RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 SMIM8Q96KF7 97 aa9.51□□□□□ -0.89
VRK3-203ENST00000424804 RAB40CQ96S21 281 aa9.51□□□□□ -0.89
VRK3-203ENST00000424804 TRGV9Q99603 122 aa9.51□□□□□ -0.89
VRK3-203ENST00000424804 GPN1Q9HCN4 374 aaPredicted RBP9.51□□□□□ -0.89
VRK3-203ENST00000424804 AGRNO00468 2067 aa9.51□□□□□ -0.89
VRK3-203ENST00000424804 DNAH2Q9P225 4427 aa9.51□□□□□ -0.89
VRK3-203ENST00000424804 FAT2Q9NYQ8 4349 aa9.5□□□□□ -0.89
VRK3-203ENST00000424804 NUPR2A6NF83 97 aa9.5□□□□□ -0.89
VRK3-203ENST00000424804 SNRPGP15A8MWD9 76 aa9.5□□□□□ -0.89
VRK3-203ENST00000424804 PRSS46E5RG02 174 aa9.5□□□□□ -0.89
VRK3-203ENST00000424804 INMT-MINDY4F8WBC2 141 aa9.5□□□□□ -0.89
VRK3-203ENST00000424804 ZNF688P0C7X2 276 aa9.5□□□□□ -0.89
VRK3-203ENST00000424804 GATA2P23769 480 aaPredicted RBP9.5□□□□□ -0.89
VRK3-203ENST00000424804 PAX9P55771 341 aa9.5□□□□□ -0.89
VRK3-203ENST00000424804 C16orf54Q6UWD8 224 aa9.5□□□□□ -0.89
VRK3-203ENST00000424804 RPP25LQ8N5L8 163 aaKnown RBP9.5□□□□□ -0.89
VRK3-203ENST00000424804 STPG3Q8N7X2 389 aa9.5□□□□□ -0.89
VRK3-203ENST00000424804 C2orf50Q96LR7 162 aa9.5□□□□□ -0.89
VRK3-203ENST00000424804 MGAT4CQ9UBM8 478 aa9.5□□□□□ -0.89
VRK3-203ENST00000424804 PFDN2Q9UHV9 154 aa9.5□□□□□ -0.89
VRK3-203ENST00000424804 IGKV1OR2-108A0A075B7D4 117 aa9.49□□□□□ -0.89
VRK3-203ENST00000424804 C7orf66A4D0T2 115 aa9.49□□□□□ -0.89
VRK3-203ENST00000424804 GOSR2O14653 212 aa9.49□□□□□ -0.89
VRK3-203ENST00000424804 SIX6O95475 246 aa9.49□□□□□ -0.89
VRK3-203ENST00000424804 IL5P05113 134 aa9.49□□□□□ -0.89
VRK3-203ENST00000424804 ORM2P19652 201 aa9.49□□□□□ -0.89
VRK3-203ENST00000424804 CAV2P51636 162 aa9.49□□□□□ -0.89
VRK3-203ENST00000424804 SIGLEC15Q6ZMC9 328 aa9.49□□□□□ -0.89
VRK3-203ENST00000424804 THAP8Q8NA92 274 aa9.49□□□□□ -0.89
VRK3-203ENST00000424804 BPIFCQ8NFQ6 507 aa9.49□□□□□ -0.89
VRK3-203ENST00000424804 OR10P1Q8NGE3 313 aa9.49□□□□□ -0.89
VRK3-203ENST00000424804 GLMPQ8WWB7 406 aa9.49□□□□□ -0.89
VRK3-203ENST00000424804 DOK5Q9P104 306 aa9.49□□□□□ -0.89
VRK3-203ENST00000424804 U3KQE9 123 aa9.49□□□□□ -0.89
VRK3-203ENST00000424804 K7EPK0 472 aa9.48□□□□□ -0.89
VRK3-203ENST00000424804 K7EQG2 157 aa9.48□□□□□ -0.89
VRK3-203ENST00000424804 BUB3O43684 328 aa9.48□□□□□ -0.89
VRK3-203ENST00000424804 TSC22D2O75157 780 aa9.48□□□□□ -0.89
VRK3-203ENST00000424804 PVALBP20472 110 aaPredicted RBP9.48□□□□□ -0.89
VRK3-203ENST00000424804 AP2S1P53680 142 aaPredicted RBP9.48□□□□□ -0.89
VRK3-203ENST00000424804 TMEM14EPQ6UXP3 125 aa9.48□□□□□ -0.89
VRK3-203ENST00000424804 OR1B1Q8NGR6 318 aa9.48□□□□□ -0.89
VRK3-203ENST00000424804 PHLDA1Q8WV24 401 aaPredicted RBP9.48□□□□□ -0.89
VRK3-203ENST00000424804 CSTL1Q9H114 145 aa9.48□□□□□ -0.89
VRK3-203ENST00000424804 SLC25A22Q9H936 323 aa9.48□□□□□ -0.89
VRK3-203ENST00000424804 TRAV2A0A0B4J234 112 aa9.47□□□□□ -0.89
VRK3-203ENST00000424804 PMS2P5A8MQ11 134 aa9.47□□□□□ -0.89
VRK3-203ENST00000424804 NUP62P37198 522 aaPredicted RBP9.47□□□□□ -0.89
VRK3-203ENST00000424804 TAS2R30P59541 319 aa9.47□□□□□ -0.89
VRK3-203ENST00000424804 DLK1P80370 383 aa9.47□□□□□ -0.89
VRK3-203ENST00000424804 RAB32Q13637 225 aa9.47□□□□□ -0.89
VRK3-203ENST00000424804 PSMG4Q5JS54 123 aa9.47□□□□□ -0.89
VRK3-203ENST00000424804 TMEM182Q6ZP80 229 aaPredicted RBP9.47□□□□□ -0.89
VRK3-203ENST00000424804 CYP2G1PQ6ZSU1 146 aa9.47□□□□□ -0.89
VRK3-203ENST00000424804 STHQ8IWL8 128 aa9.47□□□□□ -0.89
VRK3-203ENST00000424804 TMEM147Q9BVK8 224 aa9.47□□□□□ -0.89
VRK3-203ENST00000424804 FAM24AA6NFZ4 105 aa9.46□□□□□ -0.9
VRK3-203ENST00000424804 KNCNA6PVL3 124 aa9.46□□□□□ -0.9
VRK3-203ENST00000424804 SSNA1O43805 119 aa9.46□□□□□ -0.9
VRK3-203ENST00000424804 PRAF2O60831 178 aa9.46□□□□□ -0.9
VRK3-203ENST00000424804 DEDDO75618 318 aa9.46□□□□□ -0.9
VRK3-203ENST00000424804 CST7O76096 145 aa9.46□□□□□ -0.9
VRK3-203ENST00000424804 GIG44P09565 113 aaPredicted RBP9.46□□□□□ -0.9
VRK3-203ENST00000424804 ARL16Q0P5N6 197 aa9.46□□□□□ -0.9
VRK3-203ENST00000424804 LRRC37A5PQ49AS3 106 aa9.46□□□□□ -0.9
VRK3-203ENST00000424804 TMEM144Q7Z5S9 345 aa9.46□□□□□ -0.9
VRK3-203ENST00000424804 OR8I2Q8N0Y5 310 aa9.46□□□□□ -0.9
VRK3-203ENST00000424804 TMEM217Q8N7C4 229 aa9.46□□□□□ -0.9
VRK3-203ENST00000424804 DCANP1Q8TF63 244 aa9.46□□□□□ -0.9
VRK3-203ENST00000424804 NPVFQ9HCQ7 196 aa9.46□□□□□ -0.9
VRK3-203ENST00000424804 NRN1Q9NPD7 142 aa9.46□□□□□ -0.9
VRK3-203ENST00000424804 KIAA1109Q2LD37 5005 aa9.46□□□□□ -0.9
VRK3-203ENST00000424804 CFDP00746 253 aaPredicted RBP9.45□□□□□ -0.9
VRK3-203ENST00000424804 CA1P00915 261 aaPredicted RBP9.45□□□□□ -0.9
VRK3-203ENST00000424804 OR5G3P0C626 314 aa9.45□□□□□ -0.9
VRK3-203ENST00000424804 NANOS2P60321 138 aaKnown RBP9.45□□□□□ -0.9
VRK3-203ENST00000424804 RAP2BP61225 183 aa9.45□□□□□ -0.9
VRK3-203ENST00000424804 SNRPD3P62318 126 aaKnown RBP9.45□□□□□ -0.9
VRK3-203ENST00000424804 PRR20EP86478 221 aa9.45□□□□□ -0.9
VRK3-203ENST00000424804 PRR20CP86479 221 aa9.45□□□□□ -0.9
VRK3-203ENST00000424804 PRR20DP86480 221 aa9.45□□□□□ -0.9
VRK3-203ENST00000424804 PRR20BP86481 221 aa9.45□□□□□ -0.9
VRK3-203ENST00000424804 PRR20AP86496 221 aa9.45□□□□□ -0.9
VRK3-203ENST00000424804 SLC38A11Q08AI6 406 aa9.45□□□□□ -0.9
VRK3-203ENST00000424804 ACTL10Q5JWF8 245 aa9.45□□□□□ -0.9
VRK3-203ENST00000424804 LGALS9CQ6DKI2 356 aa9.45□□□□□ -0.9
VRK3-203ENST00000424804 GATAD1Q8WUU5 269 aa9.45□□□□□ -0.9
VRK3-203ENST00000424804 FBXL17Q9UF56 701 aa9.45□□□□□ -0.9
VRK3-203ENST00000424804 KLK5Q9Y337 293 aaPredicted RBP9.45□□□□□ -0.9
VRK3-203ENST00000424804 LINC00869P0C866 280 aa9.44□□□□□ -0.9
VRK3-203ENST00000424804 TEPPQ6URK8 271 aa9.44□□□□□ -0.9
VRK3-203ENST00000424804 LINC00052Q96N35 136 aa9.44□□□□□ -0.9
VRK3-203ENST00000424804 RARRES2Q99969 163 aa9.44□□□□□ -0.9
VRK3-203ENST00000424804 ARL6Q9H0F7 186 aa9.44□□□□□ -0.9
VRK3-203ENST00000424804 C11orf68Q9H3H3 251 aaKnown RBP9.44□□□□□ -0.9
VRK3-203ENST00000424804 DYNC1H1Q14204 4646 aaKnown RBP9.44□□□□□ -0.9
VRK3-203ENST00000424804 RLN2P04090 185 aa9.43□□□□□ -0.9
VRK3-203ENST00000424804 FGL1Q08830 312 aa9.43□□□□□ -0.9
VRK3-203ENST00000424804 STX12Q86Y82 276 aa9.43□□□□□ -0.9
VRK3-203ENST00000424804 OR11H2Q8NH07 326 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms