1-206ENST00000424922 PRO1933Q9H354 126 aa11.86□□□□□ -0.51
CALD1-206ENST00000424922 TECRQ9NZ01 308 aaKnown RBP11.86□□□□□ -0.51
CALD1-206ENST00000424922 YTHDF2Q9Y5A9 579 aaKnown RBP11.86□□□□□ -0.51
CALD1-206ENST00000424922 OR5G3P0C626 314 aa11.85□□□□□ -0.51
CALD1-206ENST00000424922 ZNF562Q6V9R5 426 aa11.85□□□□□ -0.51
CALD1-206ENST00000424922 UHRF2Q96PU4 802 aa11.85□□□□□ -0.51
CALD1-206ENST00000424922 RNF2Q99496 336 aa11.85□□□□□ -0.51
CALD1-206ENST00000424922 LY96Q9Y6Y9 160 aa11.85□□□□□ -0.51
CALD1-206ENST00000424922 TYMSP04818 313 aa11.84□□□□□ -0.51
CALD1-206ENST00000424922 TRGC1P0CF51 173 aa11.84□□□□□ -0.51
CALD1-206ENST00000424922 KRTAP1-1Q07627 177 aa11.84□□□□□ -0.51
CALD1-206ENST00000424922 FAM78BQ5VT40 261 aa11.84□□□□□ -0.51
CALD1-206ENST00000424922 PQLC2Q6ZP29 291 aa11.84□□□□□ -0.51
CALD1-206ENST00000424922 MRPL41Q8IXM3 137 aaKnown RBP11.84□□□□□ -0.51
CALD1-206ENST00000424922 NUDT10Q8NFP7 164 aa11.84□□□□□ -0.51
CALD1-206ENST00000424922 FRZBQ92765 325 aa11.84□□□□□ -0.51
CALD1-206ENST00000424922 MRPL32Q9BYC8 188 aaKnown RBP11.84□□□□□ -0.51
CALD1-206ENST00000424922 RPLP1P05386 114 aaKnown RBP11.84□□□□□ -0.51
CALD1-206ENST00000424922 TAS2R45P59539 299 aa11.84□□□□□ -0.51
CALD1-206ENST00000424922 PVRIGQ6DKI7 326 aa11.84□□□□□ -0.51
CALD1-206ENST00000424922 KCNIP4Q6PIL6 250 aa11.84□□□□□ -0.51
CALD1-206ENST00000424922 IL17RELQ6ZVW7 336 aa11.84□□□□□ -0.51
CALD1-206ENST00000424922 MIR17HGQ75NE6 70 aa11.84□□□□□ -0.51
CALD1-206ENST00000424922 C5orf56Q8N8D9 126 aa11.84□□□□□ -0.51
CALD1-206ENST00000424922 ARPC1AQ92747 370 aa11.84□□□□□ -0.51
CALD1-206ENST00000424922 MOB4Q9Y3A3 225 aa11.84□□□□□ -0.51
CALD1-206ENST00000424922 OTOGQ6ZRI0 2925 aa11.84□□□□□ -0.51
CALD1-206ENST00000424922 IGHV7-81A0A0B4J1V7 117 aa11.83□□□□□ -0.52
CALD1-206ENST00000424922 SCO2A0A1W2PP80 73 aa11.83□□□□□ -0.52
CALD1-206ENST00000424922 SH2D7A6NKC9 451 aaPredicted RBP11.83□□□□□ -0.52
CALD1-206ENST00000424922 IFITM10A6NMD0 228 aa11.83□□□□□ -0.52
CALD1-206ENST00000424922 CD5LO43866 347 aa11.83□□□□□ -0.52
CALD1-206ENST00000424922 HLA-DRB1P01911 266 aa11.83□□□□□ -0.52
CALD1-206ENST00000424922 FAM3BP58499 235 aaPredicted RBP11.83□□□□□ -0.52
CALD1-206ENST00000424922 NDPQ00604 133 aa11.83□□□□□ -0.52
CALD1-206ENST00000424922 DMRTA1Q5VZB9 504 aa11.83□□□□□ -0.52
CALD1-206ENST00000424922 C19orf35Q6ZS72 473 aa11.83□□□□□ -0.52
CALD1-206ENST00000424922 C9orf139Q6ZV77 190 aa11.83□□□□□ -0.52
CALD1-206ENST00000424922 OR10D4PQ8NGN7 298 aa11.83□□□□□ -0.52
CALD1-206ENST00000424922 DERL1Q9BUN8 251 aa11.83□□□□□ -0.52
CALD1-206ENST00000424922 BAHCC1Q9P281 2608 aa11.83□□□□□ -0.52
CALD1-206ENST00000424922 A6NDX4 124 aa11.83□□□□□ -0.52
CALD1-206ENST00000424922 C9JCJ5 164 aa11.83□□□□□ -0.52
CALD1-206ENST00000424922 PPP5D1E7EU14 171 aa11.83□□□□□ -0.52
CALD1-206ENST00000424922 SNRPCP09234 159 aaKnown RBP11.83□□□□□ -0.52
CALD1-206ENST00000424922 HSPB9Q9BQS6 159 aa11.83□□□□□ -0.52
CALD1-206ENST00000424922 IGHV4-59P01825 116 aa11.82□□□□□ -0.52
CALD1-206ENST00000424922 PPBPP02775 128 aa11.82□□□□□ -0.52
CALD1-206ENST00000424922 THAP8Q8NA92 274 aa11.82□□□□□ -0.52
CALD1-206ENST00000424922 ELOVL1Q9BW60 279 aa11.82□□□□□ -0.52
CALD1-206ENST00000424922 SNHG12Q9BXW3 62 aa11.82□□□□□ -0.52
CALD1-206ENST00000424922 YAE1D1Q9NRH1 226 aa11.82□□□□□ -0.52
CALD1-206ENST00000424922 PSMB11A5LHX3 300 aa11.81□□□□□ -0.52
CALD1-206ENST00000424922 AMY1AP04745 511 aa11.81□□□□□ -0.52
CALD1-206ENST00000424922 FOXL1Q12952 345 aa11.81□□□□□ -0.52
CALD1-206ENST00000424922 MLANAQ16655 118 aa11.81□□□□□ -0.52
CALD1-206ENST00000424922 ZNF114Q8NC26 417 aa11.81□□□□□ -0.52
CALD1-206ENST00000424922 NECAP1Q8NC96 275 aa11.81□□□□□ -0.52
CALD1-206ENST00000424922 OR4X1Q8NH49 305 aa11.81□□□□□ -0.52
CALD1-206ENST00000424922 SRSF8Q9BRL6 282 aaKnown RBP11.81□□□□□ -0.52
CALD1-206ENST00000424922 PITPNC1Q9UKF7 332 aa11.81□□□□□ -0.52
CALD1-206ENST00000424922 RPH3ALQ9UNE2 315 aa11.81□□□□□ -0.52
CALD1-206ENST00000424922 TRBV20OR9-2A0A075B6H5 130 aa11.81□□□□□ -0.52
CALD1-206ENST00000424922 C8orf88P0DMB2 117 aa11.81□□□□□ -0.52
CALD1-206ENST00000424922 IER3P46695 156 aa11.81□□□□□ -0.52
CALD1-206ENST00000424922 MFAP2P55001 183 aa11.81□□□□□ -0.52
CALD1-206ENST00000424922 HIST3H2BBQ8N257 126 aa11.81□□□□□ -0.52
CALD1-206ENST00000424922 SFRP2Q96HF1 295 aa11.81□□□□□ -0.52
CALD1-206ENST00000424922 ZNF48Q96MX3 618 aaPredicted RBP11.81□□□□□ -0.52
CALD1-206ENST00000424922 EGR2P11161 476 aaPredicted RBP11.8□□□□□ -0.52
CALD1-206ENST00000424922 SELENOTP62341 195 aa11.8□□□□□ -0.52
CALD1-206ENST00000424922 OR2T6Q8NHC8 308 aa11.8□□□□□ -0.52
CALD1-206ENST00000424922 ZNF503Q96F45 646 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms